FE896220
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 1.585e-45 Identity = 79/114 (69.30%), Postives = 92/114 (80.70%), Query Frame = 2 Query: 20 RYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC 361 ++PC PGK YYGRGP+Q++ N NYG AGK IGFDGLR P+ VA+DP +SFKTALWFWM NVH VM+QGFGATI+ INGA+EC GK P V AR+ YYKDYC +FGV PG NL C Sbjct: 172 QWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.703e-45 Identity = 79/114 (69.30%), Postives = 92/114 (80.70%), Query Frame = 2 Query: 20 RYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC 361 ++PC PGK YYGRGP+Q++ N NYG AG+ IGFDGLR P+ VA+DP +SFKTALWFWM NVH VM QGFGATI+ INGA+EC GK P V AR+ YYKDYC +FGVDPG NL C Sbjct: 175 QWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMNNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.175e-40 Identity = 72/114 (63.16%), Postives = 88/114 (77.19%), Query Frame = 2 Query: 20 RYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC 361 ++PC G+ YYGRGP+Q++ N NYG AG+ IGF+GL P VA+D V++FKTALWFWM NVH VM QGFGATI+ INGA+EC G PAQ+ AR+ YYK YC + VDPGPNL C Sbjct: 167 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMNNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.216e-39 Identity = 73/117 (62.39%), Postives = 85/117 (72.65%), Query Frame = 2 Query: 11 RPGRYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC 361 + +YPC GK YYGRGP+QL+ N NY AG+AIGFDGL PE VA D SFK A+WFWMTNVH VMNQGFGAT + INGA+EC G+ Q RI++YK YC FGV PG NL+C Sbjct: 172 KAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMTNVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.895e-39 Identity = 69/114 (60.53%), Postives = 88/114 (77.19%), Query Frame = 2 Query: 20 RYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC 361 ++PC G+ YYGRGP+Q++ N NYG AG+AIGFDGL P VA+D VV+FK ALWFWM +VH V+ QGFGAT + + A+ECGG PAQ+ AR+ YY+ YC + GVDPGPNL+C Sbjct: 156 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNSVHGVVPQGFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.895e-39 Identity = 73/114 (64.04%), Postives = 86/114 (75.44%), Query Frame = 2 Query: 20 RYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC 361 +YPC K Y+GRGPIQL+ N NYG AG A FDGL APETV+ D VVSFKTALW+WM +V PV+NQGFGATI+ INGA+EC G P VQAR+ YY +YC + GV G NL+C Sbjct: 157 QYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRPVINQGFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 3.200e-38 Identity = 68/116 (58.62%), Postives = 89/116 (76.72%), Query Frame = 2 Query: 20 RYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP--VMNQGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC 361 ++PC+ GK YYGRGP+Q++ N NYG AG++IGFDGL P+ VA+ PV++F+TALW+W NVH V QGFGATI+ INGA+EC GK P V R+ YY+ +C +FGVDPG NL+C Sbjct: 156 QWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 4.180e-38 Identity = 69/114 (60.53%), Postives = 86/114 (75.44%), Query Frame = 2 Query: 20 RYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC 361 +YPC PGK Y+GRGPIQL+ N NYGA G+++ + L PE V+ +P V+F+T LWFWM +V PV+NQGFGATI+ ING +EC G V ARI YY+DYC + GVDPGPNLSC Sbjct: 156 QYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAING-MECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 2.009e-32 Identity = 65/118 (55.08%), Postives = 83/118 (70.34%), Query Frame = 2 Query: 20 RYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWM-TNVHPVM---NQGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC 361 +YPC P K Y+GRGP+QL+ N NY AGK + FDGL P+ V +DP++SFKT+LWFW+ V V+ NQGFGATI+ ING EC G AQ+ AR+ YY++YC + GV PG NL C Sbjct: 133 QYPCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.146e-30 Identity = 69/137 (50.36%), Postives = 81/137 (59.12%), Query Frame = 2 Query: 20 RYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC*N 367 ++PC PGK YYGRGPIQL+ N NYG AG+AIG D LR P+ VA DP VSFKTALWFWMT + H V+ GFG ING +ECG Q ++V RI +YK YC+ GV G NL C N Sbjct: 125 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYN 261 The following BLAST results are available for this feature:
BLAST of FE896220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FE896220 ID=FE896220; Name=FE896220; organism=Citrus trifoliata; type=EST; length=396bpback to top |