EY736305

Overview
NameEY736305
Unique NameEY736305
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736305 vs. ExPASy Swiss-Prot
Match: ATR_ARATH (Serine/threonine-protein kinase ATR OS=Arabidopsis thaliana GN=ATR PE=2 SV=2)

HSP 1 Score: 434.876 bits (1117), Expect = 2.917e-121
Identity = 220/286 (76.92%), Postives = 233/286 (81.47%), Query Frame = 3
Query:   12 GIKRPFLCKPKDDLRKDSRMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRNILQDIYISCGKFDRQKTNPQIKRIYDQFQGKIPEDEMLKTKILPMFPPVFHKWFLTTFSEPAAWFRARVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLLLEKPDLVPFRLTQNMIDGLGITGYEGYILRVCDIRFQF*ELRGESLMNVLETFIITLL*SGQNSPVQGG*T*QTPSQPAIIKFNATFTRHCVVLTPRP 869
            GI+ PFLCKPKDDLRKD+RMMEFTAMINRLLSKYPESRRRKLYIRTFAV PLTEDCG+VEWVPHTRGLR+ILQDIYISCGKFDRQKTNPQIKRIYDQ   K  E EMLKTKILPMFPPVFHKWFLTTFSEPAAWFR+RVAYAHTTAVWSMVGHIVGLGDRHGENILFDST+GDCVHVDFSCLFDKGL LEKP+LVPFRLTQNMIDGLGITGYEG  +RVC+I         E+LM++LETFI   L     S    G   Q P     I       +  VV  P P
Sbjct: 2389 GIEYPFLCKPKDDLRKDARMMEFTAMINRLLSKYPESRRRKLYIRTFAVAPLTEDCGLVEWVPHTRGLRHILQDIYISCGKFDRQKTNPQIKRIYDQCAVK-KEYEMLKTKILPMFPPVFHKWFLTTFSEPAAWFRSRVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTSGDCVHVDFSCLFDKGLQLEKPELVPFRLTQNMIDGLGITGYEGIFMRVCEITLTVLRTHRETLMSILETFIHDPLVEWTKSHKSSGVEVQNPHAQRAISSIEARLQGVVVGVPLP 2673          
BLAST of EY736305 vs. ExPASy Swiss-Prot
Match: ATR_ORYSJ (Serine/threonine-protein kinase ATR OS=Oryza sativa subsp. japonica GN=Os06g0724700 PE=2 SV=1)

HSP 1 Score: 431.409 bits (1108), Expect = 3.225e-120
Identity = 205/242 (84.71%), Postives = 218/242 (90.08%), Query Frame = 3
Query:   12 GIKRPFLCKPKDDLRKDSRMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRNILQDIYISCGKFDRQKTNPQIKRIYDQFQGKIPEDEMLKTKILPMFPPVFHKWFLTTFSEPAAWFRARVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLLLEKPDLVPFRLTQNMIDGLGITGYEGYILRVCDIRFQF*ELRGESLMNVLETFI 737
            GI RPFLCKPKDDLRKDSRMMEF AMINRLLSK PESRRRKLYIRTFAV+PLTEDCGMVEWVP+TRGLR ILQDIYI+CGKFDR KTNPQIK+IYDQ QGK+PE EMLK KILPMFPPVFHKWFLTTFSEPAAW RAR AYAHTTAVWSMVGHIVGLGDRHGENIL DSTTGDC+HVDFSCLFDKGLLLEKP++VPFR TQNM+DGLGITGYEG  ++VC+I         E+LM VLETFI
Sbjct: 2391 GISRPFLCKPKDDLRKDSRMMEFNAMINRLLSKVPESRRRKLYIRTFAVVPLTEDCGMVEWVPNTRGLRQILQDIYITCGKFDRMKTNPQIKKIYDQLQGKMPE-EMLKAKILPMFPPVFHKWFLTTFSEPAAWIRARAAYAHTTAVWSMVGHIVGLGDRHGENILLDSTTGDCIHVDFSCLFDKGLLLEKPEVVPFRFTQNMVDGLGITGYEGVFVKVCEITLSVLRTHKEALMTVLETFI 2631          
BLAST of EY736305 vs. ExPASy Swiss-Prot
Match: ATR_ORYSI (Serine/threonine-protein kinase ATR OS=Oryza sativa subsp. indica GN=OsI_023634 PE=3 SV=2)

HSP 1 Score: 431.409 bits (1108), Expect = 3.225e-120
Identity = 205/242 (84.71%), Postives = 218/242 (90.08%), Query Frame = 3
Query:   12 GIKRPFLCKPKDDLRKDSRMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRNILQDIYISCGKFDRQKTNPQIKRIYDQFQGKIPEDEMLKTKILPMFPPVFHKWFLTTFSEPAAWFRARVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLLLEKPDLVPFRLTQNMIDGLGITGYEGYILRVCDIRFQF*ELRGESLMNVLETFI 737
            GI RPFLCKPKDDLRKDSRMMEF AMINRLLSK PESRRRKLYIRTFAV+PLTEDCGMVEWVP+TRGLR ILQDIYI+CGKFDR KTNPQIK+IYDQ QGK+PE EMLK KILPMFPPVFHKWFLTTFSEPAAW RAR AYAHTTAVWSMVGHIVGLGDRHGENIL DSTTGDC+HVDFSCLFDKGLLLEKP++VPFR TQNM+DGLGITGYEG  ++VC+I         E+LM VLETFI
Sbjct: 2391 GISRPFLCKPKDDLRKDSRMMEFNAMINRLLSKVPESRRRKLYIRTFAVVPLTEDCGMVEWVPNTRGLRQILQDIYITCGKFDRMKTNPQIKKIYDQLQGKMPE-EMLKAKILPMFPPVFHKWFLTTFSEPAAWIRARAAYAHTTAVWSMVGHIVGLGDRHGENILLDSTTGDCIHVDFSCLFDKGLLLEKPEVVPFRFTQNMVDGLGITGYEGVFVKVCEITLSVLRTHKEALMTVLETFI 2631          
BLAST of EY736305 vs. ExPASy Swiss-Prot
Match: ATR_MOUSE (Serine/threonine-protein kinase ATR OS=Mus musculus GN=Atr PE=1 SV=2)

HSP 1 Score: 259.61 bits (662), Expect = 1.679e-68
Identity = 129/251 (51.39%), Postives = 177/251 (70.52%), Query Frame = 3
Query:   30 LCKPKDDLRKDSRMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRNILQDIYISCGKFDRQKTNPQIKRIYDQFQGKIPED-EMLKTKILPMFPPVFHKWFLTTFSEPAAWFRARVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLLLEKPDLVPFRLTQNMIDGLGITGYEGYILRVCDIRFQF*ELRGESLMNVLETFIITLL*SGQNSPVQG 779
            +CKPKDDLRKD R+MEF ++IN+ L K  ESRRR+L+IRT+AVIPL ++CG++EWV +T GLR IL  IY   G +    T  ++++        + E  ++ +  +LP  PPVFH+WFL TF +P +W+ +R AY  +TAV SMVG+I+GLGDRHGENILFDS TG+CVHVDF+CLF+KG   E P++VPFRLT NM++G+G  G EG   R C++  +    + E LM+VL+TF+   L  G + PV+G
Sbjct: 2316 MCKPKDDLRKDCRLMEFNSLINKSLRKDAESRRRELHIRTYAVIPLNDECGIIEWVNNTAGLRPILTKIYKEKGVY---MTGKELRQCMLPKSAALSEKLKVFQELLLPRHPPVFHEWFLRTFPDPTSWYSSRSAYCRSTAVMSMVGYILGLGDRHGENILFDSFTGECVHVDFNCLFNKGETFEVPEIVPFRLTHNMVNGMGPMGTEGLFRRACEVTLRLMRDQREPLMSVLKTFLHDPLVEG-SKPVKG 2562          
BLAST of EY736305 vs. ExPASy Swiss-Prot
Match: ATR_XENLA (Serine/threonine-protein kinase atr OS=Xenopus laevis GN=atr PE=1 SV=2)

HSP 1 Score: 256.914 bits (655), Expect = 1.089e-67
Identity = 125/241 (51.87%), Postives = 170/241 (70.54%), Query Frame = 3
Query:   30 LCKPKDDLRKDSRMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRNILQDIY-----ISCGKFDRQKTNPQIKRIYDQFQGKIPEDEMLKTKILPMFPPVFHKWFLTTFSEPAAWFRARVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLLLEKPDLVPFRLTQNMIDGLGITGYEGYILRVCDIRFQF*ELRGESLMNVLETFI 737
            +CKPKDDLRKD R+MEF ++IN+ L K  ESRRR+L+IRT+AVIPL ++CG++EWV +T G RNIL  +Y        GK  RQ   P+   + ++ +       + K  +LP  PP+FH+WFL TF +P +W+ +R AY  +TAV SMVG+I+GLGDRHGENILFDS TG+CVHVDF+CLF+KG   E P++VPFRLT NM++G+G  G EG   R C++  +    + ESLM+VL+ F+
Sbjct: 2335 MCKPKDDLRKDCRLMEFNSLINKCLRKDAESRRRELHIRTYAVIPLNDECGIIEWVNNTAGFRNILIKLYKEKGIYMGGKELRQCMLPKSAPLQEKLK-------VFKEALLPRHPPLFHEWFLRTFPDPTSWYNSRSAYCRSTAVMSMVGYILGLGDRHGENILFDSLTGECVHVDFNCLFNKGETFEVPEIVPFRLTHNMVNGMGPMGTEGLFRRACEVIMRLMREQRESLMSVLKPFL 2568          
BLAST of EY736305 vs. ExPASy Swiss-Prot
Match: ATR_HUMAN (Serine/threonine-protein kinase ATR OS=Homo sapiens GN=ATR PE=1 SV=3)

HSP 1 Score: 256.914 bits (655), Expect = 1.089e-67
Identity = 122/237 (51.48%), Postives = 170/237 (71.73%), Query Frame = 3
Query:   30 LCKPKDDLRKDSRMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRNILQDIYISCGKFDRQKTNPQIKRIYDQFQGKIPED-EMLKTKILPMFPPVFHKWFLTTFSEPAAWFRARVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLLLEKPDLVPFRLTQNMIDGLGITGYEGYILRVCDIRFQF*ELRGESLMNVLETFI 737
            +CKPKDDLRKD R+MEF ++IN+ L K  ESRRR+L+IRT+AVIPL ++CG++EWV +T GLR IL  +Y   G +    T  ++++        + E  ++ +  +LP  PP+FH+WFL TF +P +W+ +R AY  +TAV SMVG+I+GLGDRHGENILFDS TG+CVHVDF+CLF+KG   E P++VPFRLT NM++G+G  G EG   R C++  +    + E LM+VL+TF+
Sbjct: 2325 MCKPKDDLRKDCRLMEFNSLINKCLRKDAESRRRELHIRTYAVIPLNDECGIIEWVNNTAGLRPILTKLYKEKGVY---MTGKELRQCMLPKSAALSEKLKVFREFLLPRHPPIFHEWFLRTFPDPTSWYSSRSAYCRSTAVMSMVGYILGLGDRHGENILFDSLTGECVHVDFNCLFNKGETFEVPEIVPFRLTHNMVNGMGPMGTEGLFRRACEVTMRLMRDQREPLMSVLKTFL 2558          
BLAST of EY736305 vs. ExPASy Swiss-Prot
Match: RAD3_SCHPO (Protein kinase rad3 OS=Schizosaccharomyces pombe GN=rad3 PE=1 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 3.872e-65
Identity = 125/242 (51.65%), Postives = 161/242 (66.53%), Query Frame = 3
Query:   24 PFLCKPKDDLRKDSRMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRNILQDIYISCGKFDRQKTNP----QIKRIYDQFQGKIPEDEMLKTKILPMFPPVFHKWFLTTFSEPAAWFRARVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLLLEKPDLVPFRLTQNMIDGLGITGYEGYILRVCDIRFQF*ELRGESLMNVLETFI 737
            PFLCKPKDDLRKD+R+MEF  +I ++L K  E+ RR L IRT+ VIPL E+CG +EWV HTR  R IL   Y       RQK  P    +IK   D         ++ + KILP FPPVF++WF+ +F EP  W  +R  Y  T AV S+VG+++GLGDRHGENILFD  TG+ +HVDF+CLFDKGL  EKP+ VPFRLT NM+D +G TGYEG   +  +I  +      ++LM+VLE+F+
Sbjct: 2079 PFLCKPKDDLRKDARLMEFNNLICKILRKDQEANRRNLCIRTYVVIPLNEECGFIEWVNHTRPFREILLKSY-------RQKNIPISYQEIKVDLDFALRSPNPGDIFEKKILPKFPPVFYEWFVESFPEPNNWVTSRQNYCRTLAVMSIVGYVLGLGDRHGENILFDEFTGEAIHVDFNCLFDKGLTFEKPEKVPFRLTHNMVDAMGPTGYEGGFRKASEITMRLLRSNQDTLMSVLESFL 2313          
BLAST of EY736305 vs. ExPASy Swiss-Prot
Match: ATR1_DICDI (Probable serine/threonine-protein kinase atr1 OS=Dictyostelium discoideum GN=atr1 PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.515e-56
Identity = 113/244 (46.31%), Postives = 149/244 (61.07%), Query Frame = 3
Query:    6 RPGIKRPFLCKPKDDLRKDSRMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRNILQDIYISCGKFDRQKTNPQIKRIYDQFQGKIPEDEMLKTKILPMFPPVFHKWFLTTFSEPAAWFRARVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLLLEKPDLVPFRLTQNMIDGLGITGYEGYILRVCDIRFQF*ELRGESLMNVLETFI 737
            R G +  FL KP DDLRKD R+MEF  M+N+L+ K P  R+R L IRT+ VIP  E+ G++EWV +T  LR+IL  IY +       + N  +    ++    + ED          FPPV HK F+T F EP+AW  AR A+A + A+ SMVG ++GLGDRH ENIL DS TG+CVH+D++CLF KG     P+ VPFRLT+NM+D  G+ G EG    VC+   +      E L+ VLE FI
Sbjct: 2838 RQGNRYSFLLKPNDDLRKDQRVMEFNTMVNKLIKKDPACRKRNLKIRTYTVIPFNEESGIIEWVSNTATLRSILGGIYETMDTIGIDRFNQMVNAKKEKHYLDLFED------FNRFFPPVLHKHFITNFPEPSAWLDARDAFARSCAIMSMVGSVLGLGDRHTENILLDSITGECVHIDYNCLFWKGETFTVPERVPFRLTRNMVDVFGVLGVEGTFKTVCENTLRVLRSNKEVLLRVLENFI 3075          
BLAST of EY736305 vs. ExPASy Swiss-Prot
Match: ATR_DROME (Serine/threonine-protein kinase ATR OS=Drosophila melanogaster GN=mei-41 PE=1 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.993e-53
Identity = 103/237 (43.46%), Postives = 151/237 (63.71%), Query Frame = 3
Query:   30 LCKPKDDLRKDSRMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRNILQDIYISCGKFDRQKTNPQIKRIYDQFQGKIPEDEMLKTK-ILPMFPPVFHKWFLTTFSEPAAWFRARVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLLLEKPDLVPFRLTQNMIDGLGITGYEGYILRVCDIRFQF*ELRGESLMNVLETFI 737
            L KPKDDLR+D+R+MEF  ++ R L +   +R+R+L+IRT+AV+P  E+CG+VEW+P+    R+I  ++Y    +     +  Q++ +       I     + TK ++P  PPVF +W    F+ P +W+ AR  Y  T AV SMVG+I+GLGDRHGENILF    GD VHVDF+CLF++G LL  P++VPFRLT NMI  +G  G EG   + C+I  +  +   ++LM++L  F+
Sbjct: 2213 LVKPKDDLRRDARLMEFNGLVKRYLHQDAPARQRRLHIRTYAVLPFNEECGLVEWLPNLASYRSICMNLY---AQRRLVMSTRQLQSLAVPLHESIERKREVFTKQLVPAHPPVFQEWLRQRFATPHSWYEARNTYIRTVAVMSMVGYILGLGDRHGENILFAEGNGDAVHVDFNCLFNQGELLPYPEVVPFRLTHNMIVAMGPLGVEGSFRKCCEITLRLLKQESKTLMSILRPFV 2446          
BLAST of EY736305 vs. ExPASy Swiss-Prot
Match: ATR_ASHGO (Serine/threonine-protein kinase MEC1 OS=Ashbya gossypii GN=MEC1 PE=3 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.930e-48
Identity = 100/237 (42.19%), Postives = 146/237 (61.60%), Query Frame = 3
Query:   30 LCKPKDDLRKDSRMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRNILQDIYISCGKFDRQKTNPQIKRIYDQFQGKIPEDEM-LKTKILPMFPPVFHKWFLTTFSEPAAWFRARVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLLLEKPDLVPFRLTQNMIDGLGITGYEGYILRVCDIRFQF*ELRGESLMNVLETFI 737
            +CK K+D+R+D++ M+F  M+  LL K  ESRRR L I T+A++ L EDCG++E VP+   +R+IL        K+D  K    +  +Y++++    E  +         FPPV ++WFL TF  P  W+ AR A+  + AV +MVGHI+GLGDRH ENIL D  TG  +HVDF CLF+KG  L  P++VPFRLTQN+ D  G+TG EG   +  ++  +       +L+N++ET +
Sbjct: 2034 MCK-KEDVRQDNQYMQFANMMVFLLGKDSESRRRSLNITTYAILSLREDCGLIEIVPNVDTIRSILM------AKYDSMKIKYTLSVLYEKWKSVSEEQRLGFYKSCTDTFPPVLYQWFLETFPNPIRWYNARNAFVRSYAVMAMVGHILGLGDRHLENILLDLQTGKVLHVDFDCLFEKGKTLPVPEIVPFRLTQNIQDAFGVTGTEGTFKKSSEVTVRVMRNNELALVNIIETIM 2263          
The following BLAST results are available for this feature:
BLAST of EY736305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ATR_ARATH2.917e-12176.92Serine/threonine-protein kinase ATR OS=Arabidopsis... [more]
ATR_ORYSJ3.225e-12084.71Serine/threonine-protein kinase ATR OS=Oryza sativ... [more]
ATR_ORYSI3.225e-12084.71Serine/threonine-protein kinase ATR OS=Oryza sativ... [more]
ATR_MOUSE1.679e-6851.39Serine/threonine-protein kinase ATR OS=Mus musculu... [more]
ATR_XENLA1.089e-6751.87Serine/threonine-protein kinase atr OS=Xenopus lae... [more]
ATR_HUMAN1.089e-6751.48Serine/threonine-protein kinase ATR OS=Homo sapien... [more]
RAD3_SCHPO3.872e-6551.65Protein kinase rad3 OS=Schizosaccharomyces pombe G... [more]
ATR1_DICDI2.515e-5646.31Probable serine/threonine-protein kinase atr1 OS=D... [more]
ATR_DROME1.993e-5343.46Serine/threonine-protein kinase ATR OS=Drosophila ... [more]
ATR_ASHGO1.930e-4842.19Serine/threonine-protein kinase MEC1 OS=Ashbya gos... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-014-E10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736305 ID=EY736305; Name=EY736305; organism=Citrus sinensis; type=EST; length=880bp
CCACGCGTCCGGGCATTAAGCGCCCTTTCCTCTGCAAGCCAAAGGATGAT
CTGAGGAAAGATTCCCGTATGATGGAATTTACTGCAATGATAAATCGTTT
GTTGTCCAAATACCCTGAAAGCCGTCGTAGGAAGCTCTATATTCGTACTT
TTGCCGTTATCCCTCTAACAGAAGATTGTGGTATGGTGGAGTGGGTGCCC
CATACTCGTGGACTCCGGAATATACTTCAAGACATCTATATATCCTGCGG
CAAATTTGATAGACAGAAGACCAATCCCCAAATTAAACGAATTTATGATC
AATTCCAAGGTAAAATACCTGAAGATGAGATGTTGAAGACCAAGATCCTT
CCAATGTTTCCCCCGGTATTCCACAAATGGTTCTTGACGACATTTTCAGA
GCCTGCTGCATGGTTCAGGGCTCGGGTTGCCTATGCCCACACTACTGCAG
TTTGGTCAATGGTTGGGCATATTGTGGGGCTTGGTGATAGACATGGGGAA
AATATTCTCTTTGATTCTACCACAGGGGACTGTGTTCATGTTGATTTCAG
TTGCTTATTTGATAAAGGTTTGCTGTTGGAGAAGCCTGACCTGGTGCCGT
TCAGGCTAACCCAGAACATGATCGATGGCTTGGGCATCACTGGATATGAA
GGGTACATTTTGAGAGTTTGTGACATCCGCTTTCAGTTCTAAGAACTCCG
AGGGGAGAGTTTGATGAATGTCCTTGAAACTTTTATCATTACCCTCTTGT
GAAGTGGCCAGAACTCCCCAGTCCAGGGGGGGTGAACTTGACAAACCCCT
TCCCAACCGGCCATTATTAAATTTAACGCAACCTTCACGCGCCACTGTGT
GGTTTTGACACCTCGCCCCTCTCCTTCCTC
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