EY735766

Overview
NameEY735766
Unique NameEY735766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735766_ssr20 microsatellite EY735766_ssr20:20..31. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13654 contig Csv1_Contig13654:52..882. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735766 vs. ExPASy Swiss-Prot
Match: M2OM_NEUCR (Putative mitochondrial 2-oxoglutarate/malate carrier protein OS=Neurospora crassa GN=NCU10732 PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.393e-53
Identity = 119/242 (49.17%), Postives = 151/242 (62.40%), Query Frame = 3
Query:  120 PFVNGGASGMLATCVIQPIDMIKVRIQL-GQGSAGT-------VTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNK--AIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFKDACGLSELPTVIGASTVSGFFASACSLPLDYVKTQIQKMHPDAQGKYPYQAL 815
            PF+NGG SGM+AT VIQPIDMIKVRIQL G+G AG        VT+ ++ +      Y GLSAGLLRQA YTTAR+G F    ++  A     G+ +   ++A  GL AG + A +G+PADLALIRMQ+D   P A+R+NY +   AL  I  +EGV ALW GA PTVVRAMALN G LA + ++    K     S     + AS ++GFFAS  SLP D+VKT++QK      GK PY  +
Sbjct:   44 PFINGGLSGMVATTVIQPIDMIKVRIQLAGEGKAGGPKPTPLGVTRDIIASGKAMDLYTGLSAGLLRQAVYTTARIGCFDTFMSRLSARAKEKGQSVGFKERASAGLAAGGLAAMIGNPADLALIRMQSDGLKPVAERKNYKSVIDALGGIARNEGVAALWAGAAPTVVRAMALNFGQLAFFSEAKAQLKARTQWSSKVQTLSASAIAGFFASFFSLPFDFVKTRLQKQTRGPDGKLPYNGM 285          
BLAST of EY735766 vs. ExPASy Swiss-Prot
Match: M2OM_MOUSE (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Mus musculus GN=Slc25a11 PE=1 SV=3)

HSP 1 Score: 193.741 bits (491), Expect = 1.033e-48
Identity = 114/232 (49.14%), Postives = 145/232 (62.50%), Query Frame = 3
Query:  108 PTVKPFVNGGASGMLATCVIQPIDMIKVRIQL-GQGSAGTVTKT-------MLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFKDACGLSE-LPTVIGASTVSGFFASACSLPLDYVKTQIQKM 776
            P    F+ GG +GM AT  +QP+D++K R+QL G+G+     KT       +LK EG    Y GLSAGLLRQATYTT RLG + +L  +   A DG P     KAL G+TAGA GA VG+PA++ALIRM AD  LPA QRR Y N F AL RI  +EGV  LW+G  PT+ RA+ +N   LASY QS +F  D+   S+ +     AS +SG   +A S+P+D VKT+IQ M
Sbjct:   20 PKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILKTEGLKGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGA-DGTPPGFLLKALIGMTAGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALVRIAREEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTRIQNM 250          
BLAST of EY735766 vs. ExPASy Swiss-Prot
Match: M2OM_HUMAN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Homo sapiens GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 192.971 bits (489), Expect = 1.762e-48
Identity = 113/232 (48.71%), Postives = 145/232 (62.50%), Query Frame = 3
Query:  108 PTVKPFVNGGASGMLATCVIQPIDMIKVRIQL-GQGSAGTVTKT-------MLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFKDACGLSE-LPTVIGASTVSGFFASACSLPLDYVKTQIQKM 776
            P    F+ GG +GM AT  +QP+D++K R+QL G+G+     KT       +LK EG    Y GLSAGLLRQATYTT RLG + +L  +   A DG P     KA+ G+TAGA GA VG+PA++ALIRM AD  LPA QRR Y N F AL RI  +EGVL LW+G  PT+ RA+ +N   LASY QS +F  D+   S+ +     AS +SG   +A S+P+D  KT+IQ M
Sbjct:   20 PKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGA-DGTPPGFLLKAVIGMTAGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNM 250          
BLAST of EY735766 vs. ExPASy Swiss-Prot
Match: M2OM_BOVIN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 192.2 bits (487), Expect = 3.006e-48
Identity = 112/232 (48.28%), Postives = 146/232 (62.93%), Query Frame = 3
Query:  108 PTVKPFVNGGASGMLATCVIQPIDMIKVRIQL-GQGSAGTVTKT-------MLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFKDACGLSE-LPTVIGASTVSGFFASACSLPLDYVKTQIQKM 776
            P    F+ GG +GM AT  +QP+D++K R+QL G+G+     KT       +L+ EG    Y GLSAGLLRQATYTT RLG + +L  +   A DG P     KA+ G+TAGA GA VG+PA++ALIRM AD  LP  QRR Y N F AL+RIV +EGV  LW+G  PT+ RA+ +N   LASY QS +F  D+   S+ +     AS +SG   +A S+P+D VKT+IQ M
Sbjct:   20 PKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALISILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGA-DGTPPGFLLKAVIGMTAGATGAFVGTPAEVALIRMTADGRLPVDQRRGYKNVFNALFRIVQEEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTRIQNM 250          
BLAST of EY735766 vs. ExPASy Swiss-Prot
Match: M2OM_DICDI (Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum GN=ucpC PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.492e-47
Identity = 107/242 (44.21%), Postives = 148/242 (61.16%), Query Frame = 3
Query:  114 VKPFVNGGASGMLATCVIQPIDMIKVRIQL-GQGSAGTVTKTMLK-------NEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFKDACGL--SELPTVIGASTVSGFFASACSLPLDYVKTQIQKMHPDAQGKYPYQ 809
            +K FV GG +GML++    PID +KVR+QL G+G+     +  LK        EGF   YKGLSA LLRQATYTT R G + ++  K I A D KPLP  QK + G+ +GA GA VG+PADL ++RMQAD  LP   RRNY N F  ++RI  +EG+++LWKG  P ++RAM +  G ++SYDQ+ +    A G    ++ T + AST + F A+  + PLD +KT+I        G+  Y+
Sbjct:   25 LKQFVIGGLAGMLSSAFTHPIDSLKVRMQLQGEGTGVGPKRGALKMLVHINQTEGFFTLYKGLSASLLRQATYTTTRFGLYDLI--KDIVAKDDKPLPFTQKIMVGMLSGAGGAIVGTPADLTMVRMQADGKLPFNLRRNYKNVFDGIFRISKEEGIISLWKGCSPNLIRAMFMTAGQVSSYDQTKQLML-ASGYFHDDIKTHLIASTTAAFVAAVATSPLDVIKTRIMNSPKTVTGELQYK 263          
BLAST of EY735766 vs. ExPASy Swiss-Prot
Match: M2OM_RAT (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus GN=Slc25a11 PE=2 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 7.404e-47
Identity = 112/232 (48.28%), Postives = 142/232 (61.21%), Query Frame = 3
Query:  108 PTVKPFVNGGASGMLATCVIQPIDMIKVRIQL-GQGSAGTVTKT-------MLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFKDACGLSE-LPTVIGASTVSGFFASACSLPLDYVKTQIQKM 776
            P    F+ GG +GM AT  +QP+D++  R+QL G+G+     KT       +LK EG    Y GLSAGLLRQATYTT RLG + +L  +   A DG P     KAL G+TAGA GA VG PA++ALIRM AD  LPA QRR Y N F AL RI  +EGV  LW+G  PT+ RA+ +N   LASY QS +F  D+   S+ +     A  +SG   +A S+P+D VKT+IQ M
Sbjct:   20 PKSVKFLFGGLAGMGATVFVQPLDLVXNRMQLSGEGAKTREYKTSFHALTSILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGA-DGTPPGFLLKALIGMTAGATGAFVGPPAEVALIRMTADGRLPADQRRGYKNVFNALIRIAREEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCAIMISGLVTTAASMPVDIVKTRIQNM 250          
BLAST of EY735766 vs. ExPASy Swiss-Prot
Match: UCPB_DICDI (Mitochondrial substrate carrier family protein ucpB OS=Dictyostelium discoideum GN=ucpB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.557e-31
Identity = 90/233 (38.63%), Postives = 125/233 (53.65%), Query Frame = 3
Query:  123 FVNGGASGMLATCVIQPIDMIKVRIQL-GQG----SAGTVTKTM--LKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFKD--ACGLSELPTVIGASTVSGFFASACSLPLDYVKTQIQKMHPDAQG 794
            F+ GG S M A  V  P+D++K R Q+ G+G    S G V  T+  +KNEG  A YKGL+  LLR+ATY+T R+G + ++ N  I++N GK   L  K   G  +GA+GA + SP DL  +RMQA     +++   Y +   A   I+A EG+  LWKG GPT  RA  L    + SYD       D     +  L   I +S  +G  AS  + P+D VKT+I     D+ G
Sbjct:   11 FLFGGLSCMGAAVVSNPVDVLKTRFQIHGEGIDSKSLGLVNGTIKIIKNEGISAMYKGLTPSLLREATYSTLRMGGYDVIKNYFIDSN-GK-TNLLSKVTSGALSGALGACITSPTDLIKVRMQA-----SSKGVKYDSISSAFKEIIAKEGIKGLWKGVGPTTQRAALLTASQIPSYDHIKHMILDHGIIQVDGLQVHIVSSIFAGLIASITTSPVDLVKTRIMNQPFDSNG 236          
BLAST of EY735766 vs. ExPASy Swiss-Prot
Match: DIC_HUMAN (Mitochondrial dicarboxylate carrier OS=Homo sapiens GN=SLC25A10 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 4.361e-31
Identity = 80/227 (35.24%), Postives = 120/227 (52.86%), Query Frame = 3
Query:  132 GGASGMLATCVIQPIDMIKVRIQLGQGSAGTVTKTMLK---NEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFKDACGLSE-LPTVIGASTVSGFFASACSLPLDYVKTQIQKMHPDAQGKY 800
            GG +   A C   P+D++KV +Q  Q     +T   L+    +G  A Y GLSA L RQ TY+  R   +  + ++  + + G PLP ++K L G  +G  G  VG+PADL  +RMQ D  LP  QRRNY +A   LYR+  +EG+  L+ GA     R   + +G L+ YDQ+ +       LS+ + T   AS ++G  A+    PLD +KT++     + QG +
Sbjct:   13 GGLASCGAACCTHPLDLLKVHLQTQQEVKLRMTGMALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQG-PLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLMNSKGEYQGVF 238          
BLAST of EY735766 vs. ExPASy Swiss-Prot
Match: DIC_MOUSE (Mitochondrial dicarboxylate carrier OS=Mus musculus GN=Slc25a10 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.827e-30
Identity = 82/230 (35.65%), Postives = 118/230 (51.30%), Query Frame = 3
Query:  132 GGASGMLATCVIQPIDMIKVRIQLGQGSAGTVTKTML---KNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFKDACGLSELPTVIGASTVSGFFASACSL----PLDYVKTQIQKMHPDAQGKY 800
            GG +   A C   P+D++KV +Q  Q     +T   L   + +GF A Y GLSA L RQ TY+  R   +  + +   + + G PLP Y K L G  +G  G  VG+PADL  +RMQ D  LP +QRRNY++A   LYR+  +E +  L+ GA     R   + +G L+ YDQ+ +       LS+    I    VS F A  C+     PLD +KT++     + QG +
Sbjct:   12 GGLASCGAACCTHPLDLLKVHLQTQQEVKLRMTGMALQVVRTDGFLALYNGLSASLCRQMTYSLTRFAIYETMRDYMTKDSQG-PLPFYNKVLLGGISGLTGGFVGTPADLVNVRMQNDMKLPPSQRRNYSHALDGLYRVAREESLRKLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSD---NIFTHFVSSFIAGGCATFLCQPLDVLKTRLMNSKGEYQGVF 237          
BLAST of EY735766 vs. ExPASy Swiss-Prot
Match: DIC1_YEAST (Mitochondrial dicarboxylate transporter OS=Saccharomyces cerevisiae GN=DIC1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.646e-28
Identity = 86/234 (36.75%), Postives = 122/234 (52.14%), Query Frame = 3
Query:  120 PFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAGTVTK---TMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIE----ANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVL-ALWKGAGPTVVRAMALNMGMLASYDQSVEFF--KDACGLSELPTVIGASTVSGFFASACSLPLDYVKTQIQKMHPDAQ 791
            P+  GGA+G+ AT V  P+D+ KVR+Q       T+ +   ++L NEG    Y GLSA +LRQ TYTT R G++ +L    I      N    LP      C + +GAIG   G+ AD+  IRMQ D+ L AA+RRNY NA   +Y+I   EG L  L+ G  P +VR + +    + +YD    +   K     S+  T + AS ++G  A+    P D +KT+I     D Q
Sbjct:   16 PWWYGGAAGIFATMVTHPLDLAKVRLQAAPMPKPTLFRMLESILANEGVVGLYSGLSAAVLRQCTYTTVRFGAYDLLKENVIPREQLTNMAYLLP------CSMFSGAIGGLAGNFADVVNIRMQNDSALEAAKRRNYKNAIDGVYKIYRYEGGLKTLFTGWKPNMVRGILMTASQVVTYDVFKNYLVTKLDFDASKNYTHLTASLLAGLVATTVCSPADVMKTRIMNGSGDHQ 243          
The following BLAST results are available for this feature:
BLAST of EY735766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
M2OM_NEUCR1.393e-5349.17Putative mitochondrial 2-oxoglutarate/malate carri... [more]
M2OM_MOUSE1.033e-4849.14Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_HUMAN1.762e-4848.71Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_BOVIN3.006e-4848.28Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_DICDI1.492e-4744.21Probable mitochondrial 2-oxoglutarate/malate carri... [more]
M2OM_RAT7.404e-4748.28Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
UCPB_DICDI2.557e-3138.63Mitochondrial substrate carrier family protein ucp... [more]
DIC_HUMAN4.361e-3135.24Mitochondrial dicarboxylate carrier OS=Homo sapien... [more]
DIC_MOUSE2.827e-3035.65Mitochondrial dicarboxylate carrier OS=Mus musculu... [more]
DIC1_YEAST2.646e-2836.75Mitochondrial dicarboxylate transporter OS=Sacchar... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-G07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735766 ID=EY735766; Name=EY735766; organism=Citrus sinensis; type=EST; length=829bp
CACGCGTCCGAATCTTCTTTCTCTCTCTCTCTAGCCAGCTTAAGCTTTCT
TGGATCCAAAAGGAAAAAAATGGGAGAGGAGAAGAACCACAATCAGCTGG
TGTATGGCCCACCGTTAAGCCTTTTGTCAATGGTGGTGCCTCTGGTATGC
TTGCCACCTGTGTCATTCAGCCCATCGATATGATCAAGGTGAGAATTCAG
CTGGGCCAGGGATCCGCCGGTACTGTGACAAAGACTATGCTTAAGAATGA
GGGTTTTGGTGCCTTTTACAAGGGGTTGTCTGCTGGACTGCTCAGGCAAG
CTACATATACCACTGCTCGTCTTGGATCATTTAGGATCTTGACAAACAAA
GCAATTGAAGCCAATGACGGGAAGCCTCTTCCATTGTATCAGAAAGCCTT
GTGTGGGCTAACTGCTGGTGCTATTGGAGCTTCTGTTGGTAGTCCAGCAG
ATTTGGCACTTATCCGTATGCAGGCTGATGCCACACTACCTGCTGCTCAA
CGCCGCAATTACACTAATGCCTTCCAAGCTCTTTATCGTATTGTTGCAGA
TGAAGGGGTCTTAGCACTTTGGAAAGGTGCAGGTCCTACTGTTGTGAGAG
CTATGGCATTGAACATGGGCATGCTTGCCTCCTACGATCAAAGTGTTGAG
TTTTTCAAAGATGCGTGTGGCTTGTCTGAACTTCCTACAGTAATCGGGGC
GAGTACAGTGTCAGGGTTCTTTGCTTCAGCTTGCAGTTTACCCTTGGATT
ATGTCAAAACACAAATTCAGAAAATGCACCCAGATGCTCAAGGAAAGTAT
CCATACCAGGCTCTATGGACTGTGCCATA
back to top