EY736105

Overview
NameEY736105
Unique NameEY736105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY736105_ssr247 microsatellite EY736105_ssr247:247..261. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9675 contig Csv1_Contig9675:12..818. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY736105 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.836e-50
Identity = 111/176 (63.07%), Postives = 130/176 (73.86%), Query Frame = 3
Query:  156 RSGANQLSSVK--YLPSLRRNVNLSVRCTAXXXXXXXXXXXX-PTIPKAE---PQPP--KKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESXSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTL 659
            RS  NQ +++   Y+P+LRRNV+L VR  A             PT P A    PQP   + P+MST FS++ AFSGPAPERINGRLAMIGFVAA+GVEI+KGQ +  QLS GGVAWFLGTSVLL++ASL+P F+GVSVES S   M+SDAE WNGR AMLGLVALAFTEFVKG +L
Sbjct:   20 RSRVNQFTNIPSVYIPTLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSL 195          
BLAST of EY736105 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.574e-36
Identity = 90/197 (45.69%), Postives = 124/197 (62.94%), Query Frame = 3
Query:   87 MAASLATQSMLASPVAARVTGIRRSGANQLSSVKY---LPSLRRNVNLSVRCTAXXXXXXXXXXXXP--TIPKAEPQPPKKPRMSTGFS-EVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESXSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTL 659
            MA+S    ++ A     + T I R G N L   K    LP +RRN   +VR                  T        P +  ++T  + ++F+F G APERINGR AMIGFVAA+GVE++ G+DVF+Q+ +GGV WFL TS +L +A+L+P+++G+S E+ ++GF  SDAE+WNGRFAM+GLVALAFTE+VKGG L
Sbjct:    1 MASSTCYATIPAMSCRGQST-ITRFGPNNLFLGKQSYELPLMRRNAKFTVRSMREDNEKEEQQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPL 196          
BLAST of EY736105 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.119e-31
Identity = 86/185 (46.49%), Postives = 109/185 (58.92%), Query Frame = 3
Query:   99 LATQSMLASPVAARVTGIRRSGANQLSSVKYLPSLRRNVNLSVRCTAXXXXXXXXXXXXPTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDG-GVAWFLGTSVLLTVASLVPLFKGVSVESXSDGFMTSDAELWNGRFAMLGLVALAFTEFVKG 650
            +AT   ++S   A V  + RS A+   + + LP+L R   L VR               P+ P     PP KP+ ST   +  AFSGPAPERINGRLAM+GFV AL VE  +G  + +QL  G G AWF  T  +L++ASLVPL +G S E  +   M ++AELWNGRFAMLGLVALA TE + G
Sbjct:    1 MATMMSMSSFAGAAV--VPRSSASSFGA-RSLPALGRRA-LVVRAQTEG----------PSAP-----PPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITG 166          
BLAST of EY736105 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.119e-31
Identity = 73/127 (57.48%), Postives = 91/127 (71.65%), Query Frame = 3
Query:  276 PTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLS--DGGVAWFLGTSVLLTVASLVPLFKGVSVESXSDGFMTSDAELWNGRFAMLGLVALAFTEFVKG 650
            PT   A P+P  K + +    +  AFSGPAPERINGRLAM+GFVAAL VE ++G  +  Q+     G+AWFL T+ + +VASL+PL +G SVES S G  ++DAELWNGRFAMLGLVALA TEF+ G
Sbjct:  100 PTTIPAAPKPVTK-KANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITG 225          
BLAST of EY736105 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.461e-31
Identity = 68/117 (58.12%), Postives = 83/117 (70.94%), Query Frame = 3
Query:  303 PPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDG-GVAWFLGTSVLLTVASLVPLFKGVSVESXSDGFMTSDAELWNGRFAMLGLVALAFTEFVKG 650
            PP KP+ ST   +  AFSGPAPERINGRLAM+GFV AL VE  +G  + +QL  G G AWF  T  +L++ASLVPL +G S E  +   M ++AELWNGRFAM+GLVALA TE + G
Sbjct:   45 PPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITG 161          
BLAST of EY736105 vs. ExPASy Swiss-Prot
Match: CBR_DUNBA (Carotene biosynthesis-related protein CBR, chloroplastic OS=Dunaliella bardawil GN=CBR PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.161e-18
Identity = 59/126 (46.83%), Postives = 73/126 (57.94%), Query Frame = 3
Query:  279 TIPKAEPQPPKKPRMSTG--FSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESXSDGFMTSDAELWNGRFAMLGLVALAFTEFVKG 650
            T P + P PP  P        +EV  FSG APE INGRLAM+GFVAALG E+S G+ V  QL D      L T VL + ASL+P F     +  + G  T DAE+ NGRFAM+G  A+   E ++G
Sbjct:   47 TPPPSSPSPPPPPPTPAAPTVTEVMGFSG-APEIINGRLAMLGFVAALGAELSTGESVLTQLGDQPTLIAL-TFVLFSAASLIPAF--ARRKGDAMGPFTPDAEMTNGRFAMIGFAAMLVYEGIQG 168          
The following BLAST results are available for this feature:
BLAST of EY736105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ELI_PEA1.836e-5063.07Early light-induced protein, chloroplastic OS=Pisu... [more]
DS22_CRAPL2.574e-3645.69Desiccation stress protein DSP-22, chloroplastic O... [more]
ELI9_HORVU1.119e-3146.49Low molecular mass early light-inducible protein H... [more]
ELI5_HORVU1.119e-3157.48High molecular mass early light-inducible protein ... [more]
ELI6_HORVU1.461e-3158.12Low molecular mass early light-inducible protein H... [more]
CBR_DUNBA3.161e-1846.83Carotene biosynthesis-related protein CBR, chlorop... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-A06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736105 ID=EY736105; Name=EY736105; organism=Citrus sinensis; type=EST; length=816bp
CACGCGTCCGCGGACGCGTGGGGCCGACCTGAAGCACCCAATTCCCGAAT
TATACTTTGTTCTGTTTTCTACTTCATAAATTAAAAATGGCCGCATCACT
TGCTACTCAATCTATGCTGGCAAGTCCTGTAGCAGCTCGTGTGACTGGTA
TCAGGAGATCCGGGGCAAACCAACTTTCCTCCGTCAAGTACTTGCCTAGT
CTGCGTAGAAATGTCAACTTATCCGTGCGCTGCACGGCAGAGGATGAGCA
GCAGCAGCAGCAGAAAGATGATCAACCAACCATACCGAAAGCTGAGCCTC
AGCCACCAAAGAAGCCGCGGATGAGCACGGGGTTCTCTGAGGTGTTTGCG
TTCAGCGGGCCGGCACCGGAGAGGATAAACGGGAGGCTTGCGATGATTGG
GTTCGTGGCTGCATTGGGGGTGGAGATATCCAAGGGTCAGGATGTGTTTG
CCCAGTTATCAGACGGTGGGGTTGCCTGGTTCTTGGGGACCAGTGTTTTG
CTCACGGTTGCGTCCCTGGTTCCTTTGTTTAAAGGTGTCAGCGTGGAGTC
TANATCGGATGGGTTCATGACTTCGGATGCTGAGTTGTGGAATGGGAGGT
TTGCTATGCTGGGCCTTGTTGCTTTGGCTTTCACCGAGTTTGTTAAGGGT
GGCACCCTTGGTTAAGCTTAAATTTGTTGAAATCTGTAGATCTGGATTTT
TTTTACCTAATGTATGTATGAGAATCCTACGTTATGAAAATCTCTAATTC
TCATGCCAGTCTGTAATGCAGGCACCAGTGTCTAAGAAAAAAAAAGAAAA
AGAGGGGGGCCGCTCG
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