EY736411

Overview
NameEY736411
Unique NameEY736411
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12554 contig Csv1_Contig12554:22..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY736411 vs. ExPASy Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 3.067e-115
Identity = 190/228 (83.33%), Postives = 202/228 (88.60%), Query Frame = 1
Query:  163 KNKPVQCLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICDDFKGILSLHEASYYSLKGESIMEEAWQFTSKHLKEMMIXSNSKEEDVLVAEQAKRALELPLHWKVPM*KARWVIHLYKKRE 846
            K KPVQCL+S KYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDE YKRRAEEL+GKVK AIKDV EPLDQLELIDNLQRLGLA+ FE E            KDYNWRKENLYATSLEFRLLRQHGYPVSQEVF+GFKDD+ GFICDDFKGILSLHEASYYSL+GESIMEEAWQFTSKHLKE+MI S + EEDV VAEQAKRALELPLHWKVPM +ARW IH+Y++RE
Sbjct:   34 KYKPVQCLISAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDEAYKRRAEELRGKVKIAIKDVIEPLDQLELIDNLQRLGLAHRFETEIRNILNNIYNNNKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFNGFKDDQGGFICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEVMI-SKNMEEDVFVAEQAKRALELPLHWKVPMLEARWFIHIYERRE 260          

HSP 2 Score: 51.2174 bits (121), Expect = 3.067e-115
Identity = 23/25 (92.00%), Postives = 23/25 (92.00%), Query Frame = 3
Query:   63 MSSCINPSTLATSVNGFKCLPLATN 137
            MSSCINPSTL TSVN FKCLPLATN
Sbjct:    1 MSSCINPSTLVTSVNAFKCLPLATN 25          
BLAST of EY736411 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.710e-54
Identity = 110/231 (47.62%), Postives = 155/231 (67.10%), Query Frame = 1
Query:  169 KPVQCLVSTKYDNLT-VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYN-WRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLKGESIMEEAWQFTSKHLKEMMIXSNSKEEDVLVAEQAKRALELPLHWKVPM*KARWVIHLYKKRE 846
            +PVQC+V+ K      + RRSANYQPSIW+HD+++SL   Y  ET  R+   LK +V+  +  V  PL+QLELI+ LQRLGL+YHFE E               + W+ ENLYAT+L+FRLLRQHGY VSQEVF+ FKD++  F   +C+D KG+LSL+EAS++ ++GE+I+EEA  F++KHL+E +  +  K    LV      +LE PLHW++P  +ARW I++Y+  +
Sbjct:   39 RPVQCMVANKVSTSPDILRRSANYQPSIWNHDYIESLRIEYVGETCTRQINVLKEQVRMMLHKVVNPLEQLELIEILQRLGLSYHFEEEIKRILDGVYNNDHGGDTWKAENLYATALKFRLLRQHGYSVSQEVFNSFKDERGSFKACLCEDTKGMLSLYEASFFLIEGENILEEARDFSTKHLEEYVKQNKEKNLATLV----NHSLEFPLHWRMPRLEARWFINIYRHNQ 265          
BLAST of EY736411 vs. ExPASy Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.476e-45
Identity = 106/241 (43.98%), Postives = 142/241 (58.92%), Query Frame = 1
Query:  148 SESWQKNKPVQCLV--STKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDD----KVGFICDDFKGILSLHEASYYSLKGESIMEEAWQFTSKHLKE--MMIXSNSKEEDVLVAEQAKRALELPLHWKVPM*KARWVIHLYKKRE 846
            S S     P+QC +  S   D  T+ RRSANY P IW  DF+QSL   Y  E Y  R+ +LK +VK  +  +   L QLELID LQRLG++YHFE E                  K +LYAT+LEFRLLR++GY + QE+F+ FKD+    K     DD KG+L+L+EAS+Y   GE+I+EEA  FT+++LK   MMI  N    D + A   + ALE+PLHW+    +A+W I  Y+K +
Sbjct:   45 SRSRPNCNPIQCSLAKSPSSDTSTIVRRSANYDPPIWSFDFIQSLPCKYKGEPYTSRSNKLKEEVKKMLVGMENSLVQLELIDTLQRLGISYHFENEIISILKEYFTNISTNKNPKYDLYATALEFRLLREYGYAIPQEIFNDFKDETGKFKASIKNDDIKGVLALYEASFYVKNGENILEEARVFTTEYLKRYVMMIDQNIILNDNM-AILVRHALEMPLHWRTIRAEAKWFIEEYEKTQ 284          
BLAST of EY736411 vs. ExPASy Swiss-Prot
Match: TPS1_CANSA ((-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.398e-40
Identity = 93/216 (43.06%), Postives = 132/216 (61.11%), Query Frame = 1
Query:  217 DRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVG----FICDDFKGILSLHEASYYSLKGESIMEEAWQFTSKHLKEMMIXSNSKEEDV-LVAEQAKRALELPLHWKVPM*KARWVI-HLYKKRE 846
            DRRSANY P IW  DF+QSL   Y  E+Y  R  +L+  VK  +  V   L QLELID +QRLG++Y FE E             D      +LYAT+L+FRLLRQ+G+ V QE+F+ FK+ K G     I +D  G L L+EAS++  KGESI+EEA  FT+K LK+  + S+S   ++ L++     ALE+PL W++   +A+W I  +Y++++
Sbjct:   76 DRRSANYGPPIWSFDFVQSLPIQYKGESYTSRLNKLEKDVKRMLIGVENSLAQLELIDTIQRLGISYRFENEIISILKEKFTNNNDNPNPNYDLYATALQFRLLRQYGFEVPQEIFNNFKNHKTGEFKANISNDIMGALGLYEASFHGKKGESILEEARIFTTKCLKKYKLMSSSNNNNMTLISLLVNHALEMPLQWRITRSEAKWFIEEIYERKQ 291          
BLAST of EY736411 vs. ExPASy Swiss-Prot
Match: BPPS_SALOF ((+)-bornyl diphosphate synthase, chloroplastic OS=Salvia officinalis PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.583e-36
Identity = 90/226 (39.82%), Postives = 139/226 (61.50%), Query Frame = 1
Query:  190 STKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYN---WRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDK-VGF---ICDDFKGILSLHEASYYSLKGESIMEEAWQFTSKHL-KEMMIXSNSKEEDVLVAEQAKRALELPLHWKVPM*KARWVIHLYKKR 843
            S+K       RRS NYQP++WD +++QSLN+ YT+E +  R  EL  +V+  +K+  EP+ QLELI +L+ LGL+  F+ E            K ++     K +LY T+L FRLLRQHG+ +SQ+VF+ FK++K + F   +  D KG+L L+EAS+   KGE  +E A +F +K L K++    N  +E++L+    + +L+LPLHW++   +ARW I  Y +R
Sbjct:   45 SSKLQEAHQIRRSGNYQPALWDSNYIQSLNTPYTEERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFLLRKGEDTLELAREFATKCLQKKLDEGGNEIDENLLL--WIRHSLDLPLHWRIQSVEARWFIDAYARR 268          
BLAST of EY736411 vs. ExPASy Swiss-Prot
Match: OCIS_ARATH ((E)-beta-ocimene synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS03 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.112e-36
Identity = 89/219 (40.64%), Postives = 128/219 (58.45%), Query Frame = 1
Query:  214 VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXK-------DYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD--DFKGILSLHEASYYSLKGESIMEEAWQFTSKHLKEMMIXSNSKEEDVLVAEQAKRALELPLHWKVPM*KARWVIHLYKKR 843
            V RRSANYQPS+W H++L SL + Y  E    R   LK +V   + +    L+QLELID LQRLG++YHFE E                    D N R  +LYAT+LEFRLLRQHG+ ++Q+VF G     +G   D  D KGILSL+EASY S + ++ ++E+  +T+K L++ +  + ++ +   +      ALE+P H +V   +ARW I +Y +R
Sbjct:   24 VSRRSANYQPSLWQHEYLLSLGNTYVKEDNVERVTLLKQEVSKMLNETEGLLEQLELIDTLQRLGVSYHFEQEIKKTLTNVHVKNVRAHKNRIDRN-RWGDLYATALEFRLLRQHGFSIAQDVFDG----NIGVDLDDKDIKGILSLYEASYLSTRIDTKLKESIYYTTKRLRKFVEVNKNETKSYTLRRMVIHALEMPYHRRVGRLEARWYIEVYGER 237          
BLAST of EY736411 vs. ExPASy Swiss-Prot
Match: SSS_SALOF ((+)-sabinene synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.354e-34
Identity = 87/236 (36.86%), Postives = 134/236 (56.78%), Query Frame = 1
Query:  148 SESWQKNKPVQCLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKV----GFICDDFKGILSLHEASYYSLKGESIMEEAWQFTSKHLKEMMIXSNSKEEDVLVAEQAKRALELPLHWKVPM*KARWVIHLYKKR 843
            S S Q+ KP Q             RRS +YQPS+WD +++QSLN+ Y ++ +  R  EL  +V+  +K   E + QLELID+LQ LGL+Y F+ E            + ++    +LY T+L FR+LRQHG+ VS++VF  FK +K       +  D KG+L L+EAS+   +GE  +E A +F+++ L+E        E D  ++   + +L+LPLHW+V   +ARW +  Y +R
Sbjct:   40 SSSLQQEKPHQI------------RRSGDYQPSLWDFNYIQSLNTPYKEQRHFNRQAELIMQVRMLLKVKMEAIQQLELIDDLQYLGLSYFFQDEIKQILSSIHNEPRYFH--NNDLYFTALGFRILRQHGFNVSEDVFDCFKIEKCSDFNANLAQDTKGMLQLYEASFLLREGEDTLELARRFSTRSLRE-KFDEGGDEIDEDLSSWIRHSLDLPLHWRVQGLEARWFLDAYARR 260          
BLAST of EY736411 vs. ExPASy Swiss-Prot
Match: CINS_ARATH (1,8-cineole synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS27 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.471e-34
Identity = 84/217 (38.71%), Postives = 131/217 (60.37%), Query Frame = 1
Query:  214 VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEP-LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNW---RKENLYATSLEFRLLRQHGYPVSQEVFSGFKD--DKVGFICDDFKGILSLHEASYYSLKGESIMEEAWQ-FTSKHLKEMMIXSNSKEEDVLVAEQAKRALELPLHWKVPM*KARWVIHLYKKR 843
            + RRS NYQPS W+H +L S+ + Y  ET     + LK KVK+ + D  +  L+QLELID+LQ+LG++YHFE E                W   ++E+L+ATSLEFRLLRQHG+ VS+ +F    D  +   F  ++  GI+SL+EASY S K ++ + +  + F ++ +++ +   ++K  ++ V E+A  ALE+P HW++     RW I  Y+K+
Sbjct:   45 LSRRSGNYQPSPWNHCYLLSIENKYASETEVITRDVLKKKVKSMLDDEKKSRLEQLELIDDLQKLGVSYHFEIEINDTLTDLHLKMGRNCWKCDKEEDLHATSLEFRLLRQHGFDVSENIFDVIIDQIESNTFKTNNINGIISLYEASYLSTKSDTKLHKVIRPFATEQIRKFVDDEDTK--NIEVREKAYHALEMPYHWRMRRLDTRWYIDAYEKK 259          
BLAST of EY736411 vs. ExPASy Swiss-Prot
Match: MYRS2_ARATH (Myrcene/ocimene synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS24 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.174e-33
Identity = 81/220 (36.82%), Postives = 130/220 (59.09%), Query Frame = 1
Query:  208 LTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEP--LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWR---KENLYATSLEFRLLRQHGYPVSQEVFSGFKD--DKVGFICDDFKGILSLHEASYYSLKGESIMEEAWQ-FTSKHLKEMMIXSNSKEEDVLVAEQAKRALELPLHWKVPM*KARWVIHLYKKR 843
            L + RRS NYQPS WDH +L S+ + Y +E        LK KVK  +++V     L++LELID+LQ+LG++YHFE E                W+   +E+L+AT+LEFRLLRQHG+ VS+++F    D  +   F  D+   I++L+EASY S K ++ + +  + F ++ ++   +   S+  ++++ E A  ALE+P HW++   + RW I  Y+K+
Sbjct:   43 LDLRRRSGNYQPSSWDHSYLLSIENKYVNEKEVITRHVLKKKVKKMLEEVETKSRLEKLELIDDLQKLGVSYHFEQEINNILTNFHLENGKNIWKCDKEEDLHATALEFRLLRQHGFGVSEDIFDVIIDKIESNTFKSDNITSIITLYEASYLSTKSDTKLHKVIRPFATEQIRNF-VDDESETYNIMLREMAIHALEIPYHWRMRRLETRWYIDAYEKK 261          
BLAST of EY736411 vs. ExPASy Swiss-Prot
Match: SCS_SALOF (1,8-cineole synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.260e-33
Identity = 77/218 (35.32%), Postives = 127/218 (58.26%), Query Frame = 1
Query:  202 DNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDK----VGFICDDFKGILSLHEASYYSLKGESIMEEAWQFTSKHLKEMMIXSNSKEEDVLVAEQAKRALELPLHWKVPM*KARWVIHLYKKR 843
            + +   RR+  YQP++WD   +Q  +S Y +E +  RA  +  +V   +++  + + +LELID+L+RLG++ HF+ E             + +  + +LY+T+L F+LLRQ+ + VSQEVF  FK+DK       + DD +G+L L+EAS+ S +GE  +  A  F +K L + ++     ++D+ +    +RALELP HW+V M  AR  I  YK+R
Sbjct:   51 NEIQTGRRTGGYQPTLWDFSTIQLFDSEYKEEKHLMRAAGMIAQVNMLLQEEVDSIQRLELIDDLRRLGISCHFDREIVEILNSKYYTNNEID--ESDLYSTALRFKLLRQYDFSVSQEVFDCFKNDKGTDFKPSLVDDTRGLLQLYEASFLSAQGEETLHLARDFATKFLHKRVLV----DKDINLLSSIERALELPTHWRVQMPNARSFIDAYKRR 262          
The following BLAST results are available for this feature:
BLAST of EY736411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
RLC1_CITLI3.067e-11583.33(R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1[more]
MYRS_QUEIL1.710e-5447.62Myrcene synthase, chloroplastic OS=Quercus ilex PE... [more]
TPS2_CANSA2.476e-4543.98(+)-alpha-pinene synthase, chloroplastic OS=Cannab... [more]
TPS1_CANSA2.398e-4043.06(-)-limonene synthase, chloroplastic OS=Cannabis s... [more]
BPPS_SALOF3.583e-3639.82(+)-bornyl diphosphate synthase, chloroplastic OS=... [more]
OCIS_ARATH6.112e-3640.64(E)-beta-ocimene synthase, chloroplastic OS=Arabid... [more]
SSS_SALOF3.354e-3436.86(+)-sabinene synthase, chloroplastic OS=Salvia off... [more]
CINS_ARATH7.471e-3438.711,8-cineole synthase, chloroplastic OS=Arabidopsis... [more]
MYRS2_ARATH2.174e-3336.82Myrcene/ocimene synthase 2, chloroplastic OS=Arabi... [more]
SCS_SALOF8.260e-3335.321,8-cineole synthase, chloroplastic OS=Salvia offi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-A05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736411 ID=EY736411; Name=EY736411; organism=Citrus sinensis; type=EST; length=851bp
CCACGCGTCCGATCCTTCCCAAGTATACCTGTAAGCTAGCTTACACTGCA
TCTGTATATCCAATGTCTTCTTGCATTAATCCCTCAACCTTGGCTACCTC
TGTAAATGGTTTCAAATGTCTTCCTCTTGCAACAAATAGAGCAGCCATCA
GAATCATGGCAAAAAAATAAGCCAGTCCAATGCCTTGTCAGCACCAAATA
TGATAATTTGACAGTTGATAGGAGATCAGCAAACTACCAACCTTCAATTT
GGGACCATGATTTTTTGCAGTCACTGAATAGCAACTATACGGATGAAACA
TACAAAAGACGAGCAGAAGAGCTGAAGGGAAAAGTGAAGACAGCGATTAA
GGATGTAACCGAGCCTCTGGATCAGTTGGAGCTGATTGATAATTTGCAAA
GACTTGGATTGGCTTATCATTTTGAGCCTGAGATTCGGAACATATTGCGT
AATATCCACAACCATAATAAAGATTATAATTGGAGAAAAGAAAATCTGTA
TGCAACCTCCCTTGAATTCAGACTACTTAGACAACATGGCTATCCTGTTT
CTCAAGAGGTTTTCAGTGGTTTTAAAGACGACAAGGTAGGCTTCATTTGT
GATGATTTCAAGGGAATACTGAGCTTGCATGAAGCCTCGTATTACAGCTT
AAAAGGAGAAAGCATCATGGAGGAGGCCTGGCAATTCACCAGTAAGCATC
TTAAAGAAATGATGATCNACAGCAACAGCAAGGAAGAAGATGTATTGGTA
GCAGAACAAGCGAAGCGGGCGCTGGAGCTCCCTCTGCATTGGAAAGTGCC
TATGTAAAAGGCAAGGTGGGTCATACACCTTTATAAGAAAAGAGAGGGCA
G
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