EY736231

Overview
NameEY736231
Unique NameEY736231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1521 contig Csv1_Contig1521:11..869. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY736231 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 2.528e-20
Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 1 
Query:  268 NVWRSVFHPGSNLATRGIGAEVFDKPTHPNSPTVYD 375
            NVWRSVFHPGSNL+++ +G +VFD P  PNSPTVYD
Sbjct:   64 NVWRSVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYD 98

HSP 2 Score: 53.9138 bits (128), Expect = 2.528e-20
Identity = 24/38 (63.16%), Postives = 32/38 (84.21%), Query Frame = 2 
Query:   50 MLEKLWDDVVAGPQPDRGLGRLRKITTTPLAVKEGGEA 163
            +L+KLWDD+VAGPQP+RGLG LRK+   PL +K+ GE+
Sbjct:    3 LLDKLWDDIVAGPQPERGLGMLRKV-PQPLNLKDEGES 39

HSP 3 Score: 27.335 bits (59), Expect = 2.528e-20
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 3 
Query:  462 LYSGETRSKHH 494
            +YSGETRSKHH
Sbjct:  100 MYSGETRSKHH 110
The following BLAST results are available for this feature:
BLAST of EY736231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN2.528e-2072.22Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-E08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736231 ID=EY736231; Name=EY736231; organism=Citrus sinensis; type=EST; length=857bp
CCACGCGTCCGCGGACGCGTGGGCTAGCAGCTAAATTGTAAATTTAAAGA
TGCTAGAGAAGCTTTGGGACGATGTTGTGGCAGGGCCTCAGCCTGATCGT
GGCCTTGGCAGGCTGAGGAAAATCACCACAACACCCTTAGCAGTCAAAGA
GGGTGGTGAGGCGGAGTCGTCGTCGGGCAAGTTCCAGAGGTCTCTGTCAA
TGCCAGCGAGTCCAGGGGCACCGTCGACGCCAGTGACGCCGACGACGCCG
CTGTCGCGCGTAAGGACAACGTGTGGAGGAGCGTGTTTCACCCCGGTAGC
AACCTTGCTACTAGGGGTATCGGTGCAGAGGTCTTTGACAAGCCCACACA
TCCTAACTCTCCCACTGTTTATGACTGCAACCAAATAAAGGCTAAGAGGA
AGGAGGAAAACGTGGCACTCTGTCTCATGGGCGCGTTGAAATAGATTTTT
GTCTTATTCAGCTTTACAGTGGGGAGACTAGGAGCAAGCATCATCACTGA
GTGGATGATACGCTCCAGCGATGTAAATGAATGTGATGGGTCACCAACTC
ACCGGATGAGTTGCCTGTAGTCTGTAGATAGTGTCGTTTCGTTTTGGATT
TCGCAACGTGTCCTTGTCGTNTTGTTAATGCTATTTGTATTACGTGTCCT
TCCTATCTAAAGTTTGGTTTTAAAATGCTGCTGACTAAAAGTAAACTAAA
GACTGTGATGNTTTTATATCATATAATTTAATAATTGTATGTGATGTGAG
GATTGCTAANCTGTGGGCGGAAATGAAAGGTTGCTGGTTTTTGGGTTTAG
GACATGTTTTGGATTGTCATTTTGTAAGAGCCAGATCATCCCTTCCTGGA
CGGGCCT
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