EY736204

Overview
NameEY736204
Unique NameEY736204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length207
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_PSEFS (3-dehydroquinate synthase OS=Pseudomonas fluorescens (strain SBW25) GN=aroB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.755e-19
Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQP  VLIDTAT+NTLPP ELSAGLAEVIKYG+ICDEPFL WLEEHV
Sbjct:  153 GAFYQPQAVLIDTATLNTLPPRELSAGLAEVIKYGLICDEPFLTWLEEHV 202          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_PSEU2 (3-dehydroquinate synthase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=aroB PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.323e-18
Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQP+VVLIDTA++NTLP  ELSAGLAEVIKYG+ICDEPFL WLEEHV
Sbjct:  153 GAFYQPSVVLIDTASLNTLPERELSAGLAEVIKYGLICDEPFLTWLEEHV 202          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_PSESM (3-dehydroquinate synthase OS=Pseudomonas syringae pv. tomato GN=aroB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.840e-17
Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQP+VVLIDT ++NTLP  ELSAGLAEVIKYG+ICDEPFL WLEEHV
Sbjct:  153 GAFYQPSVVLIDTTSLNTLPERELSAGLAEVIKYGLICDEPFLTWLEEHV 202          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_PSE14 (3-dehydroquinate synthase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=aroB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.840e-17
Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQP+VVLIDT ++NTLP  ELSAGLAEVIKYG+ICDEPFL WLEEHV
Sbjct:  153 GAFYQPSVVLIDTTSLNTLPERELSAGLAEVIKYGLICDEPFLTWLEEHV 202          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_PSEF5 (3-dehydroquinate synthase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=aroB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.138e-17
Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQPNVVLIDT ++NTLP  ELSAGLAEVIKYG+ICDEPFL WLEE+V
Sbjct:  153 GAFYQPNVVLIDTTSLNTLPSRELSAGLAEVIKYGLICDEPFLTWLEENV 202          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_PSEPF (3-dehydroquinate synthase OS=Pseudomonas fluorescens (strain Pf0-1) GN=aroB PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.192e-16
Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQPNVVLIDTA++ TLP  ELSAGLAEVIKYG+ICDEPFL WLE++V
Sbjct:  153 GAFYQPNVVLIDTASLKTLPARELSAGLAEVIKYGLICDEPFLTWLEDNV 202          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_PSEPW (3-dehydroquinate synthase OS=Pseudomonas putida (strain W619) GN=aroB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.656e-16
Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQPN VLIDT T+NTLP  ELSAGLAEVIKYG+ICD+PFL WLE+++
Sbjct:  153 GAFYQPNAVLIDTTTLNTLPERELSAGLAEVIKYGLICDKPFLGWLEDNI 202          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_AZOVD (3-dehydroquinate synthase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=aroB PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.918e-16
Identity = 38/51 (74.51%), Postives = 42/51 (82.35%), Query Frame = -3
Query:   53 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHVA 205
            G  YQP  V+IDTAT+ TLP  ELSAGLAEVIKYG+ICDEPFL WLE H+A
Sbjct:  153 GAFYQPKAVVIDTATLATLPERELSAGLAEVIKYGLICDEPFLGWLETHMA 203          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_PSEAB (3-dehydroquinate synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=aroB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.722e-15
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQP  V+IDTA++ TLP  ELSAGLAEVIKYG ICDEPF+ WLEEH+
Sbjct:  153 GAFYQPQAVVIDTASLKTLPSRELSAGLAEVIKYGFICDEPFITWLEEHM 202          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_PSEA8 (3-dehydroquinate synthase OS=Pseudomonas aeruginosa (strain LESB58) GN=aroB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.722e-15
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQP  V+IDTA++ TLP  ELSAGLAEVIKYG ICDEPF+ WLEEH+
Sbjct:  153 GAFYQPQAVVIDTASLKTLPSRELSAGLAEVIKYGFICDEPFITWLEEHM 202          
The following BLAST results are available for this feature:
BLAST of EY736204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
AROB_PSEFS9.755e-1984.003-dehydroquinate synthase OS=Pseudomonas fluoresce... [more]
AROB_PSEU26.323e-1882.003-dehydroquinate synthase OS=Pseudomonas syringae ... [more]
AROB_PSESM1.840e-1780.003-dehydroquinate synthase OS=Pseudomonas syringae ... [more]
AROB_PSE141.840e-1780.003-dehydroquinate synthase OS=Pseudomonas syringae ... [more]
AROB_PSEF53.138e-1780.003-dehydroquinate synthase OS=Pseudomonas fluoresce... [more]
AROB_PSEPF1.192e-1678.003-dehydroquinate synthase OS=Pseudomonas fluoresce... [more]
AROB_PSEPW2.656e-1674.003-dehydroquinate synthase OS=Pseudomonas putida (s... [more]
AROB_AZOVD5.918e-1674.513-dehydroquinate synthase OS=Azotobacter vinelandi... [more]
AROB_PSEAB1.722e-1572.003-dehydroquinate synthase OS=Pseudomonas aeruginos... [more]
AROB_PSEA81.722e-1572.003-dehydroquinate synthase OS=Pseudomonas aeruginos... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-C01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736204 ID=EY736204; Name=EY736204; organism=Citrus sinensis; type=EST; length=207bp
AAAGAAGGAGAGGGAACCCCGTCCCCTTGCGTGATACCGTCCGGAATCCC
GGGGCGACATGCTCTTCCAGCCANCTCAGGAAAGGCTCATCGCATATCAT
GCCGTACTTGATGACTTCCGCCAAGCCTGCCGACAGCTCGCTGGGCGGCA
GGGTATTGACGGTGGCGGTGTCGATCAGCACGACATTCGGCTGATACAAC
CCACCCA
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