EY736125
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY736125 vs. ExPASy Swiss-Prot
Match: HDT2_MAIZE (Histone deacetylase HDT2 OS=Zea mays GN=HDT2 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.708e-21 Identity = 50/87 (57.47%), Postives = 63/87 (72.41%), Query Frame = 2 Query: 419 TPKKAESSKKRPVESASKTYVPDKKAXFVTP--QKTEEKKGVSHIATPHPSKKSAKTPANNDQTKQQPHKSGGSFPCKSCNRSFTTE 673 TPKK E+ KKR E+A KT + DKKA TP QKT KKG +H+ATPHP+K KTPANND+ ++ KSGGS PCKSC+++F +E Sbjct: 205 TPKKPEAGKKRGAENALKTPLSDKKAKVATPPAQKTGGKKGATHVATPHPAK--GKTPANNDKLTEKSPKSGGSVPCKSCSKTFNSE 289 HSP 2 Score: 22.3274 bits (46), Expect = 1.708e-21 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 681 LHSHTKAKHGA 713 L +H+KAKHGA Sbjct: 292 LQAHSKAKHGA 302
BLAST of EY736125 vs. ExPASy Swiss-Prot
Match: HDT1_SOLCH (Histone deacetylase HDT1 OS=Solanum chacoense GN=HDT1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.416e-19 Identity = 53/102 (51.96%), Postives = 66/102 (64.71%), Query Frame = 2 Query: 419 TPKKAESSKKRPVESASKTYVPDKKAXFVTPQKTEEKKGVSHIATPHPSKKSAKTPANNDQTKQQPHKSGGSFPCKSCNRSFTTERWFAFSYKSQARCSSMK 724 TPKKAE +K+R +SA+KT V DKKA TPQKT+ KKG H+ATPHPSK+++KTP KS GS CK CNRSF +E A S+A+ S+ K Sbjct: 181 TPKKAEPAKRRKADSATKTPVTDKKAKLTTPQKTDGKKGGGHVATPHPSKQASKTP-----------KSAGSHHCKPCNRSFGSEG--ALDSHSKAKHSAGK 269
BLAST of EY736125 vs. ExPASy Swiss-Prot
Match: HDT3_ARATH (Histone deacetylase HDT3 OS=Arabidopsis thaliana GN=HDT3 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 7.225e-19 Identity = 46/90 (51.11%), Postives = 57/90 (63.33%), Query Frame = 2 Query: 419 TPKKAESSKKRPVE-SASKTYVPDKKAXFVTPQKTEEKKGVSHIATPHPSKKSAKTPANND----QTKQQPHKSGGSFPCKSCNRSFTTE 673 TPKK E KKR E ++SK +KKA FVTPQKT+ KK H+ATPHPSK++ K +QQ KS G+F CKSC R+FT+E Sbjct: 190 TPKKPEEPKKRSAEPNSSKNPASNKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTFTSE 279 HSP 2 Score: 26.1794 bits (56), Expect = 7.225e-19 Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 678 GLHSHTKAKHGAPA 719 GL SHTKAKH A A Sbjct: 281 GLQSHTKAKHSAAA 294
BLAST of EY736125 vs. ExPASy Swiss-Prot
Match: HDT1_SOYBN (Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.194e-17 Identity = 45/83 (54.22%), Postives = 53/83 (63.86%), Query Frame = 2 Query: 425 KKAESSKKRPVESASKTYVPDKKAXFVTPQKTEEKKGVSHIATPHPSKKSAKTPANNDQTKQQPHKSGGSFPCKSCNRSFTTE 673 KK + KKRP ESA+KT + KKA TP+KT+ KK V H+ATPHPSKK KTP + TK Q S G C SC +SFT E Sbjct: 203 KKVDQGKKRPNESAAKTPISAKKAKTATPEKTDGKKSV-HVATPHPSKKGGKTP---NSTKGQTPNSAGQLSCASCKKSFTNE 281 HSP 2 Score: 22.3274 bits (46), Expect = 2.194e-17 Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 3 Query: 672 KGGLHSHTKAKHG 710 + GL H KAKHG Sbjct: 281 EAGLQQHKKAKHG 293
BLAST of EY736125 vs. ExPASy Swiss-Prot
Match: HDT1_MAIZE (Histone deacetylase HDT1 OS=Zea mays GN=HDT1 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.320e-16 Identity = 54/113 (47.79%), Postives = 70/113 (61.95%), Query Frame = 2 Query: 419 TPKKAESSKKRPVESAS-KTYVPDKKAXFVTP--QKTEEKKGVS-HIATPHPSKKSAKTPANNDQTKQQPH---KSGGSFPCKSCNRSFTTERWFAFSYKSQARCSSMKDGVE 736 TPKK E KKRP ES+ KT + DKKA TP QKT KKG + H+ATPHP+K KT NND++ + P KSGGS PCK C++SF +E A S+A+ + + V+ Sbjct: 199 TPKKPEVGKKRPAESSVLKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPAK--GKTIVNNDKSVKSPKSAPKSGGSVPCKPCSKSFISET--ALQAHSRAKMGASESQVQ 307
BLAST of EY736125 vs. ExPASy Swiss-Prot
Match: HDT3_MAIZE (Histone deacetylase HDT3 OS=Zea mays GN=HDT3 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.893e-13 Identity = 46/90 (51.11%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 419 TPKKAESSKKRPVESAS-KTYVPDKKAXFVTP--QKTEEKKGVS-HIATPHPSKKSAKTPANNDQTKQQPHKSGGS-FPCKSCNRSFTTE 673 TPKK E KKR ES+ KT + DKKA TP QKT KKG + H+ATPHP+K KT NND++ + P + S PCKSC++SF +E Sbjct: 199 TPKKPEVGKKRAAESSVLKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPAK--GKTIVNNDKSVKSPKSAPKSGVPCKSCSKSFISE 286
BLAST of EY736125 vs. ExPASy Swiss-Prot
Match: HDT2_ARATH (Histone deacetylase HDT2 OS=Arabidopsis thaliana GN=HDT2 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.866e-11 Identity = 41/77 (53.25%), Postives = 48/77 (62.34%), Query Frame = 2 Query: 419 TPKKAES-SKKRPVESASKTYVPDKKAXFV-----TPQKTEEKKGVSHIATPHPSKKSAKTPANNDQTKQQPHKSGG 631 TPKK E +KKRP ES SKT V KKA TPQKTEEKK H ATPHP+KK K+P N +Q+ + +S G Sbjct: 199 TPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGKSPVNANQSPKSGGQSSG 275 The following BLAST results are available for this feature:
BLAST of EY736125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736125 ID=EY736125; Name=EY736125; organism=Citrus sinensis; type=EST; length=871bpback to top |