EY735477

Overview
NameEY735477
Unique NameEY735477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735477 vs. ExPASy Swiss-Prot
Match: RSTB_ECOLI (Sensor protein rstB OS=Escherichia coli (strain K12) GN=rstB PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 9.890e-16
Identity = 50/131 (38.17%), Postives = 74/131 (56.49%), Query Frame = 1 
Query:   85 RDMDALRNAALRMGQGELSMRVHLSRISGIRHVGESFNTMAERIAALVDNQRSLTNAVSHELRTPLARLSFEVDQLDRGGLPARHGRVLRDMRADISELESMVAELLVNARLERATEETVQLETVDTRDWM 477
            +DM  L  AA R G G L+ R+H    S    +G +FN MA+ I AL+ +++ L + ++HELRTPL RL + ++  D   L A   + L     DIS+LE+++ ELL  ARL+R   E + L   D   W+
Sbjct:  162 QDMLKLEAAAQRFGDGHLNERIHFDEGSSFERLGVAFNQMADNINALIASKKQLIDGIAHELRTPLVRLRYRLEMSD--NLSAAESQAL---NRDISQLEALIEELLTYARLDRPQNE-LHLSEPDLPLWL 286
The following BLAST results are available for this feature:
BLAST of EY735477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RSTB_ECOLI9.890e-1638.17Sensor protein rstB OS=Escherichia coli (strain K1... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-109-G08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735477 ID=EY735477; Name=EY735477; organism=Citrus sinensis; type=EST; length=889bp
ACCTTGCTGACCTGGGGCGTCTGGGTGTTCCCGCTGTTCATGATGGCGAT
GAGCCTGCTGGCGCTGTGGGCGCTGCCGATGTGGCGCGACATGGACGCGC
TGCGCAACGCCGCGCTGCGCATGGGCCAGGGCGAATTGAGCATGCGCGTG
CACCTGTCGCGTATTTCGGGCATCCGCCACGTCGGCGAGAGTTTCAACAC
CATGGCCGAGCGGATCGCCGCGTTGGTCGATAACCAGCGCAGCCTGACCA
ACGCCGTCTCGCACGAGCTGCGCACGCCGCTGGCGCGGCTGTCGTTCGAG
GTGGACCAGCTGGACCGCGGCGGCCTGCCGGCCCGCCATGGCCGGGTGCT
GCGCGACATGCGCGCGGACATCTCCGAGCTGGAAAGCATGGTGGCGGAAC
TGCTGGTGAACGCCCGGCTGGAACGGGCCACCGAGGAAACCGTGCAGCTC
GAAACGGTGGACACGCGCGACTGGATGGGCGAGGCGCCTGGCGCAGGTGG
CGCACCAAGACGCGACACGCAATGTGAAATGCGCGGGGGGAGCCAGGAAC
ACACCGCCATACCTGCGGAAAAATCCGCACTTCATGAAACCAGCTTCTGC
CAAAACAGGTGTACAAAGACAAAGAAATTAACAAGAGAATGCATTATAAT
AAAAAAAATTTTATTAAAATATAGATAAAAAAAATAAGATAGATATTATA
TTAGATTAAACTAAAATAATAAAATAATCGATGCGATTATGACAAATTAA
TGAATGATACAGACATAAAGGAGAGGAATTAAAAAGTGAATAATAACTAC
ATGCGAACAAGGAAATCTCTTGATATGAATAATAATCGTATAACTACACA
TAAAAACGCAAAATGCGACTTACTAAAGTATAGCGATGC
back to top