EY735624

Overview
NameEY735624
Unique NameEY735624
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735624 vs. ExPASy Swiss-Prot
Match: 4CLL7_ARATH (4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana GN=4CLL7 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.526e-49
Identity = 90/146 (61.64%), Postives = 121/146 (82.88%), Query Frame = 2
Query:  119 VEKSGYGRDGIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSDLSKQVRDSNPKLVITVPELWDRV*DLNLP 556
            +EKSGYGRDGIYRSL P LVLP DP+ S+V+FLFRNS+SY SKLA+ D+++ +SL+FSQ KS V +++H F  LGI K DVVLIFAPNS  FP+CFL V AIG + +TANP+YTV+++SKQ++DSNPK++I+V +L+D++   +LP
Sbjct:    1 MEKSGYGRDGIYRSLRPTLVLPKDPNTSLVSFLFRNSSSYPSKLAIADSDTGDSLTFSQLKSAVARLAHGFHRLGIRKNDVVLIFAPNSYQFPLCFLAVTAIGGVFTTANPLYTVNEVSKQIKDSNPKIIISVNQLFDKIKGFDLP 146          

HSP 2 Score: 22.3274 bits (46), Expect = 7.526e-49
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  555 PAVLLGAKDTV 587
            P VLLG+KDTV
Sbjct:  146 PVVLLGSKDTV 156          
BLAST of EY735624 vs. ExPASy Swiss-Prot
Match: 4CLL1_ORYSJ (4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica GN=4CLL1 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.438e-25
Identity = 60/149 (40.27%), Postives = 92/149 (61.74%), Query Frame = 2
Query:  116 SVEKSGYGRDGIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSD-ESLSFSQFKSIVIKVSHSFR-HLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSDLSKQVRDSNPKLVITVPELWDRV*DLNLP 556
            SV  +GYG DG+YRSL PP  + SDP  S+ + L R + +  S +AL DA +   +L+F++ +S V+  + +     G+   D VL+ APN + +P+CF  V A+GA+ +T NP YT  +++KQV D+  KLVIT+  L  ++  L LP
Sbjct:    5 SVPAAGYGADGVYRSLRPPAPVASDPGLSLTDLLLRRADACPSAVALADAAAGGRALTFAELRSAVLSTAVALSSRAGVRPGDAVLLLAPNCVLYPVCFFAVTALGAVGTTVNPDYTPREIAKQVSDARAKLVITISALVPKIAGLRLP 153          
BLAST of EY735624 vs. ExPASy Swiss-Prot
Match: 4CLL8_ARATH (4-coumarate--CoA ligase-like 8 OS=Arabidopsis thaliana GN=4CLL8 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20
Identity = 54/130 (41.54%), Postives = 80/130 (61.54%), Query Frame = 2
Query:  152 YRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSDLSKQVRDSNPKLVITVPELWDRV 538
            + S   PL LPS  S  +  F+  +S +Y  K A IDA +D  +SFS     V +V+    H +GI + DVVL+ +PN+I  PI  L V+++GA+ +TANP+ T S++ +Q+ DSNPKL  T PEL  ++
Sbjct:   24 FYSKRKPLALPSKESLDITTFI--SSQTYRGKTAFIDAATDHRISFSDLWMAVDRVADCLLHDVGIRRGDVVLVLSPNTISIPIVCLSVMSLGAVLTTANPLNTASEILRQIADSNPKLAFTTPELAPKI 151          
BLAST of EY735624 vs. ExPASy Swiss-Prot
Match: 4CLL5_ARATH (4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana GN=4CLL5 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.852e-19
Identity = 48/139 (34.53%), Postives = 87/139 (62.59%), Query Frame = 2
Query:  125 KSGY-GRDGIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSDLSKQVRDSNPKLVITVPELWDRV 538
            +SG+   +  + S   P+ LP +PS  +  F+  +S ++  ++A IDA++ ++L+F++    V  V+     +GI K  VVL+ +PNSI FP+  L V+++GAI +T NP+ T ++++KQ++DSNP L  T  +L  ++
Sbjct:    7 RSGFCNSNSTFYSKRTPIPLPPNPSLDVTTFI--SSQAHRGRIAFIDASTGQNLTFTELWRAVESVADCLSEIGIRKGHVVLLLSPNSILFPVVCLSVMSLGAIITTTNPLNTSNEIAKQIKDSNPVLAFTTSQLLPKI 143          
BLAST of EY735624 vs. ExPASy Swiss-Prot
Match: 4CLL2_ORYSJ (4-coumarate--CoA ligase-like 2 OS=Oryza sativa subsp. japonica GN=4CLL2 PE=2 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 3.793e-18
Identity = 50/123 (40.65%), Postives = 78/123 (63.41%), Query Frame = 2
Query:  146 GIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSDLSKQVRDSNPKLVI 511
            G+Y SL PPL LPSDPS S+V  LF +   +   L L+DA +  +LS + F+ +V  ++   R  L I +  +VL+  PNS+ FP+ FL V+A GA+A+T NP    ++++ ++RD+ P LV+
Sbjct:   21 GLYSSLHPPLPLPSDPSLSLVPHLFSHLPLHHHSL-LVDAPTAATLSCADFRRLVSSLAAGLRRRLHIARGSLVLLLLPNSLTFPVAFLAVLATGAVATTMNPSSAPAEIAARLRDTAPSLVL 142          
BLAST of EY735624 vs. ExPASy Swiss-Prot
Match: 4CLL3_ARATH (4-coumarate--CoA ligase-like 3 OS=Arabidopsis thaliana GN=4CLL3 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.459e-17
Identity = 52/141 (36.88%), Postives = 83/141 (58.87%), Query Frame = 2
Query:  110 LVSVEKSGYGR-DGIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSDLSKQVRDSNPKLVITVPEL 526
            L+   +SG+ + +  + S   PL LP +PS  +  F+  +S       A IDA++   L+FS    +V +V+    H +GI + DVVLI +PNSI+ P+  L V+++GA+ +TAN + T  ++SKQ+  SNP LV T  +L
Sbjct:    8 LIVDPRSGFCKSNSTFYSKRNPLCLPPNPSLDVTTFI--SSQPQRGTTAFIDASTGHRLTFSDLWRVVDRVADCLYHEVGIRRGDVVLILSPNSIYIPVVCLSVMSLGAVVTTANTLNTSGEISKQIAQSNPTLVFTTSQL 146          
BLAST of EY735624 vs. ExPASy Swiss-Prot
Match: 4CLL4_ARATH (4-coumarate--CoA ligase-like 4 OS=Arabidopsis thaliana GN=4CLL4 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.718e-16
Identity = 53/141 (37.59%), Postives = 83/141 (58.87%), Query Frame = 2
Query:  110 LVSVEKSGYGR-DGIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSDLSKQVRDSNPKLVITVPEL 526
            L+   +SG+ + +  + S   PL LP + S  +  F+  +S  +  K A IDA + + L+FS     V +V+    H +GI + DVVLI +PNSI  P+  L V+++GA+ +TAN + T  ++SKQ+ DSNP LV T  +L
Sbjct:    8 LIVDPRSGFCKSNSTFYSKRQPLSLPPNLSRDVTTFI--SSQPHRGKTAFIDAATGQCLTFSDLWRAVDRVADCLYHEVGIRRGDVVLILSPNSIFIPVVCLSVMSLGAVFTTANTLNTSGEISKQIADSNPTLVFTTRQL 146          
BLAST of EY735624 vs. ExPASy Swiss-Prot
Match: 4CLL4_ORYSJ (4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica GN=4CLL4 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.301e-15
Identity = 48/137 (35.04%), Postives = 82/137 (59.85%), Query Frame = 2
Query:  125 KSGY-GRDGIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQ-FKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSDLSKQVRDSNPKLVITVPEL 526
            +SGY      +RS    + LP+DP   +V+FL   S  +S  +AL+DA +   ++F++ ++++    S    H + + K  V LI +PNS+HFP+  L  +++GA+ +TANP+ T ++++KQV D+ P L  T  EL
Sbjct:   12 RSGYCAATRTFRSRRADVPLPADPEVDVVSFLA--SRRHSGVVALVDAATGRRITFTELWRAVAGAASALAAHPVSLRKGHVALILSPNSVHFPVAALAAMSLGAVLTTANPLNTPAEIAKQVADARPVLAFTTREL 146          
BLAST of EY735624 vs. ExPASy Swiss-Prot
Match: 4CL_VANPL (4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.005e-15
Identity = 46/135 (34.07%), Postives = 77/135 (57.04%), Query Frame = 2
Query:  140 RDGIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSDLSKQVRDSNPKLVITVPELWDRV*D 544
            +D I+RS  P + +P +    + ++ F N + +SS+  LI+  +DE  +++  + I  +V      LGI + D ++I  PNS  F   FLG   IG+I++ ANP +T +++ KQ + SN KL+IT     D+V D
Sbjct:   12 KDIIFRSKLPDIYIPKN--LPLHSYCFENISKFSSRPCLINGATDEIFTYADVELISRRVGSGLSKLGIKQGDTIMILLPNSPEFVFAFLGASFIGSISTMANPFFTSTEVIKQAKASNAKLIITQGCYVDKVKD 144          
BLAST of EY735624 vs. ExPASy Swiss-Prot
Match: 4CLL2_ARATH (4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana GN=4CLL2 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 3.005e-15
Identity = 50/135 (37.04%), Postives = 76/135 (56.30%), Query Frame = 2
Query:  125 KSGYGRD-GIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSDLSKQVRDSNPKLVITVPEL 526
            KSG+     I+ S   P+ LP +    + +F+   S  +  K   +DA +   LSF +    V +V+     LG+ K +VV+I +PNSI FPI  L V+++GAI +TANP+ T  ++SKQ+ DS P L  T  +L
Sbjct:   24 KSGFCESTSIFYSKREPMALPPNQFLDVTSFIA--SQPHRGKTVFVDAVTGRRLSFPELWLGVERVAGCLYALGVRKGNVVIILSPNSILFPIVSLSVMSLGAIITTANPINTSDEISKQIGDSRPVLAFTTCKL 156          
The following BLAST results are available for this feature:
BLAST of EY735624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
4CLL7_ARATH7.526e-4961.644-coumarate--CoA ligase-like 7 OS=Arabidopsis thal... [more]
4CLL1_ORYSJ1.438e-2540.274-coumarate--CoA ligase-like 1 OS=Oryza sativa sub... [more]
4CLL8_ARATH1.066e-2041.544-coumarate--CoA ligase-like 8 OS=Arabidopsis thal... [more]
4CLL5_ARATH5.852e-1934.534-coumarate--CoA ligase-like 5 OS=Arabidopsis thal... [more]
4CLL2_ORYSJ3.793e-1840.654-coumarate--CoA ligase-like 2 OS=Oryza sativa sub... [more]
4CLL3_ARATH2.459e-1736.884-coumarate--CoA ligase-like 3 OS=Arabidopsis thal... [more]
4CLL4_ARATH2.718e-1637.594-coumarate--CoA ligase-like 4 OS=Arabidopsis thal... [more]
4CLL4_ORYSJ2.301e-1535.044-coumarate--CoA ligase-like 4 OS=Oryza sativa sub... [more]
4CL_VANPL3.005e-1534.074-coumarate--CoA ligase OS=Vanilla planifolia GN=4... [more]
4CLL2_ARATH3.005e-1537.044-coumarate--CoA ligase-like 2 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-H10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735624 ID=EY735624; Name=EY735624; organism=Citrus sinensis; type=EST; length=914bp
ACCTGGTACGCATGCAGTGTACTGTGTCTGGAANTCCTGTGGTCGACCNA
CGCGTCCGGTCTAGCCCCGCCCCGAGCCACCTCATCCTTAATTCTCGTGT
CGTTATTGTTTAGTTTCAGTGGAGAAATCTGGTTATGGCCGTGATGGTAT
CTACAGATCTTTAACGCCACCTTTGGTTCTTCCCAGTGACCCCAGTTTTT
CTATGGTTAATTTTCTCTTTAGAAACTCTGCTTCTTATAGCTCCAAATTA
GCACTTATTGATGCTAATTCTGATGAATCTTTGTCTTTTTCCCAGTTCAA
ATCCATTGTGATCAAGGTTTCTCATAGCTTTCGCCATCTGGGCATTACCA
AAAAAGATGTTGTTTTGATTTTTGCTCCAAATTCAATTCATTTCCCTATT
TGCTTTCTTGGTGTCATTGCTATAGGCGCTATAGCATCAACTGCGAATCC
TGTTTACACGGTCTCTGATCTTTCAAAGCAAGTCAGGGATTCCAATCCGA
AACTTGTTATTACAGTCCCTGAATTATGGGACAGAGTGTAAGACTTGAAC
TTGCCCAGCTGTCCTTTTAGGTGCCAAAGATACGGTTCTTCTTCTGGTCT
TATATCAGGAGGCGCCAGTATCGTGTCTTGCCAGGACGTGATTGAGTTAT
CTGGCGAGTGTGGCGATATCCCAGATGTACTGTTAAGCAGACCCATGCTT
CGTTTCCGGTTGCTCTCCTGAGGGAAGAGCGCGGTCAGCGCGAGTTGCCG
TTGGAGGGTCAGGAGTTGCGGCGGGCTGCGCTTCGCTGGGGCCCATCCCT
CGAAGAACTGGTTGCTTGCCGAGCTCCGCCCCCGCACCCGAGCGGGGAAG
TAAGGCGGCGGTCGGAAGGGGGCTCTCCTTCCAATCTCGACGGGCGTCGC
CCTATCCGGCCGGG
back to top