EY736122

Overview
NameEY736122
Unique NameEY736122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY736122 vs. ExPASy Swiss-Prot
Match: HAL3A_ARATH (Phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3A PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.847e-19
Identity = 41/54 (75.93%), Postives = 45/54 (83.33%), Query Frame = 1 
Query:  232 DWEAMQVNTGLRKPRILLAASGSVAAIKFGNLCHCFAEWAEVRAVGEKVLSTLH 393
            D + M+VNT  RKPR+LLAASGSVAAIKFGNLCHCF EWAEVRAV  K  S+LH
Sbjct:    7 DRQDMEVNTTPRKPRVLLAASGSVAAIKFGNLCHCFTEWAEVRAVVTK--SSLH 58

HSP 2 Score: 30.4166 bits (67), Expect = 4.847e-19
Identity = 11/20 (55.00%), Postives = 17/20 (85.00%), Query Frame = 2 
Query:  374 RSSLHFIDRAALPKDVIFYT 433
            +SSLHF+D+ +LP++V  YT
Sbjct:   54 KSSLHFLDKLSLPQEVTLYT 73

HSP 3 Score: 22.7126 bits (47), Expect = 4.847e-19
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 3 
Query:  435 DEDEWASGGEIG 470
            DEDEW+S  +IG
Sbjct:   74 DEDEWSSWNKIG 85
[Close]
BLAST of EY736122 vs. ExPASy Swiss-Prot
Match: HAL3B_ARATH (Probable phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3B PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.114e-16
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 1 
Query:  244 MQVNTGLRKPRILLAASGSVAAIKFGNLCHCFAEWAEVRAVGEK 375
            M+V+T  RKPRILLAASGSVA+IKF NLCHCF+EWAEV+AV  K
Sbjct:    3 MEVDTVTRKPRILLAASGSVASIKFSNLCHCFSEWAEVKAVASK 46

HSP 2 Score: 28.8758 bits (63), Expect = 1.114e-16
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 2 
Query:  368 ARRSSLHFIDRAALPKDVIFYT 433
            A +SSL+F+D+ +LP++V  YT
Sbjct:   44 ASKSSLNFVDKPSLPQNVTLYT 65

HSP 3 Score: 22.7126 bits (47), Expect = 1.114e-16
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 3 
Query:  435 DEDEWASGGEIG 470
            DEDEW+S  +IG
Sbjct:   66 DEDEWSSWNKIG 77
The following BLAST results are available for this feature:
BLAST of EY736122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
HAL3A_ARATH4.847e-1975.93Phosphopantothenoylcysteine decarboxylase OS=Arabi... [more]
HAL3B_ARATH1.114e-1677.27Probable phosphopantothenoylcysteine decarboxylase... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-C02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736122 ID=EY736122; Name=EY736122; organism=Citrus sinensis; type=EST; length=863bp
CACGCGTCCGGCTTTGTTTGTCAACGTCGCGGCTGCCGCTCTCTATTTAA
AACCCCCCTCGCACTCTCTCTACTCTCTAGGTCTAGGCTGCCTCCAAGCC
AGCGACCGTTAGTCGTCGGTTTCCACACTCCGACGCTGCGACGTCGATTG
TTGTCTCCCCTCCGCCACGCCACTCGTGGATTGCTGTTCTACCACCGCCG
GCCGCGGCTGATCTGATTCATCTCATCTCATGATTGGGAGGCGATGCAGG
TCAATACTGGTCTGAGGAAACCCCGTATTTTACTTGCTGCAAGTGGAAGT
GTAGCTGCAATAAAATTTGGGAATCTCTGTCATTGTTTTGCTGAGTGGGC
GGAAGTAAGAGCGGTGGGCGAGAAGGTCCTCTCTACACTTCATTGATAGA
GCAGCGCTTCCTAAGGATGTGATCTTTTACACGAGACGAGGATGAATGGG
CCAGCGGGGGGGAGATAGGTGGATAGCGTTCTTCGCATGGAGGCCGCGCA
GATGGAGTGAGAGGGGGGGGGGAGCTGCCGCTGTCTGCATGGACGCGTGG
CTAGACTGGTGTGTTGGATGAGGTTGAAAGGGGCGCGGCGCGGATGGTGG
GGGGGCGGCCGGGCCGGAGGTGGCGCAGCCGCGCGGCCCCGGGCGCGTGG
GGGGCGGTGGGGGGTGTGGGGTGCGAGGGGGGGGGCGGCGGAGGCGGGGA
GCGGGGTGGGAGTGGGCGCGGCGGCTCGGCGGCGGGCGTAATCTGCTCTG
TGTCGTTCATGTCTATGGTGATGTCTCGCGGCGCCAGTGCTGCTCTCGCT
CTCTTCCTCGCAGGTCCCCTCGTGATGAGGGCGGCTCCCGGGCGGGCAGA
TCCCAGTCCGGCT
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