EY735897

Overview
NameEY735897
Unique NameEY735897
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735897 vs. ExPASy Swiss-Prot
Match: AHM2_ARATH (Putative cadmium/zinc-transporting ATPase 2 OS=Arabidopsis thaliana GN=HMA4 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 3.007e-38
Identity = 77/157 (49.04%), Postives = 106/157 (67.52%), Query Frame = 2
Query:   11 RTRGMKSQK-KWPAPSVMXXXXXXXXXXXXYIYYPLQSLAVAAVIFGVPAILVRSVASIKRLTLNINVLVLMAAVGTLALGDYVEAGSIVFLFSISQWLESVASYKXXXXXXXXXXXXPQKAIIAETGEQVDVNTVKVNTILAVRAGEVIPIDGIIV 478
            R  G  S K KWP+P  +            ++Y PL+ LAVAAV  G+  IL ++ ASIKR  ++IN+LV++  + TLA+ D++EA ++VFLF+IS WLE+ ASYK            PQKAIIAETGE+V+V+ VKV+T++AV+AGE IPIDGI+V
Sbjct:   85 RVNGETSFKNKWPSPFAVVSGLLLLLSFLKFVYSPLRWLAVAAVAAGIYPILAKAFASIKRPRIDINILVIITVIATLAMQDFMEAAAVVFLFTISDWLETRASYKATSVMQSLMSLAPQKAIIAETGEEVEVDEVKVDTVVAVKAGETIPIDGIVV 241          

HSP 2 Score: 33.8834 bits (76), Expect = 3.007e-38
Identity = 16/30 (53.33%), Postives = 21/30 (70.00%), Query Frame = 3
Query:  459 PLMELLFDVNGEVDEKTLTGECGPVGDERE 548
            P+  ++ D N EVDEKTLTGE  PV  +R+
Sbjct:  235 PIDGIVVDGNCEVDEKTLTGEAFPVPKQRD 264          
BLAST of EY735897 vs. ExPASy Swiss-Prot
Match: AHM3_ARATH (Putative cadmium/zinc-transporting ATPase 3 OS=Arabidopsis thaliana GN=HMA2 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.013e-35
Identity = 67/149 (44.97%), Postives = 99/149 (66.44%), Query Frame = 2
Query:   32 QKKWPAPSVMXXXXXXXXXXXXYIYYPLQSLAVAAVIFGVPAILVRSVASIKRLTLNINVLVLMAAVGTLALGDYVEAGSIVFLFSISQWLESVASYKXXXXXXXXXXXXPQKAIIAETGEQVDVNTVKVNTILAVRAGEVIPIDGIIV 478
            + KWP+P  +            Y+Y P + LAVAAV+ G+  IL ++VAS+ R  ++IN+LV++    T+ + DY EA  +VFLF+I++WL+S ASYK            PQKA+IAETGE+V+V+ +K NT++AV+AGE IPIDG++V
Sbjct:   83 KNKWPSPFAVVSGILLLLSFFKYLYSPFRWLAVAAVVAGIYPILAKAVASLARFRIDINILVVVTVGATIGMQDYTEAAVVVFLFTIAEWLQSRASYKASAVMQSLMSLAPQKAVIAETGEEVEVDELKTNTVIAVKAGETIPIDGVVV 231          

HSP 2 Score: 31.187 bits (69), Expect = 1.013e-35
Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = 3
Query:  459 PLMELLFDVNGEVDEKTLTGECGPV 533
            P+  ++ D N EVDEKTLTGE  PV
Sbjct:  225 PIDGVVVDGNCEVDEKTLTGEAFPV 249          
BLAST of EY735897 vs. ExPASy Swiss-Prot
Match: AHM4_ARATH (Cadmium/zinc-transporting ATPase 4 OS=Arabidopsis thaliana GN=HMA3 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 4.106e-34
Identity = 68/152 (44.74%), Postives = 99/152 (65.13%), Query Frame = 2
Query:   23 MKSQKKWPAPSVMXXXXXXXXXXXXYIYYPLQSLAVAAVIFGVPAILVRSVASIKRLTLNINVLVLMAAVGTLALGDYVEAGSIVFLFSISQWLESVASYKXXXXXXXXXXXXPQKAIIAETGEQVDVNTVKVNTILAVRAGEVIPIDGIIV 478
            +KSQ  WP+P  +            Y Y PL+ LA+ AV+ GV  IL ++VAS+ R  L+IN L L+A + TL + D+ EA +IVFLFS++ WLES A++K            P+KA+IA+TG +VDV+ V +NT+++V+AGE IPIDG++V
Sbjct:   88 LKSQ--WPSPFAIVSGVLLVLSFFKYFYSPLEWLAIVAVVAGVFPILAKAVASVTRFRLDINALTLIAVIATLCMQDFTEAATIVFLFSVADWLESSAAHKASIVMSSLMSLAPRKAVIADTGLEVDVDEVGINTVVSVKAGESIPIDGVVV 237          

HSP 2 Score: 31.9574 bits (71), Expect = 4.106e-34
Identity = 15/30 (50.00%), Postives = 21/30 (70.00%), Query Frame = 3
Query:  459 PLMELLFDVNGEVDEKTLTGECGPVGDERE 548
            P+  ++ D + +VDEKTLTGE  PV  +RE
Sbjct:  231 PIDGVVVDGSCDVDEKTLTGESFPVSKQRE 260          
The following BLAST results are available for this feature:
BLAST of EY735897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AHM2_ARATH3.007e-3849.04Putative cadmium/zinc-transporting ATPase 2 OS=Ara... [more]
AHM3_ARATH1.013e-3544.97Putative cadmium/zinc-transporting ATPase 3 OS=Ara... [more]
AHM4_ARATH4.106e-3444.74Cadmium/zinc-transporting ATPase 4 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-D11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735897 ID=EY735897; Name=EY735897; organism=Citrus sinensis; type=EST; length=868bp
CACGCGTCCGCGGACGCGTGGGATGAAATCTCAGAAGAAGTGGCCCGCCC
CATCAGTCATGGCTTCGGGATTGTTACTTGCACTATCATTTCTAGGATAT
ATTTATTATCCATTGCAATCTTTGGCTGTCGCTGCAGTCATCTTTGGAGT
CCCTGCAATATTAGTAAGAAGCGTAGCATCAATTAAGCGCCTCACTCTTA
ATATAAATGTTCTTGTTCTGATGGCAGCTGTGGGAACTCTTGCTCTTGGA
GATTATGTGGAAGCTGGTTCTATTGTCTTTTTATTCTCTATTTCTCAGTG
GCTTGAGTCGGTAGCAAGCTACAAGGCTATGGCCGCCATGTCATCTTTGA
CAAGCATGGCTCCTCAGAAGGCCATAATTGCCGAAACTGGGGAACAAGTT
GATGTGAATACAGTGAAGGTGAATACAATCCTTGCCGTCAGGGCCGGCGA
AGTAATTCCCATTGATGGAATTATTGTTCGACGTAAATGGTGAGGTGGAT
GAAAAAACACTGACCGGAGAGTGCGGCCCGGTGGGCGACGAGCGGGAGTC
GCCACTGCTGCGCTCGCCGCGTCGCGGGGGACGGGGGAATGCGCTATGGG
GCGGACGGCCGAGGCCCGGAACGCGGTGGGCCCCGCGACTGCCGGCCGCC
ACTCACCCACTTCGCGGAGAGGAGGTGTCGGGCTCCGAAGCGAGGGGGCA
GGGTGAGGGGGCAGACGGCCAGCCGAGCGCCGCCGCGGGGGCCCGCGCCG
GCGGGCGCAGCGGACAGCGGGGGGCGCGCGGACCAGCACAGACAAAACAA
CCAACGTTAAACCTTCAAGACCCACAACCGGGGGCGCCCCCCCCCGGGGG
GGCGGGGTCAACGAGCGC
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