EY735479
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: PABP2_MOUSE (Polyadenylate-binding protein 2 OS=Mus musculus GN=Pabpn1 PE=2 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 1.163e-23 Identity = 67/153 (43.79%), Postives = 87/153 (56.86%), Query Frame = 2 Query: 194 QAKVEKEMGAAQDPAN---VAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKVFT*EGQCPWYETSIVQGVSIPYLGYRGRRPLCTSLFSISL*GYGKVPR 640 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+KV P T+ P YR R S S G+ PR Sbjct: 136 QNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTT---DRGFPRSRYRARTTNYNSSRSRFYSGFNSRPR 285
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: PABP2_HUMAN (Polyadenylate-binding protein 2 OS=Homo sapiens GN=PABPN1 PE=1 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 1.163e-23 Identity = 67/153 (43.79%), Postives = 87/153 (56.86%), Query Frame = 2 Query: 194 QAKVEKEMGAAQDPAN---VAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKVFT*EGQCPWYETSIVQGVSIPYLGYRGRRPLCTSLFSISL*GYGKVPR 640 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+KV P T+ P YR R S S G+ PR Sbjct: 140 QNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTT---DRGFPRARYRARTTNYNSSRSRFYSGFNSRPR 289
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: PABP2_BOVIN (Polyadenylate-binding protein 2 OS=Bos taurus GN=PABPN1 PE=1 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 1.163e-23 Identity = 67/153 (43.79%), Postives = 87/153 (56.86%), Query Frame = 2 Query: 194 QAKVEKEMGAAQDPAN---VAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKVFT*EGQCPWYETSIVQGVSIPYLGYRGRRPLCTSLFSISL*GYGKVPR 640 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+KV P T+ P YR R S S G+ PR Sbjct: 140 QNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTT---DRGFPRARYRARTTNYNSSRSRFYSGFNSRPR 289
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: PAB2A_XENLA (Polyadenylate-binding protein 2-A OS=Xenopus laevis GN=pabpn1-A PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.590e-23 Identity = 56/105 (53.33%), Postives = 74/105 (70.48%), Query Frame = 2 Query: 194 QAKVEKEMGAAQDPAN---VAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKV 496 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+KV Sbjct: 131 QNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSLALDESLFRGRQIKV 235
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: PAB2B_XENLA (Polyadenylate-binding protein 2-B OS=Xenopus laevis GN=pabpn1-B PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.383e-23 Identity = 56/105 (53.33%), Postives = 74/105 (70.48%), Query Frame = 2 Query: 194 QAKVEKEMGAAQDPAN---VAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKV 496 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+KV Sbjct: 130 QNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKV 234
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: PABP2_XENTR (Polyadenylate-binding protein 2 OS=Xenopus tropicalis GN=pabpn1 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 9.842e-23 Identity = 55/105 (52.38%), Postives = 74/105 (70.48%), Query Frame = 2 Query: 194 QAKVEKEMGAAQDPAN---VAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKV 496 Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DK+ G PKGFAY+EF + ++V+ +L L+ES GRQ+KV Sbjct: 131 QNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKV 235
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: PAB2_SCHPO (Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe GN=pab2 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.118e-21 Identity = 53/79 (67.09%), Postives = 60/79 (75.95%), Query Frame = 2 Query: 263 KEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKV 496 KE D++SV+VGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF G PKGFAY+EF E V AL LN S LH R LKV Sbjct: 49 KESIDAQSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSMLHERPLKV 127 HSP 2 Score: 21.557 bits (44), Expect = 1.118e-21 Identity = 8/9 (88.89%), Postives = 8/9 (88.89%), Query Frame = 3 Query: 501 PKRDNVPGM 527 PKR NVPGM Sbjct: 129 PKRTNVPGM 137
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: PABP2_DROPS (Polyadenylate-binding protein 2 OS=Drosophila pseudoobscura pseudoobscura GN=Pabp2 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.856e-21 Identity = 62/142 (43.66%), Postives = 85/142 (59.86%), Query Frame = 2 Query: 194 QAKVEKEM--GAAQDPANVAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKVFT*EGQCPWYETS--IVQGVSIPYLGYRGRRPLCTSLF 604 Q++V+K+M G+ A V + K+E D+RSV+VGNVDY + EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NE+ GRQ+KV + P T+ +G S G R R C S F Sbjct: 65 QSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARG-SFRGRGARASRACCHSTF 205
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: PABP2_DROME (Polyadenylate-binding protein 2 OS=Drosophila melanogaster GN=Pabp2 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.424e-21 Identity = 62/142 (43.66%), Postives = 85/142 (59.86%), Query Frame = 2 Query: 194 QAKVEKEM--GAAQDPANVAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKVFT*EGQCPWYETS--IVQGVSIPYLGYRGRRPLCTSLF 604 Q++V+K+M G+ A V + K+E D+RSV+VGNVDY + EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NE+ GRQ+KV + P T+ +G S G R R C S F Sbjct: 65 QSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARG-SFRGRGARVSRACCHSTF 205
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: EPA2B_XENLA (Embryonic polyadenylate-binding protein 2-B OS=Xenopus laevis GN=epabp2-B PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.440e-20 Identity = 42/79 (53.16%), Postives = 60/79 (75.95%), Query Frame = 2 Query: 263 KEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKV 496 K+E D RSV+VGNVDY T ++++ HF SCG++NR+TIL DKF G PKG+AY+EF E ++V A+ ++E+ GR +KV Sbjct: 87 KKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVFRGRTIKV 165 HSP 2 Score: 25.0238 bits (53), Expect = 7.440e-20 Identity = 15/47 (31.91%), Postives = 19/47 (40.43%), Query Frame = 3 Query: 492 RFLPKRDNVPGMKPVSSKAFQSLTWGTEGGGPYVPPYFLFPFRDMGR 632 + LPKR N+PG+ F+ G G PFR GR Sbjct: 164 KVLPKRTNMPGISSTDRGGFRGRPRGNRGNYQRGQRPRGRPFRGRGR 210 The following BLAST results are available for this feature:
BLAST of EY735479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735479 ID=EY735479; Name=EY735479; organism=Citrus sinensis; type=EST; length=993bpback to top |