EY736055

Overview
NameEY736055
Unique NameEY736055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3176 contig Csv1_Contig3176:462..1047. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY736055 vs. ExPASy Swiss-Prot
Match: PUR_ARATH (Transcription factor Pur-alpha 1 OS=Arabidopsis thaliana GN=PURA1 PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 3.362e-30
Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 1 
Query:    4 RVRKGDQS*SEEIFFDLGSNNRGHFLRISEVAGSDRSSIILPLSGLKQFHEIVGHFVEITKDRIEGMTGASVRIVDPPQR 243
            +V + DQ   +  FFDLG+NNRGHFLRISEVAGSDRSSIILPLSGLKQFHE++GHFVEITKD+IEGMTGA+VR VDPPQR
Sbjct:  220 KVIRADQ---KRFFFDLGNNNRGHFLRISEVAGSDRSSIILPLSGLKQFHEVIGHFVEITKDKIEGMTGANVRTVDPPQR 296
The following BLAST results are available for this feature:
BLAST of EY736055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PUR_ARATH3.362e-3080.00Transcription factor Pur-alpha 1 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-009-D11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736055 ID=EY736055; Name=EY736055; organism=Citrus sinensis; type=EST; length=585bp
CCACGCGTCCGCAAAGGTGATCAGAGCTGATCAGAAGAGATCTTCTTTGA
TCTTGGGAGCAACAACAGAGGTCATTTCCTGAGGATATCTGAGGTAGCGG
GCTCTGATCGTTCCTCCATCATACTCCCACTGTCTGGACTGAAGCAGTTT
CATGAAATAGTGGGACACTTTGTGGAGATCACCAAAGATCGAATTGAAGG
AATGACTGGTGCAAGTGTTCGGATAGTGGATCCCCCTCAAAGATGAAGTT
AGTTGATTCAGGTGTTTGGTGAAACAAATAATTGGCAATGCAAGGTTGTT
ACAGATTGGTGTTTGATTAGGGCTGTTGATTGTGTTAGTTGTGCTCTGCT
ATGTCCCTCTCCGTCCGTTCTCACATTCAAGTAAAATAATCCGATGTATC
TGTTTGGTTAGCAGAGAAATTTCGGAAATATTTGCCAAGCATAATTTCGG
ATAGATAATAACAAGAACAAGAAAAGGCCAGATATTTGTAATTGTTAGTT
TGATAGTGTGGCAGCGAAGTTACGGTTTTAATAATACTCATCGAAATGTG
TNTTGCTTANNAAAAAAAAAAAAAAANAAAAANAA
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