EY736258

Overview
NameEY736258
Unique NameEY736258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL91_ARATH (60S ribosomal protein L9-1 OS=Arabidopsis thaliana GN=RPL9B PE=2 SV=3)

HSP 1 Score: 311.612 bits (797), Expect = 3.597e-84
Identity = 150/187 (80.21%), Postives = 172/187 (91.98%), Query Frame = 2
Query:   17 SETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSERGQYLKK 577
            SETMDIPD V IK++AK++EVEGPRGKL RDFKHLNLDF L+ D ETGK+KLKID+WFG+RKTSA+IRTALSHV NLI+GVT+G+RYKMRFVYAHFPINASIG   KSIEIRNFLGEKKVRKV+MLDGVT+VRSEKVKDE++LDGNDIELVSRS ALINQKCHVK  D+RKFLDGIYVSE+ + +++
Sbjct:    7 SETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKIDSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKSKIVEE 193          
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL9_PEA (60S ribosomal protein L9 OS=Pisum sativum GN=RPL9 PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 6.136e-84
Identity = 154/182 (84.62%), Postives = 169/182 (92.86%), Query Frame = 2
Query:   17 SETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSERG 562
            SETM+IPDGV IK+NAK++EVEGPRGKL RDFKHLNLDF L+TDE  GK+KLKIDAWFGSRKTSAAIRTALSHV NLI GVTKG+RYKMRFVYA FPINASI N NKSIEIRNFLGEKKVRKVD+LDGV+++RSEKVKDE++LDGNDIELVSRS ALINQKCHVK  D+RKFLDGIYVSE+G
Sbjct:    7 SETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITDEN-GKKKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNFLGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKG 187          
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL92_ARATH (60S ribosomal protein L9-2 OS=Arabidopsis thaliana GN=RPL9D PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 3.045e-83
Identity = 150/183 (81.97%), Postives = 169/183 (92.35%), Query Frame = 2
Query:   17 SETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSERGQ 565
            SETMDIPDGV IK+NAK++EVEGPRGKL+RDFKHLNLDF L+ D+ TGKR+LKID+WFGSRKTSA+IRTALSHV NLI GVT+G+ Y+MRFVYAHFPINASI   NKSIEIRNFLGEKKVRKV+MLDGV +VRSEKVKDE+IL+GNDIELVSRS ALINQKCHVK  D+RKFLDGIYVSE+G+
Sbjct:    7 SETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKIDSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNFLGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGK 189          
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL9_ORYSJ (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica GN=RPL9 PE=2 SV=3)

HSP 1 Score: 293.508 bits (750), Expect = 1.014e-78
Identity = 143/182 (78.57%), Postives = 166/182 (91.21%), Query Frame = 2
Query:   17 SETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSERG 562
            SETM+IP+GV +++ AK+V VEGPRGKL+R+FKHLNLDF L+     G RKL++DAWFG+R+T AAIRTA+SHV NLI GVTKGYRYKMRFVYAHFPINASI N+N +IEIRNFLGEKKVRKVDML+GVT++RSEKVKDEL+LDGNDIELVSRSAALINQKCHVKN D+RKFLDGIYVS++G
Sbjct:    7 SETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLE----GGRKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKG 184          
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL9_ICTPU (60S ribosomal protein L9 OS=Ictalurus punctatus GN=rpl9 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.128e-52
Identity = 102/182 (56.04%), Postives = 130/182 (71.43%), Query Frame = 2
Query:   17 SETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSERG 562
            ++T+DIPD V + +  + V V+GPRG L R+F H+NL+  L+  ++   +KL++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +R+V M  GV    S   KDEL+L+GNDIELVS SAALI Q   VKN D+RKFLDGIYVSE+G
Sbjct:    7 TQTVDIPDNVDVTLKGRTVSVKGPRGVLRREFNHINLELRLLGKKQ---KKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNFLGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKG 185          
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL9_SPOFR (60S ribosomal protein L9 OS=Spodoptera frugiperda GN=RpL9 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.193e-52
Identity = 102/183 (55.74%), Postives = 132/183 (72.13%), Query Frame = 2
Query:   11 VRSETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSER 559
            V ++ + IP+G+ + + +++V V+GPRG L R+FKHL +D  ++       R LK++ WFGS+K  AA+RT  SHV N+I GVTKG++YKMR VYAHFPIN      N  IEIRNFLGEK +R+V M  GVTVV S K KDELI++GN +E VS SAALI Q   VKN D+RKFLDG+YVSE+
Sbjct:    5 VANQKVKIPEGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-----RVLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRSVYAHFPINCVTTEGNSVIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 182          
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL9_MOUSE (60S ribosomal protein L9 OS=Mus musculus GN=Rpl9 PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 6.193e-52
Identity = 103/182 (56.59%), Postives = 132/182 (72.53%), Query Frame = 2
Query:   17 SETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSERG 562
            ++T+DIP+ V+I +  + V V+GPRG L RDF H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +R+V M  GV    S+  KDELIL+GNDIELVS SAALI Q   VKN D+RKFLDGIYVSE+G
Sbjct:    7 NQTVDIPENVEITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKG 185          
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL9_MACFA (60S ribosomal protein L9 OS=Macaca fascicularis GN=RPL9 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.088e-52
Identity = 104/182 (57.14%), Postives = 131/182 (71.98%), Query Frame = 2
Query:   17 SETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSERG 562
            ++T+DIP+ V I +  + V V+GPRG L RDF H+N++  L+  +   K++L++D W+G+RK  A IRT  SHV N+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +R+V M  GV    S+  KDELIL+GNDIELVS SAALI Q   VKN D+RKFLDGIYVSE+G
Sbjct:    7 NQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATIRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKG 185          
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL9_BOVIN (60S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.088e-52
Identity = 103/182 (56.59%), Postives = 131/182 (71.98%), Query Frame = 2
Query:   17 SETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSERG 562
            ++T+DIP+ V I +  + V V+GPRG L RDF H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +R+V M  GV    S+  KDELIL+GNDIELVS SAALI Q   VKN D+RKFLDGIYVSE+G
Sbjct:    7 NQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKG 185          
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL9_RAT (60S ribosomal protein L9 OS=Rattus norvegicus GN=Rpl9 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.056e-51
Identity = 103/182 (56.59%), Postives = 131/182 (71.98%), Query Frame = 2
Query:   17 SETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSERG 562
            ++T+DIP+ V I +  + V V+GPRG L RDF H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +R+V M  GV    S+  KDELIL+GNDIELVS SAALI Q   VKN D+RKFLDGIYVSE+G
Sbjct:    7 NQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKG 185          
The following BLAST results are available for this feature:
BLAST of EY736258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
RL91_ARATH3.597e-8480.2160S ribosomal protein L9-1 OS=Arabidopsis thaliana... [more]
RL9_PEA6.136e-8484.6260S ribosomal protein L9 OS=Pisum sativum GN=RPL9 ... [more]
RL92_ARATH3.045e-8381.9760S ribosomal protein L9-2 OS=Arabidopsis thaliana... [more]
RL9_ORYSJ1.014e-7878.5760S ribosomal protein L9 OS=Oryza sativa subsp. ja... [more]
RL9_ICTPU2.128e-5256.0460S ribosomal protein L9 OS=Ictalurus punctatus GN... [more]
RL9_SPOFR6.193e-5255.7460S ribosomal protein L9 OS=Spodoptera frugiperda ... [more]
RL9_MOUSE6.193e-5256.5960S ribosomal protein L9 OS=Mus musculus GN=Rpl9 P... [more]
RL9_MACFA8.088e-5257.1460S ribosomal protein L9 OS=Macaca fascicularis GN... [more]
RL9_BOVIN8.088e-5256.5960S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=... [more]
RL9_RAT1.056e-5156.5960S ribosomal protein L9 OS=Rattus norvegicus GN=R... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-H12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736258 ID=EY736258; Name=EY736258; organism=Citrus sinensis; type=EST; length=859bp
CCACCCACGCGTCCGATCAGAGACGATGGACATCCCAGACGGGGTGAAAA
TCAAGATCAATGCTAAGATCGTCGAGGTTGAGGGGCCCAGAGGAAAGCTC
AGCCGGGATTTCAAGCACCTGAATCTCGACTTCCATCTGATGACCGACGA
GGAAACCGGGAAGCGGAAGCTCAAGATCGACGCTTGGTTCGGTTCTCGCA
AGACCAGCGCCGCCATCAGGACTGCCCTCAGCCACGTCGGGAATCTCATC
AACGGTGTCACCAAGGGATACCGCTACAAGATGAGATTCGTCTACGCTCA
CTTCCCCATCAACGCCTCCATCGGCAATGCCAACAAGTCCATCGAGATCC
GAAACTTTCTTGGGGAGAAGAAGGTTCGCAAAGTGGATATGCTTGATGGT
GTTACTGTTGTTCGGTCTGAGAAGGTTAAGGATGAACTCATTCTTGATGG
GAATGACATTGAGCTTGTGTCTCGGTCTGCTGCTCTGATCAACCAGAAAT
GCCATGTGAAGAACAACGACATGAGGAAATTCCTTGACGGGATCTATGTC
AGCGAGAGAGGCCAATATTTGAAGAAAACTGACGACTAGCTCTCAGTATG
ATGAAATTGGTGTGCTTGCTTTTGGAATTTTGCTCTTACCTTGGCTTGAC
GACATGCTGTTGGTCGGATGCGGCGATTACACACAGTCATGCCATCCACT
TGCTGGCTGCTGCTCCTATCGCTACCTTAGAACTATGGATTTTAACCTTC
CCCCTGTGGCAGAACAACCCGCCCACGCGCGCAGGACACCCGGCGGGGGG
CGGCCGCCCCGGGGGCCCCCCCCCCCTTGGGCTGCTTTCAAAGTCTGCGC
CCTCGTGTG
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