EY735508

Overview
NameEY735508
Unique NameEY735508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1050
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735508_ssr397 microsatellite EY735508_ssr397:397..408. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA1A_ORYSJ (Importin subunit alpha-1a OS=Oryza sativa subsp. japonica GN=Os01g0253300 PE=1 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 2.599e-61
Identity = 140/248 (56.45%), Postives = 168/248 (67.74%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSGNPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVP-FGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFYWAPFATCFQNVKF 759
            + +   ++E+TKVVIDHGAVPIFVKLL S  D++RE+A  ALGNVA DSP+ RDLVL+  AL+PLL  LN H  LSM R AT TLSN C G P+P FEQ RPALPALA+L+HSNDE+VLTDAC AL +L SD  NDKIQAVIEAGVCPRLVELL HPSPSVL  AL+TV     G          +   A+P   ++ + + +  IKK ACW I NI AG  + +I A I+AG    P     Q  +F
Sbjct:  141 TNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYL-SDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCI--IDHQALPCLLSLLTQNLKKSIKKEACWTISNITAG-NKDQIQAVINAGII-GPLVNLLQTAEF 383          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA_SOLLC (Importin subunit alpha OS=Solanum lycopersicum PE=2 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 2.059e-58
Identity = 132/250 (52.80%), Postives = 167/250 (66.80%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSGNPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSV---YN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFYWAPFATCFQNVKF 759
            + +   ++E+TKVVID+G+VPIF++LL+SP D++RE+A  ALGN+A DSP++RDLVL   AL+ LL   N  A LSM R AT TLSN C G P+P+FEQ + ALP L +L+HSNDE+VLTDAC AL +L SD  NDKIQAVIEAGVC RLVELL H SPSVL  AL+TV     G  I   V   ++ L C       + + +++  IKK ACW I NI AG  R +I   I+AG   AP     QN +F
Sbjct:  142 TNIASGTSENTKVVIDYGSVPIFIRLLSSPSDDVREQAVWALGNIAGDSPKYRDLVLGHGALVALLAQFNEQAKLSMLRNATWTLSNFCRGKPQPLFEQTKAALPTLGRLIHSNDEEVLTDACWALSYL-SDGTNDKIQAVIEAGVCSRLVELLLHSSPSVLIPALRTVGNIVTGDDIQTQVMIDHHALPCLV----NLLTQNYKKSIKKEACWTISNITAG-NRNQIQIVIEAGII-APLVYLLQNAEF 384          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA1_ARATH (Importin subunit alpha-1 OS=Arabidopsis thaliana GN=KAP1 PE=2 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 3.513e-58
Identity = 133/248 (53.63%), Postives = 167/248 (67.34%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSGNPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVP-FGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFYWAPFATCFQNVKF 759
            + +   +++ TKVVIDH AVPIFV+LLASP D++RE+A  ALGNVA DSPR RDLVL   AL+PLL  LN HA LSM R AT TLSN C G P+P F+QV+PALPAL +L+HS+DE+VLTDAC AL +L SD  NDKIQ VI+AGV P+LVELL H SPSVL  AL+TV     G  I       +   A+P    + + +H+  IKK ACW I NI AG  + +I   ++A    +P  +  QN +F
Sbjct:  141 TNIASGTSDHTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNVAGDSPRCRDLVLGCGALLPLLNQLNEHAKLSMLRNATWTLSNFCRGKPQPHFDQVKPALPALERLIHSDDEEVLTDACWALSYL-SDGTNDKIQTVIQAGVVPKLVELLLHHSPSVLIPALRTVGNIVTGDDIQTQCV--INSGALPCLANLLTQNHKKSIKKEACWTISNITAG-NKDQIQTVVEANLI-SPLVSLLQNAEF 383          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA1B_ORYSJ (Importin subunit alpha-1b OS=Oryza sativa subsp. japonica GN=Os05g0155500 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 7.324e-56
Identity = 132/248 (53.23%), Postives = 166/248 (66.94%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSGNPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVP-FGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFYWAPFATCFQNVKF 759
            + +   ++++TKVV++ GAVPIFVKLL+SP +++RE+A  ALGNVA DSP+ RDLVL+   L PLL  LN HA LSM R AT TLSN C G P+P FEQV+PAL AL +L+HS DE+VLTDAC AL +L SD  NDKIQAVIE+GV PRLVELL HPS SVL  AL+TV     G  +       +   A+P    + + +H+  IKK ACW I NI AG  R++I A I+A    AP     Q  +F
Sbjct:  147 TNIASGTSDNTKVVVESGAVPIFVKLLSSPSEDVREQAVWALGNVAGDSPKCRDLVLASGGLYPLLQQLNEHAKLSMLRNATWTLSNFCRGKPQPNFEQVKPALSALQRLIHSQDEEVLTDACWALSYL-SDGTNDKIQAVIESGVFPRLVELLMHPSASVLIPALRTVGNIVTGDDMQTQCV--IDHQALPCLLNLLTNNHKKSIKKEACWTISNITAG-NREQIQAVINANII-APLVHLLQTAEF 389          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA2_ARATH (Importin subunit alpha-2 OS=Arabidopsis thaliana GN=KAP2 PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 2.205e-52
Identity = 122/233 (52.36%), Postives = 156/233 (66.95%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSGNPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVP-FGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAG 714
            + +   ++E+T V+I+ GAVPIF++LL+S  +++RE+A  ALGNVA DSP+ RDLVLS  A+ PLL+  N +  LSM R AT TLSN C G P P FEQ +PALP L +LV S DE+VLTDAC AL +L SD  NDKIQAVIEAGV PRL++LLGH SPSVL  AL+T+     G  +   +   L   A+P    +   +++  IKK ACW I NI AG    +I A IDAG
Sbjct:  144 TNIASGTSENTNVIIESGAVPIFIQLLSSASEDVREQAVWALGNVAGDSPKCRDLVLSYGAMTPLLSQFNENTKLSMLRNATWTLSNFCRGKPPPAFEQTQPALPVLERLVQSMDEEVLTDACWALSYL-SDNSNDKIQAVIEAGVVPRLIQLLGHSSPSVLIPALRTIGNIVTGDDLQTQMV--LDQQALPCLLNLLKNNYKKSIKKEACWTISNITAGNA-DQIQAVIDAG 372          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMAB_DICDI (Importin subunit alpha-B OS=Dictyostelium discoideum GN=DDB_G0272318 PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 9.922e-45
Identity = 110/233 (47.21%), Postives = 149/233 (63.95%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHA--NLSMKRRATRTLSNLCSGNPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDA 711
            + +   + E T+VVI++GA+ +FV LL+SP D++RE+A  ALGN+A DS   RDLVLS  AL PLL+LL N A   +SM R AT TLSN C G P+P FE VR +LP LA+L++  DE+VL DAC AL +L SD  N++IQ VI+A VC ++VELLGHP+ +V T AL+T+     G      +   +   +     ++S    IR  K ACW I NI AG+ + +I   IDA
Sbjct:  136 TNIASGTPEQTRVVIENGAIQVFVLLLSSPHDDVREQAVWALGNIAGDSHYCRDLVLSHNALPPLLSLLQNPAAIKVSMVRNATWTLSNFCRGKPQPPFEIVRASLPVLAKLIYYQDEEVLIDACWALSYL-SDGSNERIQEVIDAKVCRKMVELLGHPTIAVQTPALRTIGNIVTGDDNQTQIVLSVQALSHLLNLLQSPKRAIR--KEACWTISNITAGD-KNQIQQVIDA 364          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA7_MOUSE (Importin subunit alpha-7 OS=Mus musculus GN=Kpna6 PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.751e-41
Identity = 108/235 (45.96%), Postives = 143/235 (60.85%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSG-NPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFY 720
            + +   +++ TK+VI+ GAVPIF++LL S  ++++E+A  ALGN+A DS   RD VL+   L PLLTLL     L+M R A   LSNLC G NP P F +V P LP L++L+ S+D  +L DAC AL +L SD  N+KIQAVI++GVC RLVELL H    V + AL+ V     G  I   V   L C+A+P         +  I+K ACW I NI AG  R +I A IDA  +
Sbjct:  150 TNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSLCRDYVLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYL-SDGPNEKIQAVIDSGVCRRLVELLMHNDYKVASPALRAVGNIVTGDDIQTQVI--LNCSALPCLLHLLSSSKESIRKEACWTISNITAG-NRAQIQAVIDANIF 380          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA7_BOVIN (Importin subunit alpha-7 OS=Bos taurus GN=KPNA6 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.751e-41
Identity = 108/235 (45.96%), Postives = 143/235 (60.85%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSG-NPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFY 720
            + +   +++ TK+VI+ GAVPIF++LL S  ++++E+A  ALGN+A DS   RD VL+   L PLLTLL     L+M R A   LSNLC G NP P F +V P LP L++L+ S+D  +L DAC AL +L SD  N+KIQAVI++GVC RLVELL H    V + AL+ V     G  I   V   L C+A+P         +  I+K ACW I NI AG  R +I A IDA  +
Sbjct:  150 TNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYL-SDGPNEKIQAVIDSGVCRRLVELLMHNDNKVASPALRAVGNIVTGDDIQTQVI--LNCSALPCLLHLLSSSKESIRKEACWTISNITAG-NRAQIQAVIDANIF 380          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA7_PONAB (Importin subunit alpha-7 OS=Pongo abelii GN=KPNA6 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.987e-41
Identity = 108/235 (45.96%), Postives = 143/235 (60.85%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSG-NPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFY 720
            + +   +++ TK+VI+ GAVPIF++LL S  ++++E+A  ALGN+A DS   RD VL+   L PLLTLL     L+M R A   LSNLC G NP P F +V P LP L++L+ S+D  +L DAC AL +L SD  N+KIQAVI++GVC RLVELL H    V + AL+ V     G  I   V   L C+A+P         +  I+K ACW I NI AG  R +I A IDA  +
Sbjct:  150 TNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYL-SDGPNEKIQAVIDSGVCRRLVELLMHNDYKVASPALRAVGNIVTGDDIQTQVI--LNCSALPCLLHLLSSPKESIRKEACWTISNITAG-NRAQIQAVIDANIF 380          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA7_HUMAN (Importin subunit alpha-7 OS=Homo sapiens GN=KPNA6 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.987e-41
Identity = 108/235 (45.96%), Postives = 143/235 (60.85%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSG-NPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFY 720
            + +   +++ TK+VI+ GAVPIF++LL S  ++++E+A  ALGN+A DS   RD VL+   L PLLTLL     L+M R A   LSNLC G NP P F +V P LP L++L+ S+D  +L DAC AL +L SD  N+KIQAVI++GVC RLVELL H    V + AL+ V     G  I   V   L C+A+P         +  I+K ACW I NI AG  R +I A IDA  +
Sbjct:  150 TNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYL-SDGPNEKIQAVIDSGVCRRLVELLMHNDYKVASPALRAVGNIVTGDDIQTQVI--LNCSALPCLLHLLSSPKESIRKEACWTISNITAG-NRAQIQAVIDANIF 380          
The following BLAST results are available for this feature:
BLAST of EY735508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
IMA1A_ORYSJ2.599e-6156.45Importin subunit alpha-1a OS=Oryza sativa subsp. j... [more]
IMA_SOLLC2.059e-5852.80Importin subunit alpha OS=Solanum lycopersicum PE=... [more]
IMA1_ARATH3.513e-5853.63Importin subunit alpha-1 OS=Arabidopsis thaliana G... [more]
IMA1B_ORYSJ7.324e-5653.23Importin subunit alpha-1b OS=Oryza sativa subsp. j... [more]
IMA2_ARATH2.205e-5252.36Importin subunit alpha-2 OS=Arabidopsis thaliana G... [more]
IMAB_DICDI9.922e-4547.21Importin subunit alpha-B OS=Dictyostelium discoide... [more]
IMA7_MOUSE1.751e-4145.96Importin subunit alpha-7 OS=Mus musculus GN=Kpna6 ... [more]
IMA7_BOVIN1.751e-4145.96Importin subunit alpha-7 OS=Bos taurus GN=KPNA6 PE... [more]
IMA7_PONAB2.987e-4145.96Importin subunit alpha-7 OS=Pongo abelii GN=KPNA6 ... [more]
IMA7_HUMAN2.987e-4145.96Importin subunit alpha-7 OS=Homo sapiens GN=KPNA6 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-090-C10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735508 ID=EY735508; Name=EY735508; organism=Citrus sinensis; type=EST; length=1050bp
ACCGCCGACGCGTCGGATTCCCGGGTCGACCCCGCGTCCGCGGAGGACAC
TAAGGTGGTGATTGACCACGGTGCTGTTCCAATATTTGTGAAACTACTTG
CTTCTCCAAGAGATAATATCCGGGAGAAGGCTGCTTCGGCATTGGGAAAT
GTTGCTATTGACTCGCCTAGATTCCGTGATCTTGTGCTTAGTGAAGAAGC
TCTAATTCCATTGTTAACACTGTTAAATAACCATGCAAACCTTTCAATGA
AGAGAAGAGCCACACGGACGTTGTCTAATTTATGCAGCGGCAATCCACGA
CCAATATTTGAACAGGTGAGACCAGCTCTTCCGGCGCTTGCGCAGCTTGT
TCATTCAAATGATGAACAGGTCTTGACTGATGCTTGCCGGGCACTCTTCT
TTCTTTCTAGTGATCGTAAGAATGACAAAATTCAAGCTGTGATTGAGGCA
GGTGTCTGTCCACGACTTGTTGAGCTCCTTGGTCATCCATCACCCTCAGT
GCTTACTGCTGCCCTGCAGACTGTTTACAAATATTGTGAGGGGAGATGAA
TTCCAGACTCAGTGTATAATTAACTGTGGTGCACTGCCGTACCTTTTGGG
GCTGTTGAATCCATGGATCATGAAATTCGCATTAAGAAATTTGCATGCTG
GATTATTGGCAATATTCCAGCTGGGGAAACAAGGAAAAAAATTCCGGCGG
GAATTGATGCTGGCTTTTATTGGGCCCCCTTTGCAACCTGCTTCCAAAAT
GTTAAATTTTGATATAAAGGGATGGGGCCCCCAGGGGCCATTTTCAAACG
GCCCCCAGGGTTGAACACTCCTGAACCAAATTCGGTTATCTCCTGGGAAA
AAGGGGGGGGGAAAAAAACCATGTGGGGGGATCCCTTTTTTTTGGGGCTC
AATTCCAAAAAAATCGCCTCGGGTTTTGGCTTAAAAGAGGGGTTTAAAAA
AAAATTTTTTTGAAGAGGGCGGGGGGGAAAGCGCATTGAAAAAAAAAAAA
ATTTGGGCAACCCCCCTCACCCTTATGGGTGAAAAAGATTGTTTTTGCAC
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