EY736424

Overview
NameEY736424
Unique NameEY736424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3275 contig Csv1_Contig3275:1..884. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY736424 vs. ExPASy Swiss-Prot
Match: DOF33_ARATH (Dof zinc finger protein DOF3.3 OS=Arabidopsis thaliana GN=DOF3.3 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.900e-27
Identity = 69/169 (40.83%), Postives = 84/169 (49.70%), Query Frame = 2
Query:   92 MRQESKDPAIRLFGKKIAFPSDGEVPVIFSEELPSPXXXXXXXXXXXXXXXXXXXXXXXXXXTTQQDDTTPPNIDESKIPESPEANVNPKTPSID-DETXXXXXXXXXXXQNDASNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGG 595
            M  E++DPAI+LFG KI FPS  E  V   ++                                  +  TP   D++    +  +  N K  ++D +E              D   +    KTLKKP KILPCPRC SM+TKFCYYNNYNINQPRHFCKACQRYWTAGG
Sbjct:    1 MMMETRDPAIKLFGMKIPFPSVFESAVTVEDD---------------------EEDDWSGGDDKSPEKVTPELSDKNNNNCNDNSFNNSKPETLDKEEATSTDQIESSDTPEDNQQTTPDGKTLKKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGG 148          

HSP 2 Score: 104.375 bits (259), Expect = 9.132e-22
Identity = 59/115 (51.30%), Postives = 74/115 (64.35%), Query Frame = 3
Query:  540 LTNPAIFAKLVKDIGLLGGTMRNVPVGAGRRKNKNCASQYRHITISEALQAARIDAPNGDSPPSVKSNGRVLSFGLDAP---ICDSMASVLNLAE-KKVLNGTRNGFHGFQEQEI 872
            +  P  F K  +     GGTMRNVPVGAGRRKNK+ +S YRHITISEAL+AAR+D       P +++N RVLSFGL+A    +   M  V+ L E +KV NG RN FHG  +Q +
Sbjct:  130 INQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSSSSHYRHITISEALEAARLD-------PGLQANTRVLSFGLEAQQQHVAAPMTPVMKLQEDQKVSNGARNRFHGLADQRL 237          
BLAST of EY736424 vs. ExPASy Swiss-Prot
Match: DOF52_ARATH (Dof zinc finger protein DOF5.2 OS=Arabidopsis thaliana GN=DOF5.2 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 3.033e-25
Identity = 66/177 (37.29%), Postives = 81/177 (45.76%), Query Frame = 2
Query:  110 DPAIRLFGKKIAFPSDG---------------EVPVIFSEELPSPXXXXXXXXXXXXXXXXXXXXXXXXXXTTQQDDTTPPNIDESKIPESPEANVNPKTPSIDDETXXXXXXXXXXXQNDASNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGG 595
            DPAI+LFGK I  P  G               ++PV  S+                                T + +       E  +  +   +V   T  I ++T           +     + SQE  LKKPDKILPCPRCNSM+TKFCYYNNYN+NQPRHFCK CQRYWTAGG
Sbjct:    3 DPAIKLFGKTIPLPELGVVDSSSSYTGFLTETQIPVRLSDSCTGDDDDEEMGDSGLGREEGDDVGDGGGESETDKKEEKDSECQEESL-RNESNDVTTTTSGITEKTETTKAAKTN--EESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGG 176          

HSP 2 Score: 76.2554 bits (186), Expect = 2.663e-13
Identity = 50/102 (49.02%), Postives = 63/102 (61.76%), Query Frame = 3
Query:  540 LTNPAIFAKLVKDIGLLGGTMRNVPVGAGRRKNKNCASQY-RHITI--SEALQ-AARIDA--PNGDSPPSVKSNGRVLSFGLDAPICDSMASVLNLAEKKVL 827
            +  P  F K  +     GGTMRNVPVGAGRRKNK+ AS Y RH++I  +EA+Q  AR D   PNG           +L+FG D+ +C+SMAS LNL EK +L
Sbjct:  158 VNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQHPNG---------ANLLTFGSDSVLCESMASGLNLVEKSLL 250          
BLAST of EY736424 vs. ExPASy Swiss-Prot
Match: DOF55_ARATH (Dof zinc finger protein DOF5.5 OS=Arabidopsis thaliana GN=DOF5.5 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 3.353e-24
Identity = 44/55 (80.00%), Postives = 52/55 (94.55%), Query Frame = 2
Query:  431 SNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGG 595
            ++ + ++KTLKKP KILPCPRCNSM+TKFCYYNNYN+NQPRHFCKACQRYWT+GG
Sbjct:   38 TDQSEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGG 92          
BLAST of EY736424 vs. ExPASy Swiss-Prot
Match: DOF13_ARATH (Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.708e-23
Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 2
Query:  437 SNSQEKT--LKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGYHEKCAGGC-------WPSQEQELCLT 655
            ++ +EKT  LKKPDKILPCPRCNS DTKFCYYNNYN+NQPRHFC+ CQRYWTAGG       G        W S +Q L +T
Sbjct:   89 TSEEEKTTELKKPDKILPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKNKGWVSSDQYLHIT 170          
BLAST of EY736424 vs. ExPASy Swiss-Prot
Match: DOF1A_ARATH (Dof zinc finger protein DOF1.10 OS=Arabidopsis thaliana GN=DOF1.10 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 44/83 (53.01%), Postives = 54/83 (65.06%), Query Frame = 2
Query:  428 ASNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGYHEKCAGGC-------WPSQEQELCLT 655
            ++ S  +   LKKPDK++PCPRC S +TKFCYYNNYN+NQPR+FC+ CQRYWTAGG       G        WPS    L +T
Sbjct:  115 STTSGEKSTALKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNKGWPSSNHYLQVT 197          
BLAST of EY736424 vs. ExPASy Swiss-Prot
Match: DOF15_ARATH (Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana GN=DOF1.5 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.731e-21
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 2
Query:  461 KKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGG 595
            K+PDKI+PCPRC SM+TKFCY+NNYN+NQPRHFCK CQRYWTAGG
Sbjct:   56 KRPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGG 100          
BLAST of EY736424 vs. ExPASy Swiss-Prot
Match: DOF23_ARATH (Dof zinc finger protein DOF2.3 OS=Arabidopsis thaliana GN=DOF2.3 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.837e-20
Identity = 39/55 (70.91%), Postives = 46/55 (83.64%), Query Frame = 2
Query:  431 SNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGG 595
            S+S+S     K+PDKI+ CPRC SM+TKFCY+NNYN+NQPRHFCK C RYWTAGG
Sbjct:   42 SSSSSDLTAEKRPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGG 96          
BLAST of EY736424 vs. ExPASy Swiss-Prot
Match: DOF14_ARATH (Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.971e-16
Identity = 33/56 (58.93%), Postives = 45/56 (80.36%), Query Frame = 2
Query:  428 ASNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGG 595
            +S+   Q++  ++P   L CPRC+S +TKFCYYNNY+++QPRHFCKAC+RYWT GG
Sbjct:   10 SSHQQQQQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGG 65          
BLAST of EY736424 vs. ExPASy Swiss-Prot
Match: DOF22_ARATH (Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.390e-16
Identity = 35/59 (59.32%), Postives = 43/59 (72.88%), Query Frame = 2
Query:  452 KTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGG--YHEKCAGGC 622
            K  + P+  L CPRC+S +TKFCY+NNYN+ QPRHFCKAC+RYWT GG   +    GGC
Sbjct:   85 KNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGC 143          
BLAST of EY736424 vs. ExPASy Swiss-Prot
Match: DOF54_ARATH (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.733e-16
Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = 2
Query:  479 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGY--HEKCAGGC 622
            L CPRCNS++TKFCYYNNYN++QPRHFCK C+RYWT GG   +    GGC
Sbjct:   51 LKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGC 100          
The following BLAST results are available for this feature:
BLAST of EY736424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
DOF33_ARATH1.900e-2740.83Dof zinc finger protein DOF3.3 OS=Arabidopsis thal... [more]
DOF52_ARATH3.033e-2537.29Dof zinc finger protein DOF5.2 OS=Arabidopsis thal... [more]
DOF55_ARATH3.353e-2480.00Dof zinc finger protein DOF5.5 OS=Arabidopsis thal... [more]
DOF13_ARATH3.708e-2362.20Dof zinc finger protein DOF1.3 OS=Arabidopsis thal... [more]
DOF1A_ARATH4.532e-2153.01Dof zinc finger protein DOF1.10 OS=Arabidopsis tha... [more]
DOF15_ARATH7.731e-2184.44Dof zinc finger protein DOF1.5 OS=Arabidopsis thal... [more]
DOF23_ARATH3.837e-2070.91Dof zinc finger protein DOF2.3 OS=Arabidopsis thal... [more]
DOF14_ARATH1.971e-1658.93Dof zinc finger protein DOF1.4 OS=Arabidopsis thal... [more]
DOF22_ARATH4.390e-1659.32Dof zinc finger protein DOF2.2 OS=Arabidopsis thal... [more]
DOF54_ARATH5.733e-1668.00Dof zinc finger protein DOF5.4 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-B08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736424 ID=EY736424; Name=EY736424; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGAAAAATTAAAATACCTCCAATACTAAAAACCCTGTGAAT
TCTCTCGCGCGTTTTTTTCCCACTGTTTGGTCTCCGAGAAAATGCGGCAA
GAAAGTAAAGATCCCGCCATCAGACTCTTCGGAAAGAAAATCGCCTTCCC
TTCCGATGGAGAGGTTCCGGTCATCTTCTCCGAGGAGTTGCCATCTCCGG
CGGCCAAGGAAGAGTGTAGCATAGAAGCAGAGGAAGAAAAAGCAGAGGAG
GATTCTTCAGCAGTAAAGGCCGCTGAGACTACACAACAAGATGATACTAC
ACCTCCAAATATAGATGAGTCGAAAATTCCTGAATCGCCGGAGGCTAATG
TAAACCCCAAAACACCTTCGATAGATGATGAAACTGCAAAATCAAAGGCT
GCTAAGTCTGAGAAATCCCAGAATGATGCTTCAAATTCGAACTCACAAGA
GAAGACCCTCAAGAAGCCAGATAAAATCCTTCCCTGCCCTCGTTGCAATA
GCATGGACACCAAATTCTGCTATTACAACAATTACAATATTAACCAACCC
CGCCATTTTTGCAAAGCTTGTCAAAGATATTGGACTGCTGGGGGGTACCA
TGAGAAATGTGCCGGTGGGTGCTGGCCGTCGCAAGAACAAGAACTGTGCC
TCACAATATCGTCACATCACCATCTCTGAGGCTCTTCAAGCAGCTAGAAT
TGATGCTCCAAATGGGGATAGCCCACCCAGTGTGAAAAGCAATGGCAGAG
TCCTCAGCTTTGGGCTAGATGCACCTATCTGTGACTCCATGGCTTCTGTA
TTGAATCTTGCAGAGAAAAAGGTTTTGAATGGTACCCGAAATGGTTTTCA
TGGGTTTCAAGAACAAGAAATTCCAGTCCCTGCAG
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