EY736215

Overview
NameEY736215
Unique NameEY736215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736215 vs. ExPASy Swiss-Prot
Match: NDUA9_RAT (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (Fragment) OS=Rattus norvegicus GN=Ndufa9 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.105e-32
Identity = 73/143 (51.05%), Postives = 102/143 (71.33%), Query Frame = 2
Query:  173 LVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAWIAQEHGGLGRFIPISWLRGIFLISIRSV 601
            ++  G GGRSSVSG++ATVFG TGFLGRYVV  L +MGSQV++P+R    D  HL+LMGDLGQ++ ++++ RD ++I+  +  +NVVINLIGRE+ETRN+ FEDV   +   IA  ++E  G+ RFI +S L      S +S+
Sbjct:   33 VIPHGKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDIYDTMHLRLMGDLGQLIFLEWDARDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKE-AGVERFIHVSHLNASMKSSAKSL 174          
BLAST of EY736215 vs. ExPASy Swiss-Prot
Match: NDUA9_PANTR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pan troglodytes GN=NDUFA9 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.221e-31
Identity = 70/132 (53.03%), Postives = 100/132 (75.76%), Query Frame = 2
Query:  173 LVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAWIAQEHGGLGRFIPISWL 568
            L+  G GGRSSVSGI+ATVFG TGFLGRYVV  L +MGSQV++P+R  + D  HL+ MGDLGQ++ ++++ RD ++I+  +  +NVVINLIGR++ET+NY FEDV   + + IA +++E  G+ +FI +S L
Sbjct:   40 LMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNYDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170          
BLAST of EY736215 vs. ExPASy Swiss-Prot
Match: NDUA9_PONPY (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pongo pygmaeus GN=NDUFA9 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.595e-31
Identity = 70/132 (53.03%), Postives = 99/132 (75.00%), Query Frame = 2
Query:  173 LVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAWIAQEHGGLGRFIPISWL 568
            L+  G GGRSSVSGI+ATVFG TGFLGRYVV  L +MGSQV++P+R    D  HL+ MGDLGQ++ ++++ RD ++I+  +  +NVVINLIGR++ETRN+ FEDV   + + IA +++E  G+ +FI +S L
Sbjct:   40 LIPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETRNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170          
BLAST of EY736215 vs. ExPASy Swiss-Prot
Match: NDUA9_PONAB (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pongo abelii GN=NDUFA9 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.595e-31
Identity = 70/132 (53.03%), Postives = 99/132 (75.00%), Query Frame = 2
Query:  173 LVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAWIAQEHGGLGRFIPISWL 568
            L+  G GGRSSVSGI+ATVFG TGFLGRYVV  L +MGSQV++P+R    D  HL+ MGDLGQ++ ++++ RD ++I+  +  +NVVINLIGR++ETRN+ FEDV   + + IA +++E  G+ +FI +S L
Sbjct:   40 LIPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETRNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170          
BLAST of EY736215 vs. ExPASy Swiss-Prot
Match: NDUA9_GORGO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFA9 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 2.083e-31
Identity = 69/132 (52.27%), Postives = 100/132 (75.76%), Query Frame = 2
Query:  173 LVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAWIAQEHGGLGRFIPISWL 568
            L+  G GGRSSVSGI+ATVFG TGFLGRYVV  L +MGSQV++P+R  + D  HL+ MGDLGQ++ ++++ RD ++I+  +  +NVVINLIGR++ET+N+ FEDV   + + IA +++E  G+ +FI +S L
Sbjct:   40 LIPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170          
BLAST of EY736215 vs. ExPASy Swiss-Prot
Match: NDUA9_BOVIN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Bos taurus GN=NDUFA9 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.083e-31
Identity = 72/132 (54.55%), Postives = 97/132 (73.48%), Query Frame = 2
Query:  173 LVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAWIAQEHGGLGRFIPISWL 568
            ++  G GGRSSVSGI+ATVFG TGFLGRYVV  L +MGSQV+VP R    D  HL+ MGDLGQI+ M +N RD ++I+  +  ++VVINL+GRE+ET+N+ FEDV   + + IA +++E  G+ +FI IS L
Sbjct:   40 VIPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPHRCEPYDTMHLRPMGDLGQIIFMDWNGRDKDSIRRAVEHSSVVINLVGREWETQNFDFEDVFVKIPQAIAQVSKE-AGVEKFIHISHL 170          
BLAST of EY736215 vs. ExPASy Swiss-Prot
Match: NDUA9_MOUSE (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Mus musculus GN=Ndufa9 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.721e-31
Identity = 72/143 (50.35%), Postives = 100/143 (69.93%), Query Frame = 2
Query:  173 LVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAWIAQEHGGLGRFIPISWLRGIFLISIRSV 601
            ++  G GGRSSVSG++ATVFG TGFLGRYVV  L +MGSQV++P+R    D  HL+LMGD GQ+  ++++ RD ++I+  +  +NVVINLIGRE+ETRN+ FEDV   +   IA  ++E  G+ RFI +S L      S +S+
Sbjct:   40 VIPHGKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDVYDIMHLRLMGDPGQLTFLEWDARDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKE-AGVERFIHVSHLNASMKSSSKSL 181          
BLAST of EY736215 vs. ExPASy Swiss-Prot
Match: NDUA9_HUMAN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Homo sapiens GN=NDUFA9 PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 3.554e-31
Identity = 69/132 (52.27%), Postives = 100/132 (75.76%), Query Frame = 2
Query:  173 LVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAWIAQEHGGLGRFIPISWL 568
            L+  G GGRSSVSGI+ATVFG TGFLGRYVV  L +MGSQV++P+R  + D  HL+ MGDLGQ++ ++++ RD ++I+  +  +NVVINLIGR++ET+N+ FEDV   + + IA +++E  G+ +FI +S L
Sbjct:   40 LMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170          
BLAST of EY736215 vs. ExPASy Swiss-Prot
Match: NDUA9_DICDI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Dictyostelium discoideum GN=ndufa9 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.678e-29
Identity = 66/143 (46.15%), Postives = 101/143 (70.63%), Query Frame = 2
Query:  146 SVATPGTGHLVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP-RHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAWIAQEHGGLGRFIPISWLR 571
            S +T     L R   G R+  +G++ATVFG TGF GRY+VQ LA+ G QV+VP+R CED+  R LK++G+LGQI+P++F+ RD  +I+  ++ +N+VIN+ GR+YETRN+S +D+N   A RIA +++    + ++I +S LR
Sbjct:   17 SFSTINENPLTRIHHGSRTQTTGLVATVFGATGFTGRYLVQLLARTGIQVVVPYR-CEDEGFRDLKVLGELGQIIPVRFDIRDSESIERAISHSNIVINMAGRDYETRNFSLDDINVHAASRIADLSK---NVEKYIHVSTLR 155          
BLAST of EY736215 vs. ExPASy Swiss-Prot
Match: NDUA9_NEUCR (NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial OS=Neurospora crassa GN=nuo-40 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.545e-26
Identity = 67/150 (44.67%), Postives = 99/150 (66.00%), Query Frame = 2
Query:  113 NGADHRRFGSTSVATPGTGHLVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAWIAQEHGGLGRFIPIS 562
            N    +R   + V    TG  + +  GGRSS+ G  ATVFG TG LGRY+V +LA+ G  V++PFR  E + RHLK+ GDLG++V ++F+ R+  +I+ ++  ++VV NLIGR+Y T+N+SFEDV+   AERIA    ++  + RFI +S
Sbjct:   18 NAFGFQRRAISDVTITRTGKPIIRNQGGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVIPFRD-EYNKRHLKVTGDLGKVVMIEFDLRNTQSIEESVRHSDVVYNLIGRDYPTKNFSFEDVHIEGAERIAEAVAKY-DVDRFIHVS 165          
The following BLAST results are available for this feature:
BLAST of EY736215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
NDUA9_RAT1.105e-3251.05NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
NDUA9_PANTR1.221e-3153.03NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
NDUA9_PONPY1.595e-3153.03NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
NDUA9_PONAB1.595e-3153.03NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
NDUA9_GORGO2.083e-3152.27NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
NDUA9_BOVIN2.083e-3154.55NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
NDUA9_MOUSE2.721e-3150.35NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
NDUA9_HUMAN3.554e-3152.27NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
NDUA9_DICDI9.678e-2946.15NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
NDUA9_NEUCR1.545e-2644.67NADH-ubiquinone oxidoreductase 40 kDa subunit, mit... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-D01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736215 ID=EY736215; Name=EY736215; organism=Citrus sinensis; type=EST; length=863bp
CCACGCGTCCGCAACGATGCAGGCCATCACAAGGCGATTAAGGCACCAAT
CTGTACAGCCCGCAACTTCCATTTCTTCTCTTAAATCGGTTTACCCGCTC
TCCGATTACTATAATGGAGCTGATCATCGGAGATTTGGATCTACTTCGGT
CGCCACTCCCGGTACCGGCCACCTTGTTCGTAAGGGCACTGGTGGAAGAT
CTTCTGTTAGTGGCATTATAGCTACAGTGTTTGGCACAACTGGGTTCCTT
GGACGTTATGTTGTGCAACAACTTGCTAAAATGGGATCTCAAGTGCTAGT
TCCTTTCCGGGGCTGTGAGGATGATCCTCGTCATCTCAAGTTGATGGGAG
ATTTGGGACAGATTGTACCGATGAAGTTTAACCCAAGAGACGATAACACA
ATCAAGGCTACAATGGCAAAGGCTAATGTTGTTATCAATCTTATTGGAAG
AGAGTATGAGACCAGAAACTACAGCTTTGAGGATGTGAACCATTTTATGG
CTGAACGCATTGCCTGGATTGCACAAGAACATGGTGGGCTCGGGAGATTT
ATTCCAATTTCTTGGCTTAGGGGCATCTTCCTCATCTCCATCAGAAGTGT
TTAGTGCTGAAGGCGCGTGCTGAGGGAACCTGTGTTGAGAGAAATTCCTT
GGGGCCCCAATTGTTGAAGGCCTGGTGCCATGATTGGGTTCCCGGGCATC
GCCCTTTCCAATAAGGTGGGCCCCGTTTGGTAGAACATGGGAGTTGTGGC
CCCCCCTTGGGGGGGGGGGCGCGCCCGGAACTCCCCCCCCCCCGTCCGGC
CACGCCCCCTGTGGCCTTTCCGCTCCCTCTTTCCACACTGGGGGCCCCCC
CTGTCACAATCTA
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