EY736244

Overview
NameEY736244
Unique NameEY736244
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length510
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9555 contig Csv1_Contig9555:59..568. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60A_ARATH (Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana GN=CPN60 PE=1 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 5.710e-64
Identity = 121/136 (88.97%), Postives = 133/136 (97.79%), Query Frame = 2
Query:  101 MYRFASSLASKARIARNSTQQIGNRLSWSRNYAAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            MYRFAS+LASKARIA+N+ +Q+ +R+SWSRNYAAK+I+FGVEARALMLKGVE+LADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDK+KN+GASLVKQVANATNDVAGDGTTCATVLTRAIF EGCK
Sbjct:    1 MYRFASNLASKARIAQNA-RQVSSRMSWSRNYAAKEIKFGVEARALMLKGVEDLADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFAEGCK 135          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60B_ARATH (Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g33210 PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 3.701e-63
Identity = 119/136 (87.50%), Postives = 130/136 (95.59%), Query Frame = 2
Query:  101 MYRFASSLASKARIARNSTQQIGNRLSWSRNYAAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            MYR  S++ASKARIAR  T QIG+RL+ +RNYAAKDIRFGVEARALML+GVE+LADAVKVTMGPKGRNV+IEQSWGAPKVTKDGVTVAKSIEFKD++KN+GASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK
Sbjct:    1 MYRLVSNVASKARIARKCTSQIGSRLNSTRNYAAKDIRFGVEARALMLRGVEDLADAVKVTMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRIKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 136          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH62_CUCMA (Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 4.834e-63
Identity = 119/136 (87.50%), Postives = 128/136 (94.12%), Query Frame = 2
Query:  101 MYRFASSLASKARIARNSTQQIGNRLSWSRNYAAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            M+RFAS LASKAR+AR    QI +R SWSRNYAAKD++FGVEAR LMLKGVE+LADAVKVTMGPKGRNVVIEQS+GAPKVTKDGVTVAKSIEFKDKVKN+GASLVKQVANATNDVAGDGTTCAT+LTRAIFTEGCK
Sbjct:    1 MHRFASGLASKARLARKGANQIASRSSWSRNYAAKDVKFGVEARGLMLKGVEDLADAVKVTMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGTTCATILTRAIFTEGCK 136          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH61_MAIZE (Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 4.092e-62
Identity = 121/138 (87.68%), Postives = 132/138 (95.65%), Query Frame = 2
Query:  101 MYRFASSLASKARIARNS--TQQIGNRLSWSRNYAAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            MYR A+SLASKAR A NS  T+Q+G+RL+WSRNYAAKDI+FGVEARALML+GVEELADAVKVTMGPKGRNVVIEQS+GAPKVTKDGVTVAKSIEFKD+VKN+GASLVKQVANATND AGDGTTCATVLT+AIFTEGCK
Sbjct:    1 MYRAAASLASKARQAGNSLATRQVGSRLAWSRNYAAKDIKFGVEARALMLRGVEELADAVKVTMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGDGTTCATVLTKAIFTEGCK 138          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH61_CUCMA (Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1 PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 2.652e-61
Identity = 115/136 (84.56%), Postives = 127/136 (93.38%), Query Frame = 2
Query:  101 MYRFASSLASKARIARNSTQQIGNRLSWSRNYAAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            M+RFA+ LASKAR+ARN   QI +R +W RNYAAKD++FGVEAR LMLKGVE+LADAVKVTMGPKGR VVIEQS+GAPKVTKDGVTVAKSIEFKDKVKN+GASLVKQVANATNDVAGDGTTCAT+LT+AIFTEGCK
Sbjct:    1 MHRFATGLASKARLARNGANQIASRSNWRRNYAAKDVKFGVEARGLMLKGVEDLADAVKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGTTCATILTKAIFTEGCK 136          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH62_MAIZE (Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 4.524e-61
Identity = 119/138 (86.23%), Postives = 132/138 (95.65%), Query Frame = 2
Query:  101 MYRFASSLASKARIARNST--QQIGNRLSWSRNYAAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            MYR A+SLASKAR A +S+  +Q+G+RL+WSRNYAAKDI+FGVEARALML+GVEELADAVKVTMGPKGRNVVIEQS+GAPKVTKDGVTVAKSIEFKD+VKN+GASLVKQVANATND AGDGTTCATVLT+AIFTEGCK
Sbjct:    1 MYRAAASLASKARQAGSSSAARQVGSRLAWSRNYAAKDIKFGVEARALMLRGVEELADAVKVTMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGDGTTCATVLTKAIFTEGCK 138          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_BRANA (Chaperonin CPN60, mitochondrial OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 4.682e-58
Identity = 115/139 (82.73%), Postives = 124/139 (89.21%), Query Frame = 2
Query:  101 MYRFASSLASKARIARNSTQQIGNRLSWSRNYAAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVAN---ATNDVAGDGTTCATVLTRAIFTEGCK 508
            MYR  SS+ASKAR+ARN T QIG+RLS +RNYAAKDIRFGVE RALML+GVEELADAVKVT+ PKGRNV+IEQSWGAPKVTKDGVTVAKSIEFKD+VKN+GASLVKQVAN     N   GDGTTCATVLTRAIFTEGCK
Sbjct:    1 MYRLISSIASKARVARNCTSQIGSRLSSTRNYAAKDIRFGVEGRALMLRGVEELADAVKVTIPPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANRPTQLNRCLGDGTTCATVLTRAIFTEGCK 139          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60C_ARATH (Chaperonin CPN60-like 2, mitochondrial OS=Arabidopsis thaliana GN=At3g13860 PE=1 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 7.753e-45
Identity = 93/136 (68.38%), Postives = 108/136 (79.41%), Query Frame = 2
Query:  101 MYRFASSLASKARIARNSTQQIGNRLSWSRNYAAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            MYR  S L+S    +  S + +  R+  SRNYAAKDI FG+ ARA ML+GV E+A+AVKVTMGPKGRNV+IE S+G PK+TKDGVTVAKSI F+ K KNIGA LVKQVA+ATN VAGDGTTCATVLT+AI  EGCK
Sbjct:    1 MYRVLSKLSSSIG-SSTSRKLVSGRIISSRNYAAKDISFGIGARAAMLQGVSEVAEAVKVTMGPKGRNVIIESSYGGPKITKDGVTVAKSISFQAKAKNIGAELVKQVASATNKVAGDGTTCATVLTQAILIEGCK 135          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60C_DROME (60 kDa heat shock protein homolog 2, mitochondrial OS=Drosophila melanogaster GN=Hsp60C PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 5.750e-40
Identity = 85/134 (63.43%), Postives = 103/134 (76.87%), Query Frame = 2
Query:  101 MYRFASSLASKARIARNSTQQIGNRLSWSRNYAAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEG 502
            M+R+ ++L   A+I+          + W+RNYA KD+RFG E RA+ML+GV+ LADAV VTMGPKGRNV+IEQSWG+PK+TKDGVTVAKSI  KDK +NIGA LV+ VAN TN+ AGDGTT ATVL RAI  EG
Sbjct:    4 MFRYTNTLQRTAKISH---------VLWARNYA-KDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEG 127          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_DROME (60 kDa heat shock protein, mitochondrial OS=Drosophila melanogaster GN=Hsp60 PE=1 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 1.199e-37
Identity = 82/114 (71.93%), Postives = 92/114 (80.70%), Query Frame = 2
Query:  173 RLSWSRNYA----AKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEG 502
            R S SR  A    AKD+RFG E RA+ML+GV+ LADAV VTMGPKGRNV+IEQSWG+PK+TKDGVTVAKSIE KDK +NIGA LV+ VAN TN+ AGDGTT ATVL RAI  EG
Sbjct:   10 RSSISRQLAMRGYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEG 123          
The following BLAST results are available for this feature:
BLAST of EY736244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60A_ARATH5.710e-6488.97Chaperonin CPN60, mitochondrial OS=Arabidopsis tha... [more]
CH60B_ARATH3.701e-6387.50Chaperonin CPN60-like 1, mitochondrial OS=Arabidop... [more]
CH62_CUCMA4.834e-6387.50Chaperonin CPN60-2, mitochondrial OS=Cucurbita max... [more]
CH61_MAIZE4.092e-6287.68Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=C... [more]
CH61_CUCMA2.652e-6184.56Chaperonin CPN60-1, mitochondrial OS=Cucurbita max... [more]
CH62_MAIZE4.524e-6186.23Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=C... [more]
CH60_BRANA4.682e-5882.73Chaperonin CPN60, mitochondrial OS=Brassica napus ... [more]
CH60C_ARATH7.753e-4568.38Chaperonin CPN60-like 2, mitochondrial OS=Arabidop... [more]
CH60C_DROME5.750e-4063.4360 kDa heat shock protein homolog 2, mitochondrial... [more]
CH60_DROME1.199e-3771.9360 kDa heat shock protein, mitochondrial OS=Drosop... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736244 ID=EY736244; Name=EY736244; organism=Citrus sinensis; type=EST; length=510bp
CACGCGTCCGCGGACGCGTGGGGTCGCCTCTCCTTCTATCTCTGCCACTA
GACTGTTACTCTCGGCTTCCTCTTCTCTGCAATTTTACGAAACTGCCACT
ATGTATCGTTTCGCTTCAAGCCTCGCTTCCAAAGCAAGGATCGCTAGGAA
CAGTACCCAGCAGATTGGAAATAGATTGAGTTGGTCCAGAAACTATGCTG
CCAAAGACATTAGATTTGGGGTTGAAGCTCGAGCTTTGATGCTGAAGGGT
GTTGAAGAGCTCGCCGATGCGGTCAAAGTCACCATGGGACCTAAGGGGCG
TAATGTGGTCATTGAACAAAGCTGGGGTGCTCCCAAGGTGACAAAAGATG
GTGTTACTGTTGCAAAGAGCATTGAATTCAAAGATAAAGTCAAGAACATT
GGTGCTAGCCTTGTGAAGCAAGTTGCTAATGCCACCAATGATGTTGCTGG
TGATGGAACTACCTGTGCAACAGTTCTTACCCGAGCAATATTTACAGAAG
GCTGCAAGTC
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