EY735521

Overview
NameEY735521
Unique NameEY735521
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length986
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY735521 vs. ExPASy Swiss-Prot
Match: NOLO_BRAJA (Nodulation protein nolO OS=Bradyrhizobium japonicum GN=nolO PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.725e-11
Identity = 58/180 (32.22%), Postives = 85/180 (47.22%), Query Frame = -3 
Query:   88 EFKVLSRAPNGDPSNKDFLRLASLGKTAELVFTTDYAKVHRPAPATKRRARGFYFSPKLIEWLGPKREGDIADEPYIHYAASMQALFEKLALQMIDHYLGDILKDTG--KLAFAGGCALNVKLNQKIIARDDVKELFVQPASGDAGTAVGAAAYVSH--ARGVPVEKMEHVYLGPSYSNE 615
            E+KV+  AP GDP     L      +  EL+ +  Y +VH                P L+  +  +R+G    + +   +AS+Q   E++    + H+     K TG  +L  AGG A N  LN K++      ++FVQPA+ DAG A+GAA  VS    R  P E++  VY GP   NE
Sbjct:   74 EYKVMGLAPYGDPDRYREL----FAQFYELLDSGGY-RVHLDR-----------IGPALLRNIQVRRKGMPFTQQHRDVSASLQEALERIVFHTLRHHR----KATGMTRLCLAGGVAHNCTLNGKLLYSGLFDDIFVQPAAHDAGCALGAALMVSSELGRPAPRERLPDVYWGPDLGNE 233
The following BLAST results are available for this feature:
BLAST of EY735521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NOLO_BRAJA1.725e-1132.22Nodulation protein nolO OS=Bradyrhizobium japonicu... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-090-E08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735521 ID=EY735521; Name=EY735521; organism=Citrus sinensis; type=EST; length=986bp
CATGATCTTGGCGATGCGCTTGGGCATGTTTTCGATCTTGCGCCAGACCG
GCTTGCTCTCGTGCTTGGCGCACGCGGCGATCACGTCTTCATTGCTGTAA
GACGGGCCGAGATAGACGTGTTCCATCTTCTCAACCGGTACGCCACGGGC
GTGGGACACGTAGGCTGCCGCACCGACCGCGGTGCCGGCATCGCCGGACG
CCGGCTGTACAAACAGCTCCTTGACGTCGTCACGGGCAATGATCTTCTGG
TTCAGCTTGACGTTCAGTGCACAGCCGCCGGCGAAGGCCAGCTTGCCGGT
GTCTTTGAGGATGTCGCCCAGGTAATGGTCGATCATCTGCAACGCCAGCT
TCTCGAACAGTGCCTGCATGCTGGCCGCGTAGTGGATGTACGGCTCGTCG
GCGATATCGCCTTCGCGCTTCGGACCCAGCCACTCGATCAGCTTCGGCGA
GAAGTAGAAACCCCTTGCCCTTCTCTTTGTAGCGGGCGCAGGCCGATGAA
CTTTGGCGTAGTCGGTGGTGAATACCAACTCCGCCGTTTTTCCAAGGGAA
GCCAGGCGCAGAAAATCCTTATTGCTGGGATCGCCATTAGGGGCCCTGCT
CAGGACCTTGAACTCCAACGTTCAAGCATTTCTAAAAAATGGGAAACATT
GGTGAATACATGCCTTTCAAGGCCTCCTAGGGGGAAACCGGGAGTTAGCA
ATTCCAGGTATTTGGTGGACACTAATCTGTGTTGGATCTATTGATAGATT
AGAGGGGGGGGAGGTACAGAAACTTTACTGAAACCTAATCTAGATGAATC
TGGTAATAATATATTTTAGGAACATATAATTACGGTTTAATTGTAGAGAG
TGGGAAGAGTAATAGTTGAAGTCAGTTGATTTCAGAAAATATAGCTCAGA
ATGGTTATCTCATGTTTTTGTGTCTAAATCTCATGACATTTGATAAAGAA
CAAACTCCAATCACTACTTAATAGTAAATGAGCCAC
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