FE896207

Overview
NameFE896207
Unique NameFE896207
TypeEST
OrganismCitrus trifoliata ()
Sequence length796
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE896207 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 3.454e-14
Identity = 70/222 (31.53%), Postives = 107/222 (48.20%), Query Frame = 3
Query:   51 MKTSLVTTLSFL----ILALVTKPQLGASES--EPILDVYGNQVDSSHRYYLVSALWGVKTGGGISVD-KGKNGQ--CPTDVIQLRPKDKRGKNLVLLPYD-NSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVNNDNASLGKQFITIGEGK------TCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNGSCDTLCKDVGI-SNVDGVQRLVVVD 665
            MK   + +LSF     +LA    P L A++S   P+LD+ G ++ +   YY+V  L     GGG++V     NG   CP  V+Q R +    + L   P +    +VR ST++ + FS      +    ++W+++  + S G+ F+TIG  K      T  + FK+E+   S F           YK+V C T V GSC   C DVGI  +  G +RL + D
Sbjct:    1 MKELTMLSLSFFFVSALLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVL--RDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPC-RWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGF-----------YKLVFCPT-VCGSCKVKCGDVGIYIDQKGRRRLALSD 207          
BLAST of FE896207 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.819e-13
Identity = 58/218 (26.61%), Postives = 107/218 (49.08%), Query Frame = 3
Query:   51 MKTSLVTTLSFLILALVTKPQ---LGASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISVDKGKNGQCPTDVIQLRPKDKRGKNLVLLPYDN-STIVRESTNIKLKFSRVSSLQQCNKDSLWKVNNDNASLGKQFITIGEGK------TCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNGSCDTLCKDVGISNVDGVQRLVVVDDND 674
            MKT+  T +  L+ A  +K     +  + + P+LD  G+++ +  +YY++S++ G   GGG+++ +     CP  V+Q R     G  ++    D+   +VR ST++ ++F  +   + C+  ++W+++N + S GK ++T    K      T  + FK+EK                 YK   C + V  SC TLC D+G  + D  Q  + + DN+
Sbjct:    1 MKTA--TAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGA-GGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD-RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGV------------LGYKFRFCPS-VCDSCTTLCSDIGRHSDDDGQIRLALSDNE 201          
BLAST of FE896207 vs. ExPASy Swiss-Prot
Match: SPORB_IPOBA (Sporamin B OS=Ipomoea batatas GN=GSPO-B1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.668e-11
Identity = 46/144 (31.94%), Postives = 78/144 (54.17%), Query Frame = 3
Query:  120 ASESEPILDVYGNQVDSSHRYYLVSALWGVKTGG--GISVDKGKNGQCPTDVIQLRPKDKRGKNLVLLPYD-NSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVNNDNASLGKQFITIGE-GKTCQNLFKLEKVSASIFDMKIA 539
            AS   P+LD+ G++V +   YY+VSA+WG   GG   + +D   N +C +DVI  R     G  + + P D  +T+V  ST    +F+ +++ + C  +  W + +D+ S G+ F+  GE      N FK+E V+ ++   KI+
Sbjct:   35 ASSETPVLDINGDEVRAGENYYIVSAIWGAGGGGLRLVRLDSSSN-ECASDVIVSRSDFDNGDPITITPADPEATVVMPSTYQTFRFN-IATNKLCVNNVNWGIKHDSES-GQYFVKAGEFVSDNSNQFKIEVVNDNLNAYKIS 175          
BLAST of FE896207 vs. ExPASy Swiss-Prot
Match: SPOR2_IPOBA (Sporamin B OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.668e-11
Identity = 46/144 (31.94%), Postives = 78/144 (54.17%), Query Frame = 3
Query:  120 ASESEPILDVYGNQVDSSHRYYLVSALWGVKTGG--GISVDKGKNGQCPTDVIQLRPKDKRGKNLVLLPYD-NSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVNNDNASLGKQFITIGE-GKTCQNLFKLEKVSASIFDMKIA 539
            AS   P+LD+ G++V +   YY+VSA+WG   GG   + +D   N +C +DVI  R     G  + + P D  +T+V  ST    +F+ +++ + C  +  W + +D+ S G+ F+  GE      N FK+E V+ ++   KI+
Sbjct:   35 ASSETPVLDINGDEVRAGENYYMVSAIWGAGGGGLRLVRLDSSSN-ECASDVIVSRSDFDNGDPITITPADPEATVVMPSTYQTFRFN-IATNKLCVNNVNWGIKHDSES-GQYFVKAGEFVSDNSNQFKIEVVNDNLNAYKIS 175          
The following BLAST results are available for this feature:
BLAST of FE896207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
MIRA_RICDU3.454e-1431.53Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
ASP_THECC3.819e-1326.6121 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
SPORB_IPOBA4.668e-1131.94Sporamin B OS=Ipomoea batatas GN=GSPO-B1 PE=2 SV=1[more]
SPOR2_IPOBA4.668e-1131.94Sporamin B OS=Ipomoea batatas PE=2 SV=1[more]
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Properties
Property NameValue
Genbank description1SSH115 juvenile early flowering trifoliate orange mutant subtracted cDNA library Citrus trifoliata cDNA clone SSH115, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE896207 ID=FE896207; Name=FE896207; organism=Citrus trifoliata; type=EST; length=796bp
TAGCGTGGTCGCGGCCGAGGTCAGCTATCCTAAAAAAAAAAATAAAACAA
ATGAAGACTTCCTTAGTAACAACACTCTCCTTCCTTATACTTGCTTTGGT
CACAAAACCTCAGTTGGGCGCCTCAGAATCTGAACCTATCTTAGATGTCT
ATGGCAACCAGGTGGACTCCAGCCACAGGTATTATCTTGTCTCAGCACTC
TGGGGAGTTAAAACCGGCGGTGGAATTAGCGTGGACAAAGGCAAAAATGG
ACAGTGTCCAACGGATGTTATCCAATTACGTCCTAAGGACAAAAGGGGAA
AGAATTTAGTTTTACTTCCGTATGACAATTCCACAATTGTCCGGGAGTCC
ACTAATATTAAATTGAAATTCTCAAGAGTTTCTTCTCTTCAGCAGTGTAA
CAAAGATTCGTTGTGGAAAGTAAACAACGATAACGCTTCATTAGGAAAGC
AGTTTATAACAATCGGTGAAGGTAAAACATGTCAAAATTTGTTTAAACTT
GAGAAAGTTAGTGCATCAATATTTGATATGAAAATAGCTCTAGACATTCC
CTGTCTATACAAAATTGTTCATTGTTCAACACCTGTTAATGGTTCTTGCG
ATACACTCTGCAAAGACGTTGGCATTTCTAATGTGGATGGCGTCCAACGC
CTAGTTGTGGTTGATGATAATGATCAGCCAAATCTGCCTTTGCCTGTTGT
GTTGTTCCAGCTGATAGGGGAAGATCTATATTATTTCCGTCTCTGTAATG
AATAAGCCAGCAGGCTGTATTATTCTAAATAATGGACCAGGCTAGT
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