EY736210

Overview
NameEY736210
Unique NameEY736210
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig980 contig Csv1_Contig980:350..1177. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY736210 vs. ExPASy Swiss-Prot
Match: RHM1_ARATH (Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=2 SV=1)

HSP 1 Score: 422.935 bits (1086), Expect = 1.047e-117
Identity = 204/219 (93.15%), Postives = 212/219 (96.80%), Query Frame = 3
Query:   12 CESHKTDTIRTNVAGTLTLADVCREHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKYVFEPNKKT 668
            CESHKT+TIR NVAGTLTLADVCREHG+LMMN+ATGCIFEYD  HPEGSGIG+KEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNL+GIWNFTNPGVVSHNEILEMY+ YINPEFKW NFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIK+SLIKY + PNKKT
Sbjct:  451 CESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYAYGPNKKT 669          
BLAST of EY736210 vs. ExPASy Swiss-Prot
Match: RHM3_ARATH (Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=2 SV=1)

HSP 1 Score: 413.305 bits (1061), Expect = 8.297e-115
Identity = 198/219 (90.41%), Postives = 210/219 (95.89%), Query Frame = 3
Query:   12 CESHKTDTIRTNVAGTLTLADVCREHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKYVFEPNKKT 668
            CESHKT+TIR NVAGTLTLADVCRE+ +LMMN+ATGCIFEYDAAHPEGSGIG+KEED PNFTGSFYSKTKAMVEELL+E+DNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMT+LDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYK YI P+FKW NF LEEQAKVIVAPRSNNEMD +KL KEFPE+LSIKDSLIKYVFEPNK+T
Sbjct:  446 CESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKWSNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKYVFEPNKRT 664          
BLAST of EY736210 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1)

HSP 1 Score: 400.208 bits (1027), Expect = 7.268e-111
Identity = 193/219 (88.13%), Postives = 206/219 (94.06%), Query Frame = 3
Query:   12 CESHKTDTIRTNVAGTLTLADVCREHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKYVFEPNKKT 668
            CESHK +TIR NVAGTLTLADVCRE+ +LMMN+ATGCIFEYDA HPEGSGIG+KEED PNF GSFYSKTKAMVEELL+E+DNVCTLRVRMPISSDLNNPRNFITKISRYNKVV+IPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYK YI P FKW NFT+EEQAKVIVA RSNNEMD SKL KEFPE+LSIK+SL+KYVFEPNK+T
Sbjct:  449 CESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFKWSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVFEPNKRT 667          
BLAST of EY736210 vs. ExPASy Swiss-Prot
Match: YL780_MIMIV (Uncharacterized protein L780 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L780 PE=4 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.353e-40
Identity = 86/213 (40.38%), Postives = 132/213 (61.97%), Query Frame = 3
Query:   30 DTIRTNVAGTLTLADVCREHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN-VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPE----LLSIKDSLIKYVFE 653
            + ++ N+ G L LA +C+++ I +    TGCIFE    +      G+ E D PNF GS YS  K   + L+  +DN V  LR+RMPI+ +  NPR+FITKI  Y+++ +IPNSMT+LD+++P+ I+MA+    G +NFTNPG+VSHNEIL + +    P   W N + E+Q  ++ A RSNN ++  KL+  +P+    L  I++ + K  F+
Sbjct:   78 ENVKDNLYGPLCLAFICQKYNIHLTYLGTGCIFE-GQNNFSADEKGFTENDKPNFFGSSYSVVKGFTDRLMHFFDNDVLNLRIRMPITIE-QNPRSFITKILSYSRICSIPNSMTILDQMIPVMIDMARNKTTGTFNFTNPGLVSHNEILSLIRDIHKPNLTWENMSREQQLAILKADRSNNLLNTDKLQSLYPDVPDILTGIREVVSKMKFQ 288          
The following BLAST results are available for this feature:
BLAST of EY736210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
RHM1_ARATH1.047e-11793.15Probable rhamnose biosynthetic enzyme 1 OS=Arabido... [more]
RHM3_ARATH8.297e-11590.41Probable rhamnose biosynthetic enzyme 3 OS=Arabido... [more]
RHM2_ARATH7.268e-11188.13Probable rhamnose biosynthetic enzyme 2 OS=Arabido... [more]
YL780_MIMIV1.353e-4040.38Uncharacterized protein L780 OS=Acanthamoeba polyp... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-C08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736210 ID=EY736210; Name=EY736210; organism=Citrus sinensis; type=EST; length=827bp
CCACGCGTCCGTGTGAATCTCATAAAACTGACACCATTCGCACCAATGTT
GCTGGAACCTTAACCTTGGCAGATGTTTGCAGAGAACATGGGATCTTGAT
GATGAATTATGCTACCGGTTGCATATTTGAGTATGATGCTGCTCATCCTG
AGGGCTCTGGCATTGGGTATAAAGAGGAAGATACACCCAATTTTACTGGT
TCTTTCTACTCAAAAACCAAGGCCATGGTTGAAGAGCTGTTGAAAGAATA
CGACAATGTTTGCACTCTCAGAGTCCGAATGCCAATATCTTCTGACCTAA
ACAACCCCCGCAACTTCATTACCAAGATTTCTCGTTATAACAAGGTGGTC
AACATTCCAAACAGTATGACTGTTTTGGATGAACTTCTCCCCATTTCAAT
TGAGATGGCAAAGCGTAACTTGAGGGGTATTTGGAACTTCACAAACCCTG
GGGTTGTGAGCCACAATGAAATTCTTGAGATGTACAAGAAGTACATTAAC
CCAGAATTCAAGTGGGTGAACTTCACATTAGAAGAGCAAGCAAAGGTGAT
AGTCGCCCCAAGAAGCAACAACGAGATGGATGCTTCTAAGTTGAAGAAGG
AGTTCCCTGAGTTGCTATCCATCAAGGATTCACTGATCAAGTATGTCTTT
GAGCCCAACAAGAAAACCTAGGGTACATTAAGCAGCTTTCAGTTGTAGGG
GCCTCTTGTNTGACCAACACATTCTGCATTACATAATANGGTTGGAGTAC
CATTGTACTGTTTATCAGCTTTACTCCTCATTTCTTTTTGGTGTATCACT
TTATATTTACTGCACTAGAGATAATAG
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