EY735850
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY735850 vs. ExPASy Swiss-Prot
Match: RBM39_PONAB (RNA-binding protein 39 OS=Pongo abelii GN=RBM39 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.067e-20 Identity = 73/223 (32.74%), Postives = 103/223 (46.19%), Query Frame = 3 Query: 111 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTXXXXXXXXXXLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNXXXXXXXXXXXXXXXXXVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPXECLLLKNMFDPKNETYQEFDMDIKEDVEGEC 776 RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL E+ GR +KV VT+++ A++ + L R LM +L G + PA V+ L L Q T +AL + P+ +C L NMF+P+ E +D +IK+DV EC Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDAS--SASSFLDSDELERTGIDLGTTGRLQLMARLAEG------TGLQIPPAAQ----QALQMSGSLAFGAVADLQTRLSQQTE-------ASALAAAASVQPL------ATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEEC 448
BLAST of EY735850 vs. ExPASy Swiss-Prot
Match: RBM39_MOUSE (RNA-binding protein 39 OS=Mus musculus GN=Rbm39 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.035e-19 Identity = 72/224 (32.14%), Postives = 103/224 (45.98%), Query Frame = 3 Query: 111 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTXXXXXXXXXXLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNXXXXXXXXXXXXXXXXXVSTLVPPLVQGTVPTHPGQLGTALQV-PTASVPIFDTIGVPXECLLLKNMFDPKNETYQEFDMDIKEDVEGEC 776 RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL E+ GR +KV VT+++ A++ + L R LM +L G + PA S ++ + + T L A V P A+ +C L NMF+P+ E +D +IK+DV EC Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDAS--SASSFLDSDELERTGIDLGTTGRLQLMARLAEG------TGLQIPPAAQ-QALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLAT-----------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEEC 454
BLAST of EY735850 vs. ExPASy Swiss-Prot
Match: RBM39_HUMAN (RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.035e-19 Identity = 72/224 (32.14%), Postives = 103/224 (45.98%), Query Frame = 3 Query: 111 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTXXXXXXXXXXLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNXXXXXXXXXXXXXXXXXVSTLVPPLVQGTVPTHPGQLGTALQV-PTASVPIFDTIGVPXECLLLKNMFDPKNETYQEFDMDIKEDVEGEC 776 RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL E+ GR +KV VT+++ A++ + L R LM +L G + PA S ++ + + T L A V P A+ +C L NMF+P+ E +D +IK+DV EC Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDAS--SASSFLDSDELERTGIDLGTTGRLQLMARLAEG------TGLQIPPAAQ-QALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLAT-----------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEEC 454
BLAST of EY735850 vs. ExPASy Swiss-Prot
Match: RSD1_SCHPO (RNA-binding protein rsd1 OS=Schizosaccharomyces pombe GN=rsd1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.809e-14 Identity = 59/223 (26.46%), Postives = 95/223 (42.60%), Query Frame = 3 Query: 111 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTXXXXXXXXXXLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNXXXXXXXXXXXXXXXXXVSTLVPPLVQG-TVPTHPGQLGTALQVPTASVPIFDTIGVPXECLLLKNMFDPKNETYQEFDMDIKEDVEGEC 776 RL V N+HFN+T++ ++ +FEPFG +E V L D+ KGFG++Q+ ARNAL ++ GR ++V D+ TT L+ RS Q R+G ++T A L+ L + + + +L + + P S C LL+NMF+P ET + ++++DV+ EC Sbjct: 341 RLCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRDDQNRSKGFGYIQYRNPISARNALEKMNGFDLAGRNMRVCLGNDK-----FTTETTSSMLKRFDETLARQERS-----QPSQRNGGSSTYESQDYREAAPLSPTEEESRPITR-----DELMKKLARSEDISDNSSKLVSEPEPPIRS-----------RCALLENMFNPAEETSPNWVQELEQDVKEEC 537
BLAST of EY735850 vs. ExPASy Swiss-Prot
Match: RBM23_HUMAN (Probable RNA-binding protein 23 OS=Homo sapiens GN=RBM23 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.809e-14 Identity = 39/79 (49.37%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 111 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQ 344 RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL E+ GR ++V VT++ Sbjct: 264 RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTER 342 The following BLAST results are available for this feature:
BLAST of EY735850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735850 ID=EY735850; Name=EY735850; organism=Citrus sinensis; type=EST; length=847bpback to top |