EY735906

Overview
NameEY735906
Unique NameEY735906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735906 vs. ExPASy Swiss-Prot
Match: PDX1_HEVBR (Probable pyridoxal biosynthesis protein PDX1 OS=Hevea brasiliensis GN=PDX1 PE=2 SV=1)

HSP 1 Score: 350.903 bits (899), Expect = 5.152e-96
Identity = 185/216 (85.65%), Postives = 190/216 (87.96%), Query Frame = 3
Query:   12 AGTGVVAVYGNDGAITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVKHVRSVMXXXXXXXXXXXXXXXXXXXEHAAPLHLVRGTK 659
            AGTGVVAVYGN GAITETKKSPFSVKVGLAQMLRGGVIMDVV PEQAR+AEEAGACAVMALERVPADIR+QGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGN+IEAV+HVRSVM                   + AAP  LV  TK
Sbjct:    2 AGTGVVAVYGN-GAITETKKSPFSVKVGLAQMLRGGVIMDVVNPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVIEAVRHVRSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVMQTK 216          
BLAST of EY735906 vs. ExPASy Swiss-Prot
Match: PDX13_ARATH (Pyridoxal biosynthesis protein PDX1.3 OS=Arabidopsis thaliana GN=PDX13 PE=1 SV=2)

HSP 1 Score: 332.798 bits (852), Expect = 1.452e-90
Identity = 176/215 (81.86%), Postives = 185/215 (86.05%), Query Frame = 3
Query:   15 GTGVVAVYGNDGAITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVKHVRSVMXXXXXXXXXXXXXXXXXXXEHAAPLHLVRGTK 659
            GTGVVAVYGN GAITE KKSPFSVKVGLAQMLRGGVIMDVV  EQAR+AEEAGACAVMALERVPADIR+QGGVARMSDPQ+IKEIKQ+VTIPVMAKARIGHFVEAQILEAIGIDY+DESEVLT ADE++HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAV+HVRSV                    + AAP  LV  TK
Sbjct:    3 GTGVVAVYGN-GAITEAKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDESEVLTLADEDHHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVNGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQTK 216          
BLAST of EY735906 vs. ExPASy Swiss-Prot
Match: PDX1_PHAVU (Pyridoxal biosynthesis protein PDX1 OS=Phaseolus vulgaris GN=PDX1 PE=2 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 1.605e-89
Identity = 173/215 (80.47%), Postives = 183/215 (85.12%), Query Frame = 3
Query:   15 GTGVVAVYGNDGAITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVKHVRSVMXXXXXXXXXXXXXXXXXXXEHAAPLHLVRGTK 659
            G+ VVA+Y  +GAITETKKSPFSVKVGLAQMLRGGVIMDVV  +QAR+AEEAGACAVMALERVPADIR+QGGVARMSDPQLIKEIK++VTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLT AD+ NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAV+HVRSVM                     AAP  LV  TK
Sbjct:    5 GSRVVALYDGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKEIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADDANHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMSDIRVLRNMDDDEVFTFAKSIAAPYDLVMQTK 219          
BLAST of EY735906 vs. ExPASy Swiss-Prot
Match: PDX11_ARATH (Pyridoxal biosynthesis protein PDX1.1 OS=Arabidopsis thaliana GN=PDX11 PE=1 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 3.027e-88
Identity = 172/217 (79.26%), Postives = 186/217 (85.71%), Query Frame = 3
Query:   12 AGTGVVAVYGNDGAITETK-KSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVKHVRSVMXXXXXXXXXXXXXXXXXXXEHAAPLHLVRGTK 659
            AGTGVVAVYG +GA+TETK KSPFSVKVGLAQMLRGGVIMDVV  EQAR+AEEAGACAVMALERVPADIR+QGGVARMSDP++IKEIK +VTIPVMAKARIGHFVEAQILEAIG+DYVDESEVLT ADE+NHINKHNF+IPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGN++EAV+HVRSV                    + AAP  LV  TK
Sbjct:    2 AGTGVVAVYG-EGAMTETKQKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPEMIKEIKNAVTIPVMAKARIGHFVEAQILEAIGVDYVDESEVLTLADEDNHINKHNFKIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVVEAVRHVRSVNGAIRLLRSMDDDEVFTYAKKIAAPYDLVVQTK 217          
BLAST of EY735906 vs. ExPASy Swiss-Prot
Match: PDX1_GINBI (Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba GN=PDX1 PE=2 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.077e-85
Identity = 167/216 (77.31%), Postives = 180/216 (83.33%), Query Frame = 3
Query:   12 AGTGVVAVYGNDGAITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVKHVRSVMXXXXXXXXXXXXXXXXXXXEHAAPLHLVRGTK 659
            A  GVV VYG DGAIT+TK S ++VKVGLAQMLRGGVIMDVV  EQAR+AEEAGA AVMALERVPADIR+QGGVARMSDP LIKEIK +VTIPVMAKARIGHFVEAQILEAIGIDY+DESEVLTPAD+ +HINKHNFRIPFVCGCRNLGEALRRI EGAAMIRTKGEAGTGN+IEAV+HVRSV+                   + AAP  LVR TK
Sbjct:    2 ASDGVVTVYG-DGAITDTKVSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVMALERVPADIRAQGGVARMSDPGLIKEIKSAVTIPVMAKARIGHFVEAQILEAIGIDYIDESEVLTPADDXHHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVIEAVRHVRSVLGDIRKLQSLDDDEVFAFAKQIAAPYELVRQTK 216          
BLAST of EY735906 vs. ExPASy Swiss-Prot
Match: PDX11_ORYSJ (Probable pyridoxal biosynthesis protein PDX1.1 OS=Oryza sativa subsp. japonica GN=PDX11 PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 2.245e-83
Identity = 164/221 (74.21%), Postives = 180/221 (81.45%), Query Frame = 3
Query:   15 GTGVVAVYG---NDGAITET---KKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVKHVRSVMXXXXXXXXXXXXXXXXXXXEHAAPLHLVRGTK 659
            GTGVV VYG   N  A+ E    K + FSVKVGLAQMLRGGVIMDVVTPEQAR+AEEAGACAVMALERVPADIR+QGGVARMSDP LI++IK++VTIPVMAKARIGHFVEAQILEAIG+DYVDESEVLT AD+ +HINKHNFR+PFVCGCR+LGEALRRIREGAAMIRTKGEAGTGN++EAV+HVRSVM                     AAP  LV  TK
Sbjct:    5 GTGVVTVYGSGTNGAALLEPSNHKSATFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAIGVDYVDESEVLTLADDAHHINKHNFRVPFVCGCRDLGEALRRIREGAAMIRTKGEAGTGNVVEAVRHVRSVMGDIRALRNMDDDEVFSYAKRIAAPYDLVMQTK 225          
BLAST of EY735906 vs. ExPASy Swiss-Prot
Match: PDX12_ORYSJ (Probable pyridoxal biosynthesis protein PDX1.2 OS=Oryza sativa subsp. japonica GN=PDX12 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 9.432e-82
Identity = 159/215 (73.95%), Postives = 176/215 (81.86%), Query Frame = 3
Query:   15 GTGVVAVYGNDGAITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVKHVRSVMXXXXXXXXXXXXXXXXXXXEHAAPLHLVRGTK 659
            GT VVA+YG    ++  K   FSVKVGLAQMLRGGVIMDVVTPEQAR+AEEAGACAVMALERVPADIR+QGGVARMSDP LI++IK+SVTIPVMAKARIGH VEAQILEAIG+DYVDESEVLT AD+ +HINK+NFR+PFVCGCR+LGEALRRIREGAAMIRTKGEAGTGN++EAV+HVRSVM                     AAP  LV  TK
Sbjct:    5 GTDVVALYGGANGLSH-KSGSFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPGLIRDIKRSVTIPVMAKARIGHLVEAQILEAIGVDYVDESEVLTLADDAHHINKNNFRVPFVCGCRDLGEALRRIREGAAMIRTKGEAGTGNVVEAVRHVRSVMGDIRALRSMDDDEVFSYAKRIAAPYDLVMQTK 218          
BLAST of EY735906 vs. ExPASy Swiss-Prot
Match: PDXS_CHLAD (Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=pdxS PE=3 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.193e-76
Identity = 139/165 (84.24%), Postives = 157/165 (95.15%), Query Frame = 3
Query:   66 KKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVKHVRSV 560
            +KS ++ KVGLAQML+GGVIMDVVTPEQAR+AEEAGA AVMALERVPADIR+QGGVARMSDP+LI  IKQ+VTIPVMAKARIGHFVEAQ+LEAIG+DY+DESEVLTPADEE+HINKH FR+PFVCGCRNLGEALRRI EGAAM+RTKGEAGTGN++EAV+H R+V
Sbjct:    2 EKSTWTTKVGLAQMLKGGVIMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVARMSDPELILAIKQAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADEEHHINKHKFRVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARAV 166          
BLAST of EY735906 vs. ExPASy Swiss-Prot
Match: PDXS_CHLSY (Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=pdxS PE=3 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.558e-76
Identity = 138/165 (83.64%), Postives = 157/165 (95.15%), Query Frame = 3
Query:   66 KKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVKHVRSV 560
            +KS ++ KVGLAQML+GGVIMDVVTPEQAR+AEEAGA AVMALERVPADIR+QGGVARMSDP+LI  IKQ+VTIPVMAKARIGHFVEAQ+LEAIG+DY+DESEVLTPADEE+HINKH FR+PFVCGCRNLGEALRR+ EGAAM+RTKGEAGTGN++EAV+H R+V
Sbjct:    2 EKSTWTTKVGLAQMLKGGVIMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVARMSDPELILAIKQAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADEEHHINKHKFRVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARAV 166          
BLAST of EY735906 vs. ExPASy Swiss-Prot
Match: PDXS_CHLAA (Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=pdxS PE=3 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.558e-76
Identity = 138/165 (83.64%), Postives = 157/165 (95.15%), Query Frame = 3
Query:   66 KKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVKHVRSV 560
            +KS ++ KVGLAQML+GGVIMDVVTPEQAR+AEEAGA AVMALERVPADIR+QGGVARMSDP+LI  IKQ+VTIPVMAKARIGHFVEAQ+LEAIG+DY+DESEVLTPADEE+HINKH FR+PFVCGCRNLGEALRR+ EGAAM+RTKGEAGTGN++EAV+H R+V
Sbjct:    2 EKSTWTTKVGLAQMLKGGVIMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVARMSDPELILAIKQAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADEEHHINKHKFRVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARAV 166          
The following BLAST results are available for this feature:
BLAST of EY735906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
PDX1_HEVBR5.152e-9685.65Probable pyridoxal biosynthesis protein PDX1 OS=He... [more]
PDX13_ARATH1.452e-9081.86Pyridoxal biosynthesis protein PDX1.3 OS=Arabidops... [more]
PDX1_PHAVU1.605e-8980.47Pyridoxal biosynthesis protein PDX1 OS=Phaseolus v... [more]
PDX11_ARATH3.027e-8879.26Pyridoxal biosynthesis protein PDX1.1 OS=Arabidops... [more]
PDX1_GINBI1.077e-8577.31Probable pyridoxal biosynthesis protein PDX1 OS=Gi... [more]
PDX11_ORYSJ2.245e-8374.21Probable pyridoxal biosynthesis protein PDX1.1 OS=... [more]
PDX12_ORYSJ9.432e-8273.95Probable pyridoxal biosynthesis protein PDX1.2 OS=... [more]
PDXS_CHLAD1.193e-7684.24Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus ... [more]
PDXS_CHLSY1.558e-7683.64Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus ... [more]
PDXS_CHLAA1.558e-7683.64Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-E11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735906 ID=EY735906; Name=EY735906; organism=Citrus sinensis; type=EST; length=837bp
CACGCGTCCGGGCAGGTACCGGAGTGGTGGCGGTCTACGGTAATGACGGC
GCTATAACGGAGACTAAAAAATCTCCATTCTCCGTTAAAGTCGGTCTAGC
TCAGATGCTTCGAGGCGGCGTTATAATGGACGTCGTTACTCCCGAGCAAG
CGCGAGTCGCGGAAGAGGCTGGTGCGTGCGCCGTCATGGCTCTTGAGCGC
GTCCCCGCCGATATCCGCTCGCAAGGCGGCGTGGCTCGCATGTCTGACCC
GCAACTTATCAAGGAAATCAAACAGTCCGTCACCATCCCCGTCATGGCCA
AGGCTCGTATTGGTCACTTCGTCGAAGCTCAAATTCTCGAAGCTATTGGG
ATCGATTACGTCGACGAGAGCGAAGTCTTGACTCCCGCCGACGAAGAGAA
TCACATCAACAAGCACAACTTTCGTATCCCCTTCGTATGCGGCTGCCGGA
ACTTGGGGGAAGCTTTGAGGAGGATTCGCGAAGGCGCGGCGATGATAAGA
ACGAAGGGCGAGGCCGGAACGGGGAATATTATCGAAGCGGTGAAGCACGT
GCGGTCTGTGATGGGGGATATTGGGGGGCTGACGGGCGTGGGAGGATGAA
GAGGTGTTCGCTGGGGGGGGGAACATGCGGCGCCCCTTCACTTGGTGAGG
GGAACGAAGGGGGCCTGGCAGTGCCGAGGGGGGGTGCGGCGGGGGGGAGG
GGGGGGGACAGGAGGGCGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGG
GGCGGCCGTTTATAGGCGCGCAGCGATCTGAGAAGGGGAGGAGGGAGAAG
GGGGGGGGGGGTGGGGGGGGGGGGGGGGGGAGGAGGA
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