CF421339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF421339 vs. ExPASy Swiss-Prot
Match: FA18_ARATH (Uncharacterized FAM18-like protein At1g09330 OS=Arabidopsis thaliana GN=At1g09330 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.277e-44 Identity = 88/108 (81.48%), Postives = 92/108 (85.19%), Query Frame = 3 Query: 129 RHAFFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILXGLRWWNEINDMGESVWKFECLDHESMARMNXKDSWLXXGTLYLSAVLGXXLGYF 452 R FHVLFKGAALAFYILSALFF+SFVIIFVVTVLLAALDFWVVKNVSGRIL GLRWWNEIND+GESVWKFE LD ES+ARMN KDSWL TLYL+A LG F Sbjct: 18 RTCLFHVLFKGAALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLARMNKKDSWLFWWTLYLAAAAWFILGVF 125
BLAST of CF421339 vs. ExPASy Swiss-Prot
Match: FA18_DROME (Uncharacterized FAM18-like protein CG5021 OS=Drosophila melanogaster GN=CG5021 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 4.325e-19 Identity = 49/117 (41.88%), Postives = 66/117 (56.41%), Query Frame = 3 Query: 138 FFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILXGLRWWNEINDMGESVWKFECLDHES-MARMNXKDS---WL-------XXGTLYLSAVLGXXLGYFL 455 FFH+ F+GAA+ Y+ F DSF+ FV VL + DFW VKN+SGR+L GLRWWN ++D G S W FE + ES +R+N + WL G +L A+ G + L Sbjct: 42 FFHLFFRGAAILIYMFCGWFSDSFITSFVFVVLFLSADFWTVKNISGRLLVGLRWWNYVDDDGVSHWVFESKNSESYQSRVNKNEQRIFWLGLILCPVFWGLFFLFALFGLKFKWLL 158
BLAST of CF421339 vs. ExPASy Swiss-Prot
Match: TVP23_YARLI (Golgi apparatus membrane protein TVP23 OS=Yarrowia lipolytica GN=TVP23 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 4.782e-18 Identity = 46/97 (47.42%), Postives = 62/97 (63.92%), Query Frame = 3 Query: 141 FHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILXGLRWWNEINDMGESVWKFECLDHESMARMNXKDSWLXXGTLYLSAVL 431 F + F+ AL Y+ LF D FV++FV+ VLL A DFW VKN++GR++ GLRWWNE ++ GESVW FE D + +N DS + LY + VL Sbjct: 18 FFLAFRLGALFTYMFGLLFTDKFVLMFVLVVLLLAADFWNVKNIAGRLMVGLRWWNEASETGESVWVFETADPQRY--INPIDSKVFWMMLYGAPVL 112
BLAST of CF421339 vs. ExPASy Swiss-Prot
Match: YC2L_CAEEL (Uncharacterized FAM18-like protein C34D4.4 OS=Caenorhabditis elegans GN=C34D4.4 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.905e-17 Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 3 Query: 144 HVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILXGLRWWNEINDMGESVWKFE-CLDHESMARMNXKDSWL 398 H+ FKGAAL FY + F +SF++ F+V + L ++DFW VKN++GR+L GLRWWN ++ G + WKFE D A ++ + WL Sbjct: 79 HLSFKGAALFFYFFANFFTNSFIVQFLVILTLLSMDFWTVKNITGRLLVGLRWWNFVDADGNNHWKFESAKDMTRFATIDRRVFWL 164
BLAST of CF421339 vs. ExPASy Swiss-Prot
Match: FA18A_DICDI (Uncharacterized FAM18-like protein 1 OS=Dictyostelium discoideum GN=DDB_G0276319 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.538e-16 Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 3 Query: 75 DSRNGSQSASW*KLCRTQRH---AFFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILXGLRWWNEINDMGESVWKFECLDHES 365 D+ N Q++ +H FFH+ FK A+A +ILS+ FV+ F++ L +A DFWV KNV+GR L GLRWWN+I + G + W FE + +S Sbjct: 14 DNNNNGQNSESQPQSNAPKHPISVFFHLFFKIVAVAIFILSSFVNIGFVLTFIIVTLSSAFDFWVTKNVTGRKLVGLRWWNQIKEDGTNNWVFESVQDKS 113
BLAST of CF421339 vs. ExPASy Swiss-Prot
Match: FA18B_BOVIN (Protein FAM18B OS=Bos taurus GN=FAM18B PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.624e-16 Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = 3 Query: 135 AFFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILXGLRWWNEINDMGESVWKFE 347 +FFH+ F+ +A+ Y+L LF SF+ V +LL + DFW VKNV+GR++ GLRWWN I++ G+S W FE Sbjct: 37 SFFHLFFRVSAIIVYLLCELFSSSFIACMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFE 107
BLAST of CF421339 vs. ExPASy Swiss-Prot
Match: TVP23_LACBS (Golgi apparatus membrane protein TVP23 OS=Laccaria bicolor (strain S238N-H82) GN=TVP23 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 7.634e-16 Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 3 Query: 138 FFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILXGLRWWNEINDMGESVWKFECLDHESMARMNXKDSWLXXGTLYLSAVL 431 FF LF+ AA+A YIL F D++V+ V V+L A+DFW +NVSGR L GLR+WN++++ GES W FE D A N DS + LY+ +L Sbjct: 92 FFLYLFRIAAIAVYILCGWFTDNYVLSTVAVVVLLAMDFWNCRNVSGRTLVGLRFWNQVDEDGESYWVFESRDPSRPA--NPIDSKMFWIALYVFPLL 187
BLAST of CF421339 vs. ExPASy Swiss-Prot
Match: FA18B_MOUSE (Protein FAM18B OS=Mus musculus GN=Fam18b PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 7.634e-16 Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 3 Query: 135 AFFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILXGLRWWNEINDMGESVWKFEC-----LDHESMARMNXKDSWL 398 +FFH+ F+ +A+ Y+L L SF+ V +LL + DFW VKNV+GR++ GLRWWN I++ G+S W FE D+++++ + WL Sbjct: 37 SFFHLFFRVSAVVVYLLCELLSSSFIACMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKSTPQDNKTISEAESRIFWL 129
BLAST of CF421339 vs. ExPASy Swiss-Prot
Match: FA18A_HUMAN (Protein FAM18A OS=Homo sapiens GN=FAM18A PE=2 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 7.634e-16 Identity = 37/70 (52.86%), Postives = 51/70 (72.86%), Query Frame = 3 Query: 138 FFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILXGLRWWNEINDMGESVWKFE 347 FFH+ F+ +A+ Y+ F SFV FV+ +LL +LDFW VKNV+GR+L GLRWWN+I++ G+S W FE Sbjct: 36 FFHLFFRVSAIVTYVSCDWFSKSFVGCFVMVLLLLSLDFWSVKNVTGRLLVGLRWWNQIDEDGKSHWIFE 105
BLAST of CF421339 vs. ExPASy Swiss-Prot
Match: TVP23_SCHPO (Golgi apparatus membrane protein tvp23 OS=Schizosaccharomyces pombe GN=tvp23 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 9.970e-16 Identity = 47/103 (45.63%), Postives = 58/103 (56.31%), Query Frame = 3 Query: 138 FFHVLFKGAALAFYILSALFFDSFVIIFVVTVLLAALDFWVVKNVSGRILXGLRWWNEINDMGESVWKFECLDHESMARMNXKDSWLXXGTLYLSAVLGXXLG 446 FF +LF+ A+ YIL F SF+++F+V L A+D W VKNVSGR+L GLRW NE GES+W FE D S R N D LYL + LG Sbjct: 52 FFFLLFRTGAIVAYILGMFFTSSFMLLFIVIFTLLAVDLWTVKNVSGRLLVGLRWRNETGVDGESIWIFESAD-PSRPR-NAVDQKTFWYALYLYPFIWIILG 152 The following BLAST results are available for this feature:
BLAST of CF421339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CF421339 ID=CF421339; Name=CF421339; organism=Citrus trifoliata; type=EST; length=462bpback to top |