EY735646

Overview
NameEY735646
Unique NameEY735646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735646_ssr245 microsatellite EY735646_ssr245:245..256. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig12454 contig Csv1_Contig12454:947..1809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY735646 vs. ExPASy Swiss-Prot
Match: Y3136_ARATH (Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana GN=At3g21360 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.794e-14
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 3 
Query:   36 EESVAIPWQKGDVLLIDNWAVLHARRSFNPPRRILASLCK 155
            EE VA+PWQ+GDVLLIDNWAVLH+RR F+PPRR+LASLCK
Sbjct:  291 EECVAVPWQRGDVLLIDNWAVLHSRRPFDPPRRVLASLCK 330
The following BLAST results are available for this feature:
BLAST of EY735646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3136_ARATH8.794e-1482.50Clavaminate synthase-like protein At3g21360 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-B12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735646 ID=EY735646; Name=EY735646; organism=Citrus sinensis; type=EST; length=863bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGAGGAAAGTGTTGCG
ATCCCTTGGCAGAAAGGTGATGTTTTGCTGATAGATAACTGGGCTGTGCT
ACATGCCCGAAGATCGTTTAATCCTCCTCGCCGTATATTAGCTTCACTTT
GCAAGTAAGAAAATGCACTTCCCTTGTGCGTGATTTCTCATGATCATATG
GCCACTGCTTGTACACTGTGGCTGTCATCTGATATGTACAAATTATGCAT
GCATGCAATATGTTCGTGGGTGGCCAAAGCGGCGTTGATGATGAAGCAGA
GAAAGTCACATTTGTTGAGATGGTCAACTCAGTAGACTTAGTCAACCTAA
TTAGGTAGTTGGATAAATAAGCTACTTAACTTAAGCATAAGTGGTAGCAT
GGTAGCATGTTTGTTTCCTATTATTTTGGCTTGCTGTTGCAGTTGTTTTG
CTACATTATTTGTCACATTTGTAAGGCTATAAATAGCCAAAAGCATCTGA
ATAATGGAGGACAGATGGTCGGCAACAGAGACCTTTCCGTTGCCGGGAAG
AGGGGGAGGGCGGGGGAGGGGGGGCGCTCTGAAGGATCAAGCGAGAGTGG
GCCGCCCATGCGACGGGCTGACTCTCCTGTGATTGGGTCGAAGGGCAAGG
CAGGGGGCGGCCTTTTTCCAGCGTCGACGGGGGGGCCGGCCGGGGGGGCG
CGGGAAGGGGGCCCCGCCGCAGCGCCGCCGGTAGCGCGACAGGTGCGTGT
AGAATCAAAAAGAGCACACAGCGTCGGGAGTGCGGTGTCTGGGCACGGGC
GCGCGAGCCCGGGCCGACCGGCGGGGGGGGGGGGGTGGGCGGAGGTGGGA
GGGGGGAGGGGCG
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