GE213229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK2_TOBAC (Nucleoside diphosphate kinase 2, chloroplastic OS=Nicotiana tabacum GN=NDPK2 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 4.675e-34 Identity = 77/148 (52.03%), Postives = 96/148 (64.86%), Query Frame = 1 Query: 7 VVAAEVSSPTLVGKISCSRRLSYSSNKLTLRTTSHLAAFHPQSHLFVKFPPCPQRKTVARNSNETGIFLPHLVASMEQVEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 V ++ +SSPT ++SC+ N + + HLAAF P HLF R ++ ++ T IFLPHLVASME+VEETYIM+KPDGVQRGLVG+IISRFE CPK+LAEEHYKDL SKPFFPKLI+Y+ P+ Sbjct: 13 VSSSALSSPT--SRLSCAPSCKLILNPI--KKNHHLAAFQPAVHLFASNQ---SRSHASKRNHTTRIFLPHLVASMEEVEETYIMIKPDGVQRGLVGEIISRFEKKGFKLTGLKLFHCPKELAEEHYKDLQSKPFFPKLIDYITSGPV 153
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK2_ARATH (Nucleoside diphosphate kinase II, chloroplastic OS=Arabidopsis thaliana GN=NDPK2 PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 5.715e-32 Identity = 73/125 (58.40%), Postives = 87/125 (69.60%), Query Frame = 1 Query: 76 SSNKLTLRTTSHLAAFHPQSHLFVKFPPCPQRKTVARNSNETGIFLPHLVASMEQVEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 S ++ RT LAAF PQ LF + +R+ A +S E+GIFLPHLVASME VEETYIMVKPDG+QRGLVG+IISRFE QCPK+LAEEHYKDL++K FFP LIEY+ P+ Sbjct: 31 SPARVNFRTA--LAAFRPQFRLFSR-NSASRRRLRASSSAESGIFLPHLVASMEDVEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIEYITSGPV 152
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK2_SPIOL (Nucleoside diphosphate kinase 2, chloroplastic OS=Spinacia oleracea GN=NDPK2 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 6.319e-31 Identity = 74/143 (51.75%), Postives = 88/143 (61.54%), Query Frame = 1 Query: 52 SCSRRLSYSSNKLT------LRTTSH----LAAFHPQSHLFVKFPPCPQRKTVARNSNETGIFLPHLVASMEQVEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 +C L +SS+ T R +H LAAFH QSHLF P + S + IFLPHLVASMEQVEETYIM+KPDGVQRGLVG+IISRFE CPK+LAEEHYKDL +K F+ KLI+Y+ P+ Sbjct: 12 NCISSLPHSSSTTTRHQNLLFRRNNHHQQKLAAFHSQSHLFSTKCPLISHSLPRKKSFKPHIFLPHLVASMEQVEETYIMIKPDGVQRGLVGEIISRFEKKGFKLIGLKMYPCPKELAEEHYKDLKAKSFYQKLIDYITSGPV 154
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK2_PEA (Nucleoside diphosphate kinase 2, chloroplastic OS=Pisum sativum GN=NDPK2 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.192e-29 Identity = 67/121 (55.37%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 94 LRTTSHLAAFHPQSHLFVKFPPCPQRKTV--ARNSNETGIFLPHLVASMEQVEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 LRTT +L+AF +SHLF R+S E+GIFLP L+ S+EQV++ YIMVKPDGVQRGLVG+IISRFE QC K+LAEEHYK LN K FFPKLIEY+ P+ Sbjct: 31 LRTTQNLSAFSSKSHLFSPSSTSSSYPKTFRTRSSTESGIFLPRLITSLEQVDQAYIMVKPDGVQRGLVGEIISRFEKKGFKLTGLKLFQCSKELAEEHYKHLNQKSFFPKLIEYITSGPV 151
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK1_ORYSJ (Nucleoside diphosphate kinase 1 OS=Oryza sativa subsp. japonica GN=NDKR PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.150e-14 Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 1 Query: 241 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 +E+++IM+KPDGVQRGL+GDIISRFE + A++HY DL+ KPFFP L+EY+ P+ Sbjct: 1 MEQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEYIISGPV 70
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK1_ORYSI (Nucleoside diphosphate kinase 1 OS=Oryza sativa subsp. indica GN=NDKR PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.150e-14 Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 1 Query: 241 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 +E+++IM+KPDGVQRGL+GDIISRFE + A++HY DL+ KPFFP L+EY+ P+ Sbjct: 1 MEQSFIMIKPDGVQRGLIGDIISRFEKKGFFLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEYIISGPV 70
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK_GINCI (Nucleoside diphosphate kinase (Fragment) OS=Ginglymostoma cirratum PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.374e-14 Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 1 Query: 244 EETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 E T+I VKPDGVQR +VG++I RFE Q PKDL E+HY +L+ KPF+PKLI+Y+ P+ Sbjct: 4 ERTFIAVKPDGVQRCIVGEVIKRFEQKGFKLVAMKFLQAPKDLLEKHYCELSDKPFYPKLIKYMSSGPV 72
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK1_SPIOL (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.197e-13 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 1 Query: 241 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 +E+T+IM+KPDGVQRGLVG+IISRFE + AE+HY DL++KPFF L+EY+ P+ Sbjct: 1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFVNVDRPFAEKHYADLSAKPFFNGLVEYIVSGPV 70
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum GN=NDKP1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.197e-13 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 1 Query: 241 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 +E+T+IM+KPDGVQRGLVG+IISRFE + AE+HY DL++KPFF L+EY+ P+ Sbjct: 1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFINVDRPFAEKHYADLSAKPFFNGLVEYIVSGPV 70
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK_SYMTH (Nucleoside diphosphate kinase OS=Symbiobacterium thermophilum GN=ndk PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.564e-13 Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 241 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 +E +++MVKPDGVQRGL+G++ISR E + ++LAEEHY L KPFFP LIE++ P+ Sbjct: 1 MERSFVMVKPDGVQRGLIGEVISRLERRGLKLVAAKLMRVSRELAEEHYAQLKDKPFFPSLIEFITSGPV 70 The following BLAST results are available for this feature:
BLAST of GE213229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >GE213229 ID=GE213229; Name=GE213229; organism=Citrus sinensis; type=EST; length=454bpback to top |