EY735651

Overview
NameEY735651
Unique NameEY735651
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735651_ssr548 microsatellite EY735651_ssr548:548..562. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2792 contig Csv1_Contig2792:35..884. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY735651 vs. ExPASy Swiss-Prot
Match: B2_DAUCA (B2 protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.050e-11
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 3 
Query:  714 KTAADKRFKTLPPSEALPRHETIGCYIFVW*HDTMAENLKRQLFGL 851
            K   +KRFKTLPP+E+LPR+ET+G YIFV  +DTM ENLKRQLFGL
Sbjct:   52 KNGVEKRFKTLPPAESLPRNETVGGYIFVCNNDTMQENLKRQLFGL 97
The following BLAST results are available for this feature:
BLAST of EY735651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
B2_DAUCA1.050e-1171.74B2 protein OS=Daucus carota PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-C07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735651 ID=EY735651; Name=EY735651; organism=Citrus sinensis; type=EST; length=851bp
CCACGCGTCCGCCCACGCGTCCGTAAAGATTTGATTTTCCCCTGGTTTTT
GCTCTCTTTAAATAACCCTTTTTATATATTTGTAGAGATTAGGGATATAC
AAAGAAAAGATACCACATTCGTCCCGGATCATACATAAATTTTCTGTTTT
CTCGTGAATTAGTGTCTGAGATGGAGAACAATCAGCAGTCGTTTTGGCAA
TTCAGTGATCAACTGAGGGTGCAAGCATCAAACTTGGCTAATCTGTCACT
CAACGACTCGATCTGGAGCAACAATTATGGGTCGAAGAGGCCGGATGAAA
GGAGGAATTTCGACATCAGAGTCGGCGGTCAAGTGAATGTGAATCCATTC
ACTAAAGGGTCTGATTTGAACGCCTTCGATGATGGTTACAAGAGTATGAG
CAGCAACTACAACGATATTGGCCTAGGCCCTATCGGCCAGATTATGGCCC
CTGCCTCGGCCTCTCAAAAGAATGTTGGGATCAACGGTGGATTCAACAAA
GGGATTTATTCAAAGCCAGGTCATTTTGGTCTTAGCACCATCAACACCAA
CAACAACAACAACATCAACAGTTATATGAATGTTAATTTGAAGGGGAATA
GGAATAGGGAAGAGAATGATCATCATGGACTTGGAAGCAAGAGTGGCAAG
AAGAACAGCAACAAGAAGAACAATAACAAAGATGGTGACAATAATTCCGA
TAATAAGGACACTAAGACTGCTGCTGATAAGAGGTTCAAGACTCTCCCAC
CCTCGGAGGCTTTGCCGAGACACGAAACCATTGGGTGCTATATTTTTGTC
TGGTAACATGATACCATGGCTGAGAATCTCAAAAGACAGCTCTTTGGATT
G
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