EY736119

Overview
NameEY736119
Unique NameEY736119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12344 contig Csv1_Contig12344:1..896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY736119 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 3.234e-27
Identity = 44/125 (35.20%), Postives = 70/125 (56.00%), Query Frame = 3
Query:  243 TDSAEVDALNKLIDYWNLRS----KINLTTIDPCTRNASWASENA--NPRVACDCT---SNSCHITHLKIYALDIMGELPSELFMLRKLMDLNLGQNVXNGSIPAEIGQLSNMQYLSLXINNFTG 590
            T   E  ALN +   W +R+     I+         +AS    N   NP + CDC+   S  C IT++K+YA++++G +P +L+ L  L +LNLGQNV  GS+P  +G L+ M++++  IN  +G
Sbjct:   36 THPDEALALNSIFAAWRIRAPREWNISGELCSGAAIDASVLDSNPAYNPLIKCDCSFENSTICRITNIKVYAMEVVGSIPQQLWTLEYLTNLNLGQNVLTGSLPPALGNLTRMRWMTFGINALSG 160          

HSP 2 Score: 62.3882 bits (150), Expect = 3.234e-27
Identity = 34/74 (45.95%), Postives = 39/74 (52.70%), Query Frame = 2
Query:  671 PXSFGKLTSLQQLYIDSSGSDXDLFPKEFANLKSLRNLWASDNLFTGKNPEIFGTLTDLADLATQGTLLEGPFP 892
            P   G+ T LQQ+YIDSSG    L P  FANL  L   W +D   TG+ P+  G  T L  L   GT L GP P
Sbjct:  187 PDEIGRCTKLQQIYIDSSGLSGGL-PVSFANLVELEQAWIADMELTGQIPDFIGDWTKLTTLRILGTGLSGPIP 259          
BLAST of EY736119 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 5.029e-16
Identity = 47/125 (37.60%), Postives = 70/125 (56.00%), Query Frame = 3
Query:  243 TDSAEVDALNKLIDYWNLRS----KINLTTIDPCTRNASWASENA--NPRVACDCT---SNSCHITHLKIYALDIMGELPSELFMLRKLMDLNLGQNVXNGSIPAEIGQLSNMQYLSLXINNFTG 590
            T   E  ALN +   W +++     I+         +AS    N   NP + CDC+   S  C IT++K+YA+D++G +P EL+ L  L +LNLGQNV  GS+P  IG L+ MQ+++  IN  +G
Sbjct:   37 THPDEARALNSIFAAWKIQAPREWNISGELCSGAAIDASVLDSNPAYNPLIKCDCSFQNSTICRITNIKVYAIDVVGPIPPELWTLTYLTNLNLGQNVLTGSLPPAIGNLTRMQWMTFGINALSG 161          

HSP 2 Score: 21.557 bits (44), Expect = 5.029e-16
Identity = 9/28 (32.14%), Postives = 13/28 (46.43%), Query Frame = 1
Query:  589 GRVPTELGNLTKLISLXXXXXXXXGPLP 672
            G +P E+G  TKL  +        G +P
Sbjct:  185 GSIPDEIGRCTKLQQMYIDSSGLSGRIP 212          
BLAST of EY736119 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 2.554e-14
Identity = 25/83 (30.12%), Postives = 47/83 (56.63%), Query Frame = 3
Query:  351 ASENANPRVACDCTSNS---CHITHLKIYALDIMGELPSELFMLRKLMDLNLGQNVXNGSIPAEIGQLSNMQYLSLXINNFTG 590
            AS +    + CDCT N+   C +T++++ +  + G  P E   L +L +++L +N  NG+IP  + Q+  ++ LS+  N  +G
Sbjct:   70 ASNSPTSNITCDCTFNASSVCRVTNIQLKSFSLPGIFPPEFGNLTRLREIDLSRNFLNGTIPTTLSQIP-LEILSVIGNRLSG 151          

HSP 2 Score: 48.1358 bits (113), Expect = 2.554e-14
Identity = 26/74 (35.14%), Postives = 39/74 (52.70%), Query Frame = 2
Query:  671 PXSFGKLTSLQQLYIDSSGSDXDLFPKEFANLKSLRNLWASDNLFTGKNPEIFGTLTDLADLATQGTLLEGPFP 892
            P + G L SL++L + ++     + P+  +NLK+L       N  +GK P+  G  T L  L  QGT +EGP P
Sbjct:  178 PRNLGNLRSLKELLLSANNFTGQI-PESLSNLKNLTEFRIDGNSLSGKIPDFIGNWTLLERLDLQGTSMEGPIP 250          
BLAST of EY736119 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 52.7582 bits (125), Expect = 9.444e-14
Identity = 30/74 (40.54%), Postives = 40/74 (54.05%), Query Frame = 2
Query:  671 PXSFGKLTSLQQLYIDSSGSDXDLFPKEFANLKSLRNLWASDNLFTGKNPEIFGTLTDLADLATQGTLLEGPFP 892
            P + G L SL++L I SS +     P+  +NLK+L N     N  +GK P+  G  T L  L  QGT +EGP P
Sbjct:  176 PPNLGNLRSLKRLLI-SSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIPDFIGNWTRLVRLDLQGTSMEGPIP 248          

HSP 2 Score: 45.0542 bits (105), Expect = 9.444e-14
Identity = 23/86 (26.74%), Postives = 47/86 (54.65%), Query Frame = 3
Query:  342 ASWASENANPRVACDCTSNS---CHITHLKIYALDIMGELPSELFMLRKLMDLNLGQNVXNGSIPAEIGQLSNMQYLSLXINNFTG 590
            A   S+     + CDCT N+   C +T++++   ++ G +P E   L +L +++L  N  +G+IP  + Q+  ++ L++  N  +G
Sbjct:   65 AESTSKLPTSNITCDCTFNASSVCRVTNIQLRGFNLRGIIPPEFGNLTRLTEIDLVLNFLSGTIPTTLSQIP-LEILAVTGNRLSG 149          
BLAST of EY736119 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 49.2914 bits (116), Expect = 6.466e-11
Identity = 30/90 (33.33%), Postives = 44/90 (48.89%), Query Frame = 3
Query:  324 DPCTRNASWASENANPRVACDCTSNSCHITHLKIYALDIMGELPSELFMLRKLMDLNLGQNVXNGSIPAEIGQLSNMQYLSLXINNFTGS 593
            DPC  N  W      P    D +    H+  L++  +++ G+L  EL +L  L  LN   N   G IP E+G L+++ +L L  N  TGS
Sbjct:   57 DPCASN--WTGVICIP----DPSDGFLHVKELRLLNMNLTGQLAPELGLLSNLTILNFMWNDLTGQIPPELGNLTHLIFLLLSGNQLTGS 140          

HSP 2 Score: 38.891 bits (89), Expect = 6.466e-11
Identity = 24/74 (32.43%), Postives = 35/74 (47.30%), Query Frame = 2
Query:  671 PXSFGKLTSLQQLYIDSSGSDXDLFPKEFANLKSLRNLWASDNLFTGKNPEIFGTLTDLADLATQGTLLEGPFP 892
            P   G L++L  L ID +     L P   ANLK L++   ++N  TG+ P  + TLT++         L G  P
Sbjct:  142 PQELGSLSNLLILQIDYNEISGKL-PTSLANLKKLKHFHMNNNSITGQIPPEYSTLTNVLHFLMDNNKLTGNLP 214          
BLAST of EY736119 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 44.2838 bits (103), Expect = 8.371e-11
Identity = 28/74 (37.84%), Postives = 34/74 (45.95%), Query Frame = 2
Query:  671 PXSFGKLTSLQQLYIDSSGSDXDLFPKEFANLKSLRNLWASDNLFTGKNPEIFGTLTDLADLATQGTLLEGPFP 892
            P SFG LT L  LY+  +     + P E  NL +LR L    N  TGK P  FG L ++  L      L G  P
Sbjct:  207 PSSFGNLTKLVNLYLFINSLSGSI-PSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKNVTLLNMFENQLSGEIP 279          

HSP 2 Score: 43.5134 bits (101), Expect = 8.371e-11
Identity = 22/51 (43.14%), Postives = 34/51 (66.67%), Query Frame = 3
Query:  438 IMGELPSELFMLRKLMDLNLGQNVXNGSIPAEIGQLSNMQYLSLXINNFTG 590
            ++GE+P EL  L  L  L+L +N  NGSIP+EIG+L+ +  +++  N  TG
Sbjct:  154 LVGEIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLTG 204          
The following BLAST results are available for this feature:
BLAST of EY736119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
Y5614_ARATH3.234e-2735.20Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH5.029e-1637.60Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH2.554e-1430.12Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH9.444e-1440.54Probable LRR receptor-like serine/threonine-protei... [more]
Y5374_ARATH6.466e-1133.33Probable LRR receptor-like serine/threonine-protei... [more]
Y4885_ARATH8.371e-1137.84Probable LRR receptor-like serine/threonine-protei... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-B11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736119 ID=EY736119; Name=EY736119; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGAAATTTTATCTTATGGATTTGTTTTCTTGTTGTTCTTACG
TTAGCCAAGAATCTTTATATTTGGGTTTAATCTTATTATTCTAAATATTT
TAGCCCGCCTATTTCTTCCCTCTTACTCGTGTCTGATCAATTGTCTTTTG
CAGCCGCATGCACAACAATGGAACTCTTAAGGCCCTCTTTGCTGCTAACT
GTATCACTATCTCTGCTTCAGCTTGTTTCTGCACAAACAAGCACTGACTC
AGCTGAAGTGGATGCCCTTAACAAGCTGATCGATTACTGGAACTTAAGAA
GCAAAATCAATCTTACTACAATTGACCCTTGTACACGGAATGCCTCATGG
GCATCTGAAAATGCGAATCCTCGTGTTGCTTGTGACTGCACCAGCAATTC
CTGCCACATCACTCACTTAAAGATTTATGCTTTGGACATCATGGGCGAGT
TACCAAGCGAGCTTTTTATGCTAAGGAAGCTAATGGACTTGAATCTGGGT
CAAAACGTANCTAATGGAAGCATTCCAGCTGAAATTGGGCAGCTATCAAA
TATGCAATATCTTAGCCTGNGCATAAACAATTTCACTGGGTCGAGTGCCT
ACAGAACTCGGAAATCTAACCAAGTTGATTAGCCTAAGCTTTAGCTCAAA
CAATTTCTTTGGACCATTGCCCANGGAGCTTTGGAAAGTTAACATCCTTG
CAGCAGCTGTATATCGATAGCAGTGGGAGTGACNAGGATCTATTCCCCAA
GGAATTTGCAAATCTGAAATCCCTACGAAATCTCTGGGCATCGGATAATC
TCTTCACTGGCAAGAATCCAGAAATTTTTGGAACGCTTACAGACCTGGCT
GATCTGGCGACTCAAGGGACGTTGCTTGAAGGTCCATTCCCAGAAGTTTC
G
back to top