EY735467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735467 vs. ExPASy Swiss-Prot
Match: PRP8_MOUSE (Pre-mRNA-processing-splicing factor 8 OS=Mus musculus GN=Prpf8 PE=1 SV=2) HSP 1 Score: 291.582 bits (745), Expect = 5.010e-78 Identity = 134/203 (66.01%), Postives = 163/203 (80.30%), Query Frame = 3 Query: 3 YEQAAFGSKQIVRERAISATYLCLRVNLIYVNSEDIRETGYTYIMPKNILKRFICIAHLRTRISGYL*GISPPDNPQVKEIRCIALPRRWGTHHQVRLPSALPEHDFLNDLEPLGWMRTAPDELPQLSPHDLSSQARILDDNNQWDGEKCINLTCSSPPGSCSLTAYKLTPSGYEWGRVNKDTGSNPPGYLPTHYEKVQMLLS 611 YE F SK R RAISA L LR N IYV+S+DI+ETGYTYI+PKN+LK+FICI+ LR +I+GYL G+SPPDNPQVKEIRCI + +WGTH V LPS LP+H++L ++EPLGW+ T P+E PQLSP D+++ A+I+ DN WDGEK I +TCS PGSC+LTAYKLTPSGYEWGR N D G+NP GYLP+HYE+VQMLLS Sbjct: 2062 YETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPSQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLS 2264
BLAST of EY735467 vs. ExPASy Swiss-Prot
Match: PRP8_HUMAN (Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens GN=PRPF8 PE=1 SV=2) HSP 1 Score: 290.041 bits (741), Expect = 1.458e-77 Identity = 133/203 (65.52%), Postives = 162/203 (79.80%), Query Frame = 3 Query: 3 YEQAAFGSKQIVRERAISATYLCLRVNLIYVNSEDIRETGYTYIMPKNILKRFICIAHLRTRISGYL*GISPPDNPQVKEIRCIALPRRWGTHHQVRLPSALPEHDFLNDLEPLGWMRTAPDELPQLSPHDLSSQARILDDNNQWDGEKCINLTCSSPPGSCSLTAYKLTPSGYEWGRVNKDTGSNPPGYLPTHYEKVQMLLS 611 YE F SK R RAISA L LR N IYV+S+DI+ETGYTYI+PKN+LK+FICI+ LR +I+GYL G+SPPDNPQVKEIRCI + +WGTH V LP LP+H++L ++EPLGW+ T P+E PQLSP D+++ A+I+ DN WDGEK I +TCS PGSC+LTAYKLTPSGYEWGR N D G+NP GYLP+HYE+VQMLLS Sbjct: 2062 YETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLS 2264
BLAST of EY735467 vs. ExPASy Swiss-Prot
Match: PRP8_CAEEL (Pre-mRNA-splicing factor 8 homolog OS=Caenorhabditis elegans GN=prp-8 PE=1 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 3.591e-76 Identity = 132/203 (65.02%), Postives = 163/203 (80.30%), Query Frame = 3 Query: 3 YEQAAFGSKQIVRERAISATYLCLRVNLIYVNSEDIRETGYTYIMPKNILKRFICIAHLRTRISGYL*GISPPDNPQVKEIRCIALPRRWGTHHQVRLPSALPEHDFLNDLEPLGWMRTAPDELPQLSPHDLSSQARILDDNNQWDGEKCINLTCSSPPGSCSLTAYKLTPSGYEWGRVNKDTGSNPPGYLPTHYEKVQMLLS 611 YE A+F S+ R RAIS+T L LR IYVNS+D+++TGYTYI+PKNILK+FI I+ LRT+I+G++ G+SPPDNPQVKEIRCI L + G+H QV LP+ LP+H+ L D EPLGWM T P+ELPQLSP D+++ A++L DN WDGEK + +TCS PGS SLTAYKLTPSGYEWG+ N D G+NP GY+PTHYEKVQMLLS Sbjct: 2055 YETASFASRTEWRVRAISSTNLHLRTQHIYVNSDDVKDTGYTYILPKNILKKFITISDLRTQIAGFMYGVSPPDNPQVKEIRCIVLVPQTGSHQQVNLPTQLPDHELLRDFEPLGWMHTQPNELPQLSPQDVTTHAKLLTDNISWDGEKTVMITCSFTPGSVSLTAYKLTPSGYEWGKANTDKGNNPKGYMPTHYEKVQMLLS 2257
BLAST of EY735467 vs. ExPASy Swiss-Prot
Match: PRP8_DICDI (Pre-mRNA-processing-splicing factor 8 homolog OS=Dictyostelium discoideum GN=prpf8 PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 2.464e-64 Identity = 123/204 (60.29%), Postives = 150/204 (73.53%), Query Frame = 3 Query: 3 YEQAAFGSKQIVRERAISATYLCLRVNLIYVNSEDIRETG-YTYIMPKNILKRFICIAHLRTRISGYL*GISPPDNPQVKEIRCIALPRRWGTHHQVRLPSALPEHDFLNDLEPLGWMRTAPDELPQLSPHDLSSQARILDDNNQWDGEKCINLTCSSPPGSCSLTAYKLTPSGYEWGRVNKDTGSNPPGYLPTHYEKVQMLLS 611 +EQ F SK R RAISAT L LR N IYVNS++ +ETG +TY+ PKNILK+FI IA LRT+I GY GISPPDNP VKEIRCI +P +WGT V +P+ LPEH++L DLEPLGW+ T P ELPQLSP D+ + ++I+ DN WDGEK + ++ S C+LTAY LTPSG+EWG+ NKD+ N GY P YEKVQMLLS Sbjct: 2051 HEQKVFSSKTDWRVRAISATNLHLRTNQIYVNSDNAKETGGFTYVFPKNILKKFITIADLRTQIMGYCYGISPPDNPSVKEIRCIVMPPQWGTPVHVTVPNQLPEHEYLKDLEPLGWIHTQPTELPQLSPQDVITHSKIMSDNKSWDGEKTVIISV-SVAWPCTLTAYHLTPSGFEWGKNNKDS-LNYQGYQPQFYEKVQMLLS 2252 HSP 2 Score: 23.0978 bits (48), Expect = 2.464e-64 Identity = 12/26 (46.15%), Postives = 14/26 (53.85%), Query Frame = 1 Query: 613 DRFLGFLLVPEHRPRKIIKFWGSGNY 690 DRFLGF +VP+ GS NY Sbjct: 2253 DRFLGFYMVPDR---------GSWNY 2269
BLAST of EY735467 vs. ExPASy Swiss-Prot
Match: SPP42_SCHPO (Pre-mRNA-splicing factor spp42 OS=Schizosaccharomyces pombe GN=spp42 PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.846e-47 Identity = 106/209 (50.72%), Postives = 137/209 (65.55%), Query Frame = 3 Query: 3 YEQAAFGSKQIVRERAISATYLCLRVNLIYVNSEDIRET-GYTYIMPKNILKRFICIAHLRTRISGYL*GISPPDNPQVKEIRCIALPRRWGTHHQVRLPSALPEHD----FLNDLEPLGWMRTAPDELPQLSPHDLSSQARILDDNNQWDGEKCINLTCSSPPGSCSLTAYKLTPSGYEWGRVNKDTGSNPP-GYLPTHYEKVQMLLS 611 YE F SK R RAIS+ L LR IYVNS++I ET YTYI+P+N+L++F+ I+ LRT+++GY+ G SP DNPQ+KEIRCIAL + G+ V+LPS LP HD L DLEPLGW+ T ELP LS D+++ A+IL + +WD K + LT S PGS SL AY ++ G EWG N D S+ GY P+ EK Q+LLS Sbjct: 2086 YENEKFSSKTEWRNRAISSISLPLRTKNIYVNSDNISETFPYTYILPQNLLRKFVTISDLRTQVAGYMYGKSPSDNPQIKEIRCIALVPQLGSIRNVQLPSKLP-HDLQPSILEDLEPLGWIHTQSSELPYLSSVDVTTHAKILSSHPEWD-TKAVTLTVSYIPGSISLAAYTVSKEGIEWGSKNMDINSDEAIGYEPSMAEKCQLLLS 2292 HSP 2 Score: 20.4014 bits (41), Expect = 7.846e-47 Identity = 8/11 (72.73%), Postives = 8/11 (72.73%), Query Frame = 1 Query: 613 DRFLGFLLVPE 645 DR GF LVPE Sbjct: 2293 DRIQGFFLVPE 2303
BLAST of EY735467 vs. ExPASy Swiss-Prot
Match: PRP8_YEAST (Pre-mRNA-splicing factor 8 OS=Saccharomyces cerevisiae GN=PRP8 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.521e-29 Identity = 76/207 (36.71%), Postives = 123/207 (59.42%), Query Frame = 3 Query: 3 YEQAAFGSKQIVRERAISATYLCLRVNLIYVNSEDIRETGYTYIMPKNILKRFICIAHLRTRISGYL*GISPPDNPQVKEIRCIALPRRWGTHHQVRLPSALPEHDFLND---LEPLGWMRTAPDELPQLSPHDLSSQARILDDNNQWDGEKCINLTCSSPPGSCSLTAYKLTPSGYEWGRVNKD-TGSNPPGYLPTHYEKVQMLLS 611 YE F SK R+ AI+ T L LR+ IYV+++D E Y++PKN+LK+FI I+ ++ +++ ++ G+S D+P+VKEI+ + L + G V++ S +P+ L D LE LGW+ T +EL ++ ++++ +++ D + CI+++ S PGS SL+AY LT GY+WG NKD G+ PT Q+LLS Sbjct: 2141 YESQTFSSKNEWRKSAIANTLLYLRLKNIYVSADDFVEEQNVYVLPKNLLKKFIEISDVKIQVAAFIYGMSAKDHPKVKEIKTVVLVPQLGHVGSVQI-SNIPDIGDLPDTEGLELLGWIHTQTEELKFMAASEVATHSKLFADKKR----DCIDISIFSTPGSVSLSAYNLTDEGYQWGEENKDIMNVLSEGFEPTFSTHAQLLLS 2342 The following BLAST results are available for this feature:
BLAST of EY735467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735467 ID=EY735467; Name=EY735467; organism=Citrus sinensis; type=EST; length=1026bpback to top |