EY736341

Overview
NameEY736341
Unique NameEY736341
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL9_ICTPU (60S ribosomal protein L9 OS=Ictalurus punctatus GN=rpl9 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 9.319e-46
Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 2
Query:  104 FQHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            F H+NL+  L+  ++   +KL++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLG
Sbjct:   38 FNHINLELRLLGKKQ---KKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNFLG 119          

HSP 2 Score: 92.0485 bits (227), Expect = 9.319e-46
Identity = 48/73 (65.75%), Postives = 54/73 (73.97%), Query Frame = 3
Query:  351 FLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSERGHIFE 569
            FLGEK +R+V M  GV    S   KDEL+L+GNDIELVS SAALI Q   VKN DIRKFLDGIYVSE+G + E
Sbjct:  117 FLGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVVE 189          

HSP 3 Score: 38.1206 bits (87), Expect = 9.319e-46
Identity = 14/33 (42.42%), Postives = 24/33 (72.73%), Query Frame = 3
Query:   12 SETMDIPDGVKIKINAKIIEVEGPRGKLSRDFS 110
            ++T+DIPD V + +  + + V+GPRG L R+F+
Sbjct:    7 TQTVDIPDNVDVTLKGRTVSVKGPRGVLRREFN 39          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL9_MOUSE (60S ribosomal protein L9 OS=Mus musculus GN=Rpl9 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 7.634e-45
Identity = 44/85 (51.76%), Postives = 59/85 (69.41%), Query Frame = 2
Query:  104 FQHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            F H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLG
Sbjct:   38 FNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLG 119          

HSP 2 Score: 90.8929 bits (224), Expect = 7.634e-45
Identity = 48/71 (67.61%), Postives = 54/71 (76.06%), Query Frame = 3
Query:  351 FLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSERGHI 563
            FLGEK +R+V M  GV    S+  KDELIL+GNDIELVS SAALI Q   VKN DIRKFLDGIYVSE+G +
Sbjct:  117 FLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          

HSP 3 Score: 38.5058 bits (88), Expect = 7.634e-45
Identity = 15/33 (45.45%), Postives = 25/33 (75.76%), Query Frame = 3
Query:   12 SETMDIPDGVKIKINAKIIEVEGPRGKLSRDFS 110
            ++T+DIP+ V+I +  + + V+GPRG L RDF+
Sbjct:    7 NQTVDIPENVEITLKGRTVIVKGPRGTLRRDFN 39          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL9_MACFA (60S ribosomal protein L9 OS=Macaca fascicularis GN=RPL9 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.930e-45
Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 2
Query:  104 FQHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            F H+N++  L+  +   K++L++D W+G+RK  A IRT  SHV N+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLG
Sbjct:   38 FNHINVELSLLGKK---KKRLRVDKWWGNRKELATIRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLG 119          

HSP 2 Score: 90.8929 bits (224), Expect = 9.930e-45
Identity = 48/71 (67.61%), Postives = 54/71 (76.06%), Query Frame = 3
Query:  351 FLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSERGHI 563
            FLGEK +R+V M  GV    S+  KDELIL+GNDIELVS SAALI Q   VKN DIRKFLDGIYVSE+G +
Sbjct:  117 FLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          

HSP 3 Score: 37.7354 bits (86), Expect = 9.930e-45
Identity = 15/33 (45.45%), Postives = 24/33 (72.73%), Query Frame = 3
Query:   12 SETMDIPDGVKIKINAKIIEVEGPRGKLSRDFS 110
            ++T+DIP+ V I +  + + V+GPRG L RDF+
Sbjct:    7 NQTVDIPENVDITLKGRTVIVKGPRGTLRRDFN 39          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL9_BOVIN (60S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.930e-45
Identity = 44/85 (51.76%), Postives = 59/85 (69.41%), Query Frame = 2
Query:  104 FQHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            F H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLG
Sbjct:   38 FNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLG 119          

HSP 2 Score: 90.8929 bits (224), Expect = 9.930e-45
Identity = 48/71 (67.61%), Postives = 54/71 (76.06%), Query Frame = 3
Query:  351 FLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSERGHI 563
            FLGEK +R+V M  GV    S+  KDELIL+GNDIELVS SAALI Q   VKN DIRKFLDGIYVSE+G +
Sbjct:  117 FLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          

HSP 3 Score: 38.1206 bits (87), Expect = 9.930e-45
Identity = 15/33 (45.45%), Postives = 24/33 (72.73%), Query Frame = 3
Query:   12 SETMDIPDGVKIKINAKIIEVEGPRGKLSRDFS 110
            ++T+DIP+ V I +  + + V+GPRG L RDF+
Sbjct:    7 NQTVDIPENVDINLKGRTVIVKGPRGTLRRDFN 39          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL9_RAT (60S ribosomal protein L9 OS=Rattus norvegicus GN=Rpl9 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.291e-44
Identity = 44/85 (51.76%), Postives = 59/85 (69.41%), Query Frame = 2
Query:  104 FQHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            F H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLG
Sbjct:   38 FNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLG 119          

HSP 2 Score: 90.8929 bits (224), Expect = 1.291e-44
Identity = 48/71 (67.61%), Postives = 54/71 (76.06%), Query Frame = 3
Query:  351 FLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSERGHI 563
            FLGEK +R+V M  GV    S+  KDELIL+GNDIELVS SAALI Q   VKN DIRKFLDGIYVSE+G +
Sbjct:  117 FLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          

HSP 3 Score: 37.7354 bits (86), Expect = 1.291e-44
Identity = 15/33 (45.45%), Postives = 24/33 (72.73%), Query Frame = 3
Query:   12 SETMDIPDGVKIKINAKIIEVEGPRGKLSRDFS 110
            ++T+DIP+ V I +  + + V+GPRG L RDF+
Sbjct:    7 NQTVDIPENVDITLKGRTVIVKGPRGTLRRDFN 39          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL9_HUMAN (60S ribosomal protein L9 OS=Homo sapiens GN=RPL9 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.291e-44
Identity = 44/85 (51.76%), Postives = 59/85 (69.41%), Query Frame = 2
Query:  104 FQHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            F H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLG
Sbjct:   38 FNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLG 119          

HSP 2 Score: 90.8929 bits (224), Expect = 1.291e-44
Identity = 48/71 (67.61%), Postives = 54/71 (76.06%), Query Frame = 3
Query:  351 FLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSERGHI 563
            FLGEK +R+V M  GV    S+  KDELIL+GNDIELVS SAALI Q   VKN DIRKFLDGIYVSE+G +
Sbjct:  117 FLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          

HSP 3 Score: 37.7354 bits (86), Expect = 1.291e-44
Identity = 15/33 (45.45%), Postives = 24/33 (72.73%), Query Frame = 3
Query:   12 SETMDIPDGVKIKINAKIIEVEGPRGKLSRDFS 110
            ++T+DIP+ V I +  + + V+GPRG L RDF+
Sbjct:    7 NQTVDIPENVDITLKGRTVIVKGPRGTLRRDFN 39          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL9_PONAB (60S ribosomal protein L9 OS=Pongo abelii GN=RPL9 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.841e-44
Identity = 44/85 (51.76%), Postives = 59/85 (69.41%), Query Frame = 2
Query:  104 FQHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            F H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLG
Sbjct:   38 FNHINVELSLLGKK---KKRLRVDEWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLG 119          

HSP 2 Score: 89.7373 bits (221), Expect = 2.841e-44
Identity = 48/71 (67.61%), Postives = 53/71 (74.65%), Query Frame = 3
Query:  351 FLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSERGHI 563
            FLGEK +R+V M  GV    S+  KDELIL GNDIELVS SAALI Q   VKN DIRKFLDGIYVSE+G +
Sbjct:  117 FLGEKYIRRVRMRPGVACSVSQAQKDELILGGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          

HSP 3 Score: 37.7354 bits (86), Expect = 2.841e-44
Identity = 15/33 (45.45%), Postives = 24/33 (72.73%), Query Frame = 3
Query:   12 SETMDIPDGVKIKINAKIIEVEGPRGKLSRDFS 110
            ++T+DIP+ V I +  + + V+GPRG L RDF+
Sbjct:    7 NQTVDIPENVDITLKGRTVIVKGPRGTLRRDFN 39          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL9_SPOFR (60S ribosomal protein L9 OS=Spodoptera frugiperda GN=RpL9 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.698e-44
Identity = 47/85 (55.29%), Postives = 58/85 (68.24%), Query Frame = 2
Query:  104 FQHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            F+HL +D  ++       R LK++ WFGS+K  AA+RT  SHV N+I GVTKG++YKMR VYAHFPIN      N  IEIRNFLG
Sbjct:   38 FKHLAVDIRMVNP-----RVLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRSVYAHFPINCVTTEGNSVIEIRNFLG 117          

HSP 2 Score: 89.7373 bits (221), Expect = 3.698e-44
Identity = 46/68 (67.65%), Postives = 53/68 (77.94%), Query Frame = 3
Query:  351 FLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSER 554
            FLGEK +R+V M  GVTVV S K KDELI++GN +E VS SAALI Q   VKN DIRKFLDG+YVSE+
Sbjct:  115 FLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 182          

HSP 3 Score: 35.039 bits (79), Expect = 3.698e-44
Identity = 12/34 (35.29%), Postives = 25/34 (73.53%), Query Frame = 3
Query:    6 VRSETMDIPDGVKIKINAKIIEVEGPRGKLSRDF 107
            V ++ + IP+G+ + + ++++ V+GPRG L R+F
Sbjct:    5 VANQKVKIPEGLTVHVKSRLVTVKGPRGVLKRNF 38          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL9_DROME (60S ribosomal protein L9 OS=Drosophila melanogaster GN=RpL9 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.260e-40
Identity = 47/94 (50.00%), Postives = 61/94 (64.89%), Query Frame = 2
Query:   77 GAQRKAQPGFQHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            G +   +  F+HL LD ++       KR LK++ WFG++K  AA+RT  SH+ N+I GVT G++YKMR VYAHFPIN      N  IEIRNFLG
Sbjct:   29 GTRGTLKRSFKHLALDMYM-----PDKRTLKVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLG 117          

HSP 2 Score: 91.6633 bits (226), Expect = 3.260e-40
Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 3
Query:  351 FLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSER 554
            FLGEK +R+V+M  GVTVV S   KDELI++GNDIE VS SAALI Q   VKN DIRKFLDG+YVSE+
Sbjct:  115 FLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEK 182          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL9B_SCHPO (60S ribosomal protein L9-B OS=Schizosaccharomyces pombe GN=rpl9b PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.723e-40
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 3
Query:  351 FLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSERGHIFE 569
            FLGE+  R +  L GVTV  S  VKDE+I++GN +E VS+SAA I Q C+V+N DIRKFLDGIYVSERG+I E
Sbjct:  115 FLGERITRVIKCLPGVTVSISSAVKDEIIIEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNIEE 187          

HSP 2 Score: 81.2629 bits (199), Expect = 4.723e-40
Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 2
Query:  164 LKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            +K   W GSRK +A IRTA S + N+I GVT+G+RYKMR VYAHFPIN ++      +EIRNFLG
Sbjct:   53 IKFIVWHGSRKHNACIRTAYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLG 117          

HSP 3 Score: 37.3502 bits (85), Expect = 4.723e-40
Identity = 14/32 (43.75%), Postives = 24/32 (75.00%), Query Frame = 3
Query:    9 RSETMDIPDGVKIKINAKIIEVEGPRGKLSRD 104
            + ET+ IP+GV + I A+++ V+GPRG L ++
Sbjct:    7 KDETLTIPEGVSVDIKARLVTVKGPRGVLKQN 38          
The following BLAST results are available for this feature:
BLAST of EY736341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
RL9_ICTPU9.319e-4652.9460S ribosomal protein L9 OS=Ictalurus punctatus GN... [more]
RL9_MOUSE7.634e-4551.7660S ribosomal protein L9 OS=Mus musculus GN=Rpl9 P... [more]
RL9_MACFA9.930e-4552.9460S ribosomal protein L9 OS=Macaca fascicularis GN... [more]
RL9_BOVIN9.930e-4551.7660S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=... [more]
RL9_RAT1.291e-4451.7660S ribosomal protein L9 OS=Rattus norvegicus GN=R... [more]
RL9_HUMAN1.291e-4451.7660S ribosomal protein L9 OS=Homo sapiens GN=RPL9 P... [more]
RL9_PONAB2.841e-4451.7660S ribosomal protein L9 OS=Pongo abelii GN=RPL9 P... [more]
RL9_SPOFR3.698e-4455.2960S ribosomal protein L9 OS=Spodoptera frugiperda ... [more]
RL9_DROME3.260e-4050.0060S ribosomal protein L9 OS=Drosophila melanogaste... [more]
RL9B_SCHPO4.723e-4063.0160S ribosomal protein L9-B OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-015-B02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736341 ID=EY736341; Name=EY736341; organism=Citrus sinensis; type=EST; length=895bp
CACGCGTCCGATCAGAGACGATGGACATCCCAGACGGGGTGAAAATCAAG
ATCAATGCTAAGATCATCGAGGTTGAGGGGCCCAGAGGAAAGCTCAGCCG
GGATTTCAGCACCTGAATCTCGACTTCCATCTGATGACCGACGAGGAAAC
CGGGAAGCGGAAGCTCAAGATCGACGCTTGGTTCGGTTCTCGCAAGACCA
GCGCCGCCATCAGGACTGCCCTCAGCCACGTCGGGAATCTCATCAACGGT
GTCACCAAGGGATACCGCTACAAGATGAGATTCGTCTACGCTCACTTCCC
CATCAACGCCTCCATCGGCAATGCCAACAAGTCCATCGAGATCCGAAACT
TTCTTGGGGGAGAAGAAGGTTCGCAAAGTGGATATGCTTGATGGTGTTAC
TGTTGTTCGGTCTGAGAAGGTTAAGGATGAACTCATTCTTGATGGGAATG
ACATTGAGCTTGTGTCTCGGTCTGCTGCTCTGATCGACCAGAAATGCCAT
GTGAAGAACANGGACATTAGGAAATTCCTTGACGGGATCTATGTCAGCGA
GAGAGGGCACATATTTGAAGAAAACTGACGACTAGCTCTNCATATTATGA
AATTTGTGGTCCTTCTTTTTTTAATTTTGCTCTTACCTTGTGCTTGAGGA
CATGCTTTTGGGTTGGATCCGGGATTTAAAGGAAAGGTTATGCAAATCAA
ATGGGCTGGCCGCCGATTTCCTATGGTGACGTGTATAAGTATGGGATTTT
AAGCTGTGCACGCTGGGCCCAAGGCAAGTGAGGANAGGTGGGGGAATGGC
GAGGCCGTTGGGGGGGCGCGTCTCTAGAGGGTGCTAGAGTTACGTTCCGC
GTTGTTTGGCAACGCCATAACCCTCTTAAGGTGTGCCCCCAAGTC
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