EY736017

Overview
NameEY736017
Unique NameEY736017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736017 vs. ExPASy Swiss-Prot
Match: CHLG_ARATH (Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 3.529e-65
Identity = 106/131 (80.92%), Postives = 116/131 (88.55%), Query Frame = 2
Query:   86 TPSRRLTVRAQEPNANEVKPQATDKAPAASGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLIWGIVCGAAASGNFHWNVEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDASNEPYRPIPSGAIS 478
            +P RR  VRA E + ++VK Q  DKAPA  GSS NQLLGIKGA+QETNKWKIRLQLTKPVTWPPL+WG+VCGAAASGNFHW  EDVAKSI+CM+MSGPCLTGYTQTINDWYDR+IDA NEPYRPIPSGAIS
Sbjct:   49 SPGRRFVVRAAETDTDKVKSQTPDKAPAG-GSSINQLLGIKGASQETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWTPEDVAKSILCMMMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAIS 178          

HSP 2 Score: 42.743 bits (99), Expect = 3.529e-65
Identity = 18/28 (64.29%), Postives = 21/28 (75.00%), Query Frame = 1
Query:  523 GLGLPGLLDVWAGHDFPTIFRLACGSIL 606
            GLG+ G+LDVWAGH  PT+F LA G  L
Sbjct:  193 GLGIAGILDVWAGHTTPTVFYLALGGSL 220          
BLAST of EY736017 vs. ExPASy Swiss-Prot
Match: CHLG_ORYSJ (Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLG PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.772e-63
Identity = 102/124 (82.26%), Postives = 109/124 (87.90%), Query Frame = 2
Query:  107 VRAQEPNANEVKPQATDKAPAASGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLIWGIVCGAAASGNFHWNVEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDASNEPYRPIPSGAIS 478
            VRA E +  E K  A +KAPA  GSSFNQLLGIKGA QE + WKIRLQLTKPVTWPPL+WG++CGAAASGNFHW VEDVAKSIVCMIMSGPCLTGYTQTINDWYDR+IDA NEPYRPIPSGAIS
Sbjct:   46 VRAAETD-KETKANAPEKAPAG-GSSFNQLLGIKGAKQENDIWKIRLQLTKPVTWPPLVWGVLCGAAASGNFHWTVEDVAKSIVCMIMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAIS 167          

HSP 2 Score: 46.9802 bits (110), Expect = 1.772e-63
Identity = 22/29 (75.86%), Postives = 22/29 (75.86%), Query Frame = 1
Query:  520 AGLGLPGLLDVWAGHDFPTIFRLACGSIL 606
            AGLGL  LLDVWAGHDFP IF LA G  L
Sbjct:  181 AGLGLGALLDVWAGHDFPIIFYLAVGGSL 209          

HSP 3 Score: 26.9498 bits (58), Expect = 1.772e-63
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 3
Query:  480 DNEVITQIWVLLL 518
            +NEVITQIW LLL
Sbjct:  168 ENEVITQIWALLL 180          
BLAST of EY736017 vs. ExPASy Swiss-Prot
Match: CHLG_AVESA (Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 7.764e-62
Identity = 103/126 (81.75%), Postives = 110/126 (87.30%), Query Frame = 2
Query:  107 VRAQEPNANEV--KPQATDKAPAASGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLIWGIVCGAAASGNFHWNVEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDASNEPYRPIPSGAIS 478
            V A + +A E   KP   DKAPAA GSSFNQLLGIKGA QETN WKIRLQLTKPVTWPPL+WG++CGAAASGNFHW VEDV KSIVCM+MSGPCLTGYTQTINDWYDR+IDA NEPYRPIPSGAIS
Sbjct:   45 VCAADADAKETTKKPTIPDKAPAA-GSSFNQLLGIKGAKQETNIWKIRLQLTKPVTWPPLVWGVLCGAAASGNFHWTVEDVTKSIVCMLMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAIS 169          

HSP 2 Score: 45.0542 bits (105), Expect = 7.764e-62
Identity = 20/28 (71.43%), Postives = 21/28 (75.00%), Query Frame = 1
Query:  523 GLGLPGLLDVWAGHDFPTIFRLACGSIL 606
            GLGL  LLD+WAGHDFP IF LA G  L
Sbjct:  184 GLGLGALLDIWAGHDFPIIFYLALGGSL 211          
BLAST of EY736017 vs. ExPASy Swiss-Prot
Match: BCHG_CHLAA (Bacteriochlorophyll synthase 34 kDa chain OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=bchG PE=4 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.108e-17
Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 2
Query:  218 QETNKWKIR-LQLTKPVTWPPLIWGIVCGAAASGNFHWNVEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDASNEPYRPIPSGAIS 478
            Q    W +R +QL KPVTW    W  +CGA ASG   WN E + + ++ M M+GP L G +Q +ND+ DRE+DA NEP+R IPSG +S
Sbjct:   23 QSRYAWLVRSIQLMKPVTWFAPTWAFMCGAIASGALGWN-ESIGRLLLGMFMAGPILCGLSQVVNDYADREVDAINEPHRLIPSGQVS 109          
BLAST of EY736017 vs. ExPASy Swiss-Prot
Match: BCHG_RHOCA (Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus GN=bchG PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.463e-14
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 2
Query:  245 LQLTKPVTWPPLIWGIVCGAAASGNFHWNVEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDASNEPYRPIPSGAI 475
            L+L KPVTW P +W  +CGA +S    W  + V   ++ ++++GP + G +Q  NDW DR +DA NEP+RPIPSG I
Sbjct:   20 LELIKPVTWFPPMWAYLCGAVSSNVPIWENKGVV--VLGIVLAGPIVCGMSQAANDWCDRHVDAINEPHRPIPSGRI 94          
BLAST of EY736017 vs. ExPASy Swiss-Prot
Match: BCHG_RHOS4 (Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=bchG PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.035e-12
Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 2
Query:  245 LQLTKPVTWPPLIWGIVCGAAASGNFHWNVEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDASNEPYRPIPSGAIS*Q*GHY 496
            L+L +P+TW P IW  +CG  + G   W  E     ++ M+++GP + G +Q  N+W DR +DA NEP RPIPSG I  + G Y
Sbjct:   19 LELIQPITWFPPIWAYLCGTVSVGI--WPGEKWPLVLLGMVLAGPLVCGMSQAANNWCDRHVDAVNEPDRPIPSGRIPGRWGLY 100          
The following BLAST results are available for this feature:
BLAST of EY736017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CHLG_ARATH3.529e-6580.92Chlorophyll synthase, chloroplastic OS=Arabidopsis... [more]
CHLG_ORYSJ1.772e-6382.26Chlorophyll synthase, chloroplastic OS=Oryza sativ... [more]
CHLG_AVESA7.764e-6281.75Chlorophyll synthase, chloroplastic OS=Avena sativ... [more]
BCHG_CHLAA3.108e-1748.86Bacteriochlorophyll synthase 34 kDa chain OS=Chlor... [more]
BCHG_RHOCA2.463e-1446.75Bacteriochlorophyll synthase 33 kDa chain OS=Rhodo... [more]
BCHG_RHOS41.035e-1242.86Bacteriochlorophyll synthase 33 kDa chain OS=Rhodo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-009-A02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736017 ID=EY736017; Name=EY736017; organism=Citrus sinensis; type=EST; length=895bp
CCCCCCCCCCCCCCCCCCCCCCCCGGCTTGGGTTNNNATAACGTGGTAAC
CTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGCCGTCGCGGAGA
CTGACGGTGAGAGCACAGGAGCCTAATGCAAATGAAGTTAAACCGCAAGC
GACCGATAAAGCCCCGGCTGCTAGTGGATCGAGCTTCAATCAGCTTCTTG
GCATTAAGGGAGCTGCACAAGAAACTAATAAATGGAAGATTCGTCTTCAA
CTAACAAAGCCTGTTACCTGGCCTCCGTTGATTTGGGGAATAGTTTGTGG
TGCTGCTGCTTCTGGAAACTTTCACTGGAATGTGGAGGATGTTGCTAAAT
CAATTGTCTGTATGATCATGTCTGGCCCGTGTCTCACTGGCTACACACAG
ACGATTAATGATTGGTATGATCGAGAGATTGATGCAAGTAATGAACCCTA
TCGTCCAATTCCTTCAGGTGCAATATCCTGACAATGAGGTCATTACCCAG
ATCTGGGTTTTACTGCTAGGCAGGCCTTGGATTACCTGGTTTATTAGACG
TGTGGGCAGGGCATGACTTCCCAACGATTTTTCGGCTTGCCTGTGGGTCG
ATCCTCTGCATCATACATATACTCTGGCTCCACTTCGAAACTGCAACCAA
ACGGATGGGACTGGAACTCTCGCCCTGGGCACACCCCCCCACACTCCCCC
AGGGTGGGGAACGACAACCTCGCTTTTGGGGACCCTACCCCCGGAAGGAA
TATCTCTCCCCATCTTGGTGCACCAATCGCGGCGTGTGGGGTCCGGCGGT
CTTGCGGGAGCTAAGCGCCCTAACAACAAGACCGCCGCGGCGGAGCGCCC
AGGGGAGGTGTGGGGCCGCGAGGGCCCCCCACAGAACCGCCCGAG
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