EY736110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736110 vs. ExPASy Swiss-Prot
Match: C3H67_ARATH (Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13 Identity = 30/46 (65.22%), Postives = 40/46 (86.96%), Query Frame = 3 Query: 381 GNQMRKRYPYPVRPDAQDCTFYMKTGTCKFGSNCKFNHPVRRKNQV 518 G++ R YPVRPD++DC+FYM+TG+CK+GS+CKFNHPVRRK Q+ Sbjct: 89 GSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQI 134
BLAST of EY736110 vs. ExPASy Swiss-Prot
Match: C3H63_ORYSJ (Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2) HSP 1 Score: 54.6842 bits (130), Expect = 4.597e-12 Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 3 Query: 408 YPVRPDAQDCTFYMKTGTCKFGSNCKFNHPVRR 506 +P RPD +C FYMKTG CKFG+ CKF+HP R Sbjct: 306 FPERPDQPECQFYMKTGDCKFGAVCKFHHPKER 338 HSP 2 Score: 37.3502 bits (85), Expect = 4.597e-12 Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 2 Query: 614 QYHHPKNRIPKSPPCTLXRQGLPLRP 691 ++HHPK RI +P C L GLPLRP Sbjct: 331 KFHHPKERIIPTPNCALSSLGLPLRP 356
BLAST of EY736110 vs. ExPASy Swiss-Prot
Match: C3H66_ORYSJ (Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 5.964e-12 Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 3 Query: 408 YPVRPDAQDCTFYMKTGTCKFGSNCKFNHPVRR 506 +P RPD +C FYMKTG CKFG+ CKF+HP R Sbjct: 315 FPERPDQPECQFYMKTGDCKFGAVCKFHHPKER 347 HSP 2 Score: 36.965 bits (84), Expect = 5.964e-12 Identity = 14/26 (53.85%), Postives = 18/26 (69.23%), Query Frame = 2 Query: 614 QYHHPKNRIPKSPPCTLXRQGLPLRP 691 ++HHPK R+ +P C L GLPLRP Sbjct: 340 KFHHPKERLVPAPNCALNSLGLPLRP 365
BLAST of EY736110 vs. ExPASy Swiss-Prot
Match: C3H43_ARATH (Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g48440 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11 Identity = 27/39 (69.23%), Postives = 35/39 (89.74%), Query Frame = 3 Query: 408 YPVRPDAQDCTFYMKTGTCKFGSNCKFNHPVRRKNQVIK 524 YPVRP A+DC+FYM+TG+CKFGS+CKFNHP+ RK Q+ + Sbjct: 107 YPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIAR 145
BLAST of EY736110 vs. ExPASy Swiss-Prot
Match: C3H13_ARATH (Zinc finger CCCH domain-containing protein 13 OS=Arabidopsis thaliana GN=At1g48195 PE=4 SV=1) HSP 1 Score: 46.595 bits (109), Expect = 4.110e-11 Identity = 19/30 (63.33%), Postives = 21/30 (70.00%), Query Frame = 2 Query: 602 KSNWQYHHPKNRIPKSPPCTLXRQGLPLRP 691 K N +YHHPKN P P CTL +GLPLRP Sbjct: 27 KQNCKYHHPKNITPSEPQCTLNDKGLPLRP 56 HSP 2 Score: 42.3578 bits (98), Expect = 4.110e-11 Identity = 13/30 (43.33%), Postives = 21/30 (70.00%), Query Frame = 3 Query: 408 YPVRPDAQDCTFYMKTGTCKFGSNCKFNHP 497 +P RP +C++Y++TG C NCK++HP Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHP 35 The following BLAST results are available for this feature:
BLAST of EY736110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736110 ID=EY736110; Name=EY736110; organism=Citrus sinensis; type=EST; length=898bpback to top |