EY736091

Overview
NameEY736091
Unique NameEY736091
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length528
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3650 contig Csv1_Contig3650:1..518. BLAST: Citrus Unigene V1 Contigs to Populus V2 proteins
Homology
BLAST of EY736091 vs. ExPASy Swiss-Prot
Match: AB10I_ARATH (ABC transporter I family member 10, chloroplastic OS=Arabidopsis thaliana GN=ABCI10 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.935e-41
Identity = 89/156 (57.05%), Postives = 117/156 (75.00%), Query Frame = 2
Query:    2 LKVLAGLLKPTNGHVYVKRPKSFVFQNPDHQVVMPTVEADVAFGLGNL-NLTHDEVRSKVAKALDAVGMSNYLQRPVXTLSGGQKQRVAIAGALXEACKGVATGMSSQHFWMKVISWGVIEAGKKFVGVILGEVTAFVGLPIGLEELEYADGCFYM 466
            LK+LAG++ P++G V+V++PK+FVFQNPDHQVVMPTVEADVAFGLG   ++  +EV+S+V KAL+AVGM +Y+QRP+ TLSGGQKQR+AIAGAL EACK +     +  F  +    GVI+A K  +    G+VTA + +   LEEL+YADG  YM
Sbjct:   87 LKILAGVVNPSSGTVFVEKPKNFVFQNPDHQVVMPTVEADVAFGLGKYHDMNQEEVKSRVIKALEAVGMRDYMQRPIQTLSGGQKQRIAIAGALAEACKVLLLDELTT-FLDESDQMGVIKAVKDLINAKKGDVTA-LWVTHRLEELKYADGAVYM 240          

HSP 2 Score: 24.6386 bits (52), Expect = 9.935e-41
Identity = 10/25 (40.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:  453 GAFTWEDGKIVMQADGVSILNFIKS 527
            GA   E+G++V   D  +I +FIK+
Sbjct:  236 GAVYMENGRVVRHGDAATISDFIKA 260          
BLAST of EY736091 vs. ExPASy Swiss-Prot
Match: CBIO1_STRPB (Cobalt import ATP-binding protein cbiO 1 OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=cbiO1 PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 4.411e-17
Identity = 47/106 (44.34%), Postives = 66/106 (62.26%), Query Frame = 2
Query:    2 LKVLAGLLKPTNGHVYV-------------KRPKSFVFQNPDHQVVMPTVEADVAFGLGNLNLTHDEVRSKVAKALDAVGMSNYLQRPVXTLSGGQKQRVAIAGAL 280
            ++++ GLL+P +G V V             +     VFQNPD+Q V  TVE DVAFGL N  + H++++ +V  AL+ VGM N+ ++    LSGGQKQRVAIAGA+
Sbjct:   50 IRLIDGLLEPESGSVIVDGDLLTITNVWEIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIAHEDIKERVNHALELVGMQNFKEKEPARLSGGQKQRVAIAGAV 155          
BLAST of EY736091 vs. ExPASy Swiss-Prot
Match: CBIO_STRPY (Cobalt import ATP-binding protein cbiO OS=Streptococcus pyogenes GN=cbiO PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.760e-17
Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = 2
Query:    2 LKVLAGLLKPTNGHVYV-------------KRPKSFVFQNPDHQVVMPTVEADVAFGLGNLNLTHDEVRSKVAKALDAVGMSNYLQRPVXTLSGGQKQRVAIAGAL 280
            ++++ GLL+P +G + V             +     VFQNPD+Q V  TVE DVAFGL N  + H++++ +V  AL+ VGM N+ ++    LSGGQKQRVAIAGA+
Sbjct:   50 IRLIDGLLEPESGSIIVDGDLLTITNVWEIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIAHEDIKERVNHALELVGMQNFKEKEPARLSGGQKQRVAIAGAV 155          
BLAST of EY736091 vs. ExPASy Swiss-Prot
Match: CBIO2_STRPG (Cobalt import ATP-binding protein cbiO 2 OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=cbiO2 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.760e-17
Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = 2
Query:    2 LKVLAGLLKPTNGHVYV-------------KRPKSFVFQNPDHQVVMPTVEADVAFGLGNLNLTHDEVRSKVAKALDAVGMSNYLQRPVXTLSGGQKQRVAIAGAL 280
            ++++ GLL+P +G + V             +     VFQNPD+Q V  TVE DVAFGL N  + H++++ +V  AL+ VGM N+ ++    LSGGQKQRVAIAGA+
Sbjct:   50 IRLIDGLLEPESGSIIVDGDLLTITNVWEIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIAHEDIKERVNHALELVGMQNFKEKEPARLSGGQKQRVAIAGAV 155          
BLAST of EY736091 vs. ExPASy Swiss-Prot
Match: CBIO2_STRP8 (Cobalt import ATP-binding protein cbiO 2 OS=Streptococcus pyogenes serotype M18 GN=cbiO2 PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 5.760e-17
Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = 2
Query:    2 LKVLAGLLKPTNGHVYV-------------KRPKSFVFQNPDHQVVMPTVEADVAFGLGNLNLTHDEVRSKVAKALDAVGMSNYLQRPVXTLSGGQKQRVAIAGAL 280
            ++++ GLL+P +G + V             +     VFQNPD+Q V  TVE DVAFGL N  + H++++ +V  AL+ VGM N+ ++    LSGGQKQRVAIAGA+
Sbjct:   50 IRLIDGLLEPESGSIIVDGDLLTITNVWEIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIAHEDIKERVNHALELVGMQNFKEKEPARLSGGQKQRVAIAGAV 155          
BLAST of EY736091 vs. ExPASy Swiss-Prot
Match: CBIO2_STRP6 (Cobalt import ATP-binding protein cbiO 2 OS=Streptococcus pyogenes serotype M6 GN=cbiO2 PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 5.760e-17
Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = 2
Query:    2 LKVLAGLLKPTNGHVYV-------------KRPKSFVFQNPDHQVVMPTVEADVAFGLGNLNLTHDEVRSKVAKALDAVGMSNYLQRPVXTLSGGQKQRVAIAGAL 280
            ++++ GLL+P +G + V             +     VFQNPD+Q V  TVE DVAFGL N  + H++++ +V  AL+ VGM N+ ++    LSGGQKQRVAIAGA+
Sbjct:   50 IRLIDGLLEPESGSIIVDGDLLTITNVWEIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIAHEDIKERVNHALELVGMQNFKEKEPARLSGGQKQRVAIAGAV 155          
BLAST of EY736091 vs. ExPASy Swiss-Prot
Match: CBIO2_STRP3 (Cobalt import ATP-binding protein cbiO 2 OS=Streptococcus pyogenes serotype M3 GN=cbiO2 PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 5.760e-17
Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = 2
Query:    2 LKVLAGLLKPTNGHVYV-------------KRPKSFVFQNPDHQVVMPTVEADVAFGLGNLNLTHDEVRSKVAKALDAVGMSNYLQRPVXTLSGGQKQRVAIAGAL 280
            ++++ GLL+P +G + V             +     VFQNPD+Q V  TVE DVAFGL N  + H++++ +V  AL+ VGM N+ ++    LSGGQKQRVAIAGA+
Sbjct:   50 IRLIDGLLEPESGSIIVDGDLLTITNVWEIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIAHEDIKERVNHALELVGMQNFKEKEPARLSGGQKQRVAIAGAV 155          
BLAST of EY736091 vs. ExPASy Swiss-Prot
Match: CBIO2_STRP1 (Cobalt import ATP-binding protein cbiO 2 OS=Streptococcus pyogenes serotype M1 GN=cbiO2 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.760e-17
Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = 2
Query:    2 LKVLAGLLKPTNGHVYV-------------KRPKSFVFQNPDHQVVMPTVEADVAFGLGNLNLTHDEVRSKVAKALDAVGMSNYLQRPVXTLSGGQKQRVAIAGAL 280
            ++++ GLL+P +G + V             +     VFQNPD+Q V  TVE DVAFGL N  + H++++ +V  AL+ VGM N+ ++    LSGGQKQRVAIAGA+
Sbjct:   50 IRLIDGLLEPESGSIIVDGDLLTITNVWEIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIAHEDIKERVNHALELVGMQNFKEKEPARLSGGQKQRVAIAGAV 155          
BLAST of EY736091 vs. ExPASy Swiss-Prot
Match: CBIO1_STRPM (Cobalt import ATP-binding protein cbiO 1 OS=Streptococcus pyogenes serotype M28 GN=cbiO1 PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 5.760e-17
Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = 2
Query:    2 LKVLAGLLKPTNGHVYV-------------KRPKSFVFQNPDHQVVMPTVEADVAFGLGNLNLTHDEVRSKVAKALDAVGMSNYLQRPVXTLSGGQKQRVAIAGAL 280
            ++++ GLL+P +G + V             +     VFQNPD+Q V  TVE DVAFGL N  + H++++ +V  AL+ VGM N+ ++    LSGGQKQRVAIAGA+
Sbjct:   50 IRLIDGLLEPESGSIIVDGDLLTITNVWEIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIAHEDIKERVNHALELVGMQNFKEKEPARLSGGQKQRVAIAGAV 155          
BLAST of EY736091 vs. ExPASy Swiss-Prot
Match: CBIO1_STRPF (Cobalt import ATP-binding protein cbiO 1 OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=cbiO1 PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 5.760e-17
Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = 2
Query:    2 LKVLAGLLKPTNGHVYV-------------KRPKSFVFQNPDHQVVMPTVEADVAFGLGNLNLTHDEVRSKVAKALDAVGMSNYLQRPVXTLSGGQKQRVAIAGAL 280
            ++++ GLL+P +G + V             +     VFQNPD+Q V  TVE DVAFGL N  + H++++ +V  AL+ VGM N+ ++    LSGGQKQRVAIAGA+
Sbjct:   50 IRLIDGLLEPESGSIIVDGDLLTITNVWEIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIAHEDIKERVNHALELVGMQNFKEKEPARLSGGQKQRVAIAGAV 155          
The following BLAST results are available for this feature:
BLAST of EY736091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
AB10I_ARATH9.935e-4157.05ABC transporter I family member 10, chloroplastic ... [more]
CBIO1_STRPB4.411e-1744.34Cobalt import ATP-binding protein cbiO 1 OS=Strept... [more]
CBIO_STRPY5.760e-1743.40Cobalt import ATP-binding protein cbiO OS=Streptoc... [more]
CBIO2_STRPG5.760e-1743.40Cobalt import ATP-binding protein cbiO 2 OS=Strept... [more]
CBIO2_STRP85.760e-1743.40Cobalt import ATP-binding protein cbiO 2 OS=Strept... [more]
CBIO2_STRP65.760e-1743.40Cobalt import ATP-binding protein cbiO 2 OS=Strept... [more]
CBIO2_STRP35.760e-1743.40Cobalt import ATP-binding protein cbiO 2 OS=Strept... [more]
CBIO2_STRP15.760e-1743.40Cobalt import ATP-binding protein cbiO 2 OS=Strept... [more]
CBIO1_STRPM5.760e-1743.40Cobalt import ATP-binding protein cbiO 1 OS=Strept... [more]
CBIO1_STRPF5.760e-1743.40Cobalt import ATP-binding protein cbiO 1 OS=Strept... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-009-H04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736091 ID=EY736091; Name=EY736091; organism=Citrus sinensis; type=EST; length=528bp
TTTGAAGGTCTTGGCAGGTCTTTTGAAACCAACAAATGGGCATGTGTATG
TCAAAAGGCCTAAGAGTTTTGTTTTCCAAAATCCTGACCATCAGGTAGTG
ATGCCTACGGTAGAAGCTGATGTGGCATTTGGCCTAGGTAATCTGAATCT
GACTCATGATGAAGTCAGATCCAAGGTGGCAAAAGCATTGGATGCTGTTG
GCATGTCTAACTACTTGCAGAGACCAGTTCANACTCTCAGTGGCGGTCAG
AAACAAAGGGTTGCAATTGCTGGTGCTTTANCTGAAGCATGTAAGGGTGT
TGCTACTGGGATGAGCTCACAACATTTCTGGATGAAAGTGATCAGTTGGG
GGGTGATTGAAGCGGGTAAAAAATTTGTTGGGGTGATTCTGGGAGAAGTT
ACAGCCTTTGTGGGGTTACCCATCGGGTTAGAAGAGCTCGAGTATGCTGA
TGGGTGCTTTTACATGGGAAGATGGAAAGATTGTTATGCAAGCGGATGGA
GTAAGCATATTAAATTTCATTAAAAGTC
back to top