EY735451

Overview
NameEY735451
Unique NameEY735451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1054
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735451_ssr142 microsatellite EY735451_ssr142:142..155. BLAST: Citrus ESTs to Prunus persica proteins V1
EY735451_ssr141 microsatellite EY735451_ssr141:141..152. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig12265 contig Csv1_Contig12265:14..1067. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735451 vs. ExPASy Swiss-Prot
Match: PMA4_ARATH (ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.136e-31
Identity = 60/138 (43.48%), Postives = 66/138 (47.83%), Query Frame = 3
Query:    3 YAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGLYXXXXXXXXXXXMSPH*PPKMWLVLCMKNLLLYPGSMCRVCFVFILNRWFLVCSSFKIPELPGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLA 416
            YAVSITIRIVLGFMLLALIWQFDF                                PP M L++ + N                                 GTIMTISKDRVKPSPLPDSWKL+EIF TGV+ G Y+A
Sbjct:  656 YAVSITIRIVLGFMLLALIWQFDF--------------------------------PPFMVLIIAILN--------------------------------DGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMA 729          

HSP 2 Score: 55.0694 bits (131), Expect = 1.136e-31
Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query:  418 MMTVIFFWAAYRTDFFPRTFGVSSLHEKGYK*LEKALPQQYTLQVSTIYQ 567
            MMTVIFFW +Y+TDFFPRTFGV++L +  +    K     Y LQVS I Q
Sbjct:  730 MMTVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRKLASAIY-LQVSIISQ 778          

HSP 3 Score: 28.1054 bits (61), Expect = 1.136e-31
Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 2
Query:  566 RALIFLTRARSWSF 607
            +ALIF+TR+RSWSF
Sbjct:  778 QALIFVTRSRSWSF 791          
BLAST of EY735451 vs. ExPASy Swiss-Prot
Match: PMA7_ARATH (ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=AHA7 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.153e-25
Identity = 56/138 (40.58%), Postives = 62/138 (44.93%), Query Frame = 3
Query:    3 YAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGLYXXXXXXXXXXXMSPH*PPKMWLVLCMKNLLLYPGSMCRVCFVFILNRWFLVCSSFKIPELPGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLA 416
            YAVSITIRIV+GFMLL + W+FDF                                PP M LV+ + N                                 GTIMTISKDRVKPSP PD WKL EIF TGV+LG YLA
Sbjct:  648 YAVSITIRIVMGFMLLCVFWEFDF--------------------------------PPFMVLVIAILN--------------------------------DGTIMTISKDRVKPSPTPDCWKLKEIFATGVVLGAYLA 721          

HSP 2 Score: 41.2022 bits (95), Expect = 1.153e-25
Identity = 23/58 (39.66%), Postives = 32/58 (55.17%), Query Frame = 1
Query:  418 MMTVIFFWAAYRTDFFPRTFGVSSLHEKGYK*LEKALPQQYT--------LQVSTIYQ 567
            +MTV+FFWAAY T+FF   F V + ++  +K  +K +             LQVSTI Q
Sbjct:  722 IMTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQMASAVYLQVSTISQ 779          

HSP 3 Score: 29.6462 bits (65), Expect = 1.153e-25
Identity = 18/44 (40.91%), Postives = 28/44 (63.64%), Query Frame = 2
Query:  566 RALIFLTRARSWSFC*PSWAWLLVLGF---RLWSN*LQFLICWP 688
            +ALIF+TR+RSWSF      +LLV+ F   +L ++ +  +  WP
Sbjct:  779 QALIFVTRSRSWSFV-ERPGFLLVIAFLIAQLVASVISAMANWP 821          
BLAST of EY735451 vs. ExPASy Swiss-Prot
Match: PMA3_NICPL (Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.660e-24
Identity = 75/180 (41.67%), Postives = 83/180 (46.11%), Query Frame = 3
Query:    3 YAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGLYXXXXXXXXXXXMSPH*PPKMWLVLCMKNLLLYPGSMCRVCFVFILNRWFLVCSSFKIPELPGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLANDDSDFLLGCVPDRFLPTYIWCFESS*KRI*MTGKSLASAIY 542
            YAVSITIRIVLGFMLLALIWQFDF                                PP M L++ + N                                 GTIMTISKDRVKPSPLPDSWKLAEIFTTGV+LGGYLA     F        F P  ++   +  K      + LASAIY
Sbjct:  652 YAVSITIRIVLGFMLLALIWQFDF--------------------------------PPFMVLIIAILN--------------------------------DGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGGYLAMMTVIFFWAAYKTNFFPR-VFGVSTLEKTATDDFRKLASAIY 766          

HSP 2 Score: 28.1054 bits (61), Expect = 2.660e-24
Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 2
Query:  566 RALIFLTRARSWSF 607
            +ALIF+TR+RSWSF
Sbjct:  774 QALIFVTRSRSWSF 787          
BLAST of EY735451 vs. ExPASy Swiss-Prot
Match: PMA1_NICPL (Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.660e-24
Identity = 73/180 (40.56%), Postives = 84/180 (46.67%), Query Frame = 3
Query:    3 YAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGLYXXXXXXXXXXXMSPH*PPKMWLVLCMKNLLLYPGSMCRVCFVFILNRWFLVCSSFKIPELPGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLANDDSDFLLGCVPDRFLPTYIWCFESS*KRI*MTGKSLASAIY 542
            YAVSITIRIVLGFMLLALIW+FDF                                PP M L++ + N                                 GTIMTISKDRVKPSPLPDSWKLAEIFTTG++LGGYLA     F        F P +++   +  K      + LASAIY
Sbjct:  653 YAVSITIRIVLGFMLLALIWKFDF--------------------------------PPFMVLIIAILN--------------------------------DGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGGYLAMMTVIFFWAAYKTNFFP-HVFGVSTLEKTATDDFRKLASAIY 767          

HSP 2 Score: 28.8758 bits (63), Expect = 2.660e-24
Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 2
Query:  566 RALIFLTRARSWSFC*PSWAWLLVLGF 646
            +ALIF+TR+RSWSF      +LLV+ F
Sbjct:  775 QALIFVTRSRSWSFV-ERPGFLLVIAF 800          
BLAST of EY735451 vs. ExPASy Swiss-Prot
Match: PMA1_SOLLC (Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.860e-24
Identity = 75/180 (41.67%), Postives = 83/180 (46.11%), Query Frame = 3
Query:    3 YAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGLYXXXXXXXXXXXMSPH*PPKMWLVLCMKNLLLYPGSMCRVCFVFILNRWFLVCSSFKIPELPGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLANDDSDFLLGCVPDRFLPTYIWCFESS*KRI*MTGKSLASAIY 542
            YAVSITIRIVLGFMLLALIW+FDF                                PP M L++ + N                                 GTIMTISKDRVKPSPLPDSWKLAEIFTTGV+LGGYLA     F        F P  I+   +  K      + LASAIY
Sbjct:  652 YAVSITIRIVLGFMLLALIWKFDF--------------------------------PPFMVLIIAILN--------------------------------DGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGGYLAMMTVIFFWAAYKTNFFPR-IFGVSTLEKTATDDFRKLASAIY 766          

HSP 2 Score: 28.1054 bits (61), Expect = 5.860e-24
Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 2
Query:  566 RALIFLTRARSWSF 607
            +ALIF+TR+RSWSF
Sbjct:  774 QALIFVTRSRSWSF 787          
BLAST of EY735451 vs. ExPASy Swiss-Prot
Match: PMA2_SOLLC (Plasma membrane ATPase 2 (Fragment) OS=Solanum lycopersicum GN=LHA2 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.297e-23
Identity = 67/155 (43.23%), Postives = 73/155 (47.10%), Query Frame = 3
Query:    3 YAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGLYXXXXXXXXXXXMSPH*PPKMWLVLCMKNLLLYPGSMCRVCFVFILNRWFLVCSSFKIPELPGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLANDDSDFLLGCVPDRFLP 467
            YAVSITIRIVLGFMLLALIW+FDF                                PP M L++ + N                                 GTIMTISKDRVKPSPLPDSWKLAEIFTTGV+LGGYLA     F       +F P
Sbjct:  400 YAVSITIRIVLGFMLLALIWKFDF--------------------------------PPFMVLIIAILN--------------------------------DGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGGYLAMMTVIFFWAAYETQFFP 490          

HSP 2 Score: 28.1054 bits (61), Expect = 1.297e-23
Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 2
Query:  566 RALIFLTRARSWSF 607
            +ALIF+TR+RSWSF
Sbjct:  522 QALIFVTRSRSWSF 535          
BLAST of EY735451 vs. ExPASy Swiss-Prot
Match: PMA2_ARATH (ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.620e-23
Identity = 44/80 (55.00%), Postives = 52/80 (65.00%), Query Frame = 3
Query:  198 MKNLLLYPGSMC-RVCFVFILNR--WFLVCSSFKIPELP----GTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLA 416
            MKN  +Y  S+  R+ F F+L    W    S+F +  +     GTIMTISKDRVKPSP PDSWKL EIF TGV+LGGY A
Sbjct:  642 MKNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQA 721          

HSP 2 Score: 46.2098 bits (108), Expect = 1.620e-23
Identity = 25/50 (50.00%), Postives = 32/50 (64.00%), Query Frame = 1
Query:  418 MMTVIFFWAAYRTDFFPRTFGVSSLHEKGYK*LEKALPQQYTLQVSTIYQ 567
            +MTVIFFWAA++TDFF  TFGV S+ +  ++     L     LQVS I Q
Sbjct:  722 IMTVIFFWAAHKTDFFSDTFGVRSIRDNNHE-----LMGAVYLQVSIISQ 766          

HSP 3 Score: 28.4906 bits (62), Expect = 1.620e-23
Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 2
Query:  566 RALIFLTRARSWSFC*PSWAWLLV 637
            +ALIF+TR+RSWSF     A L++
Sbjct:  766 QALIFVTRSRSWSFVERPGALLMI 789          

HSP 4 Score: 68.5514 bits (166), Expect = 7.177e-11
Identity = 33/38 (86.84%), Postives = 35/38 (92.11%), Query Frame = 3
Query:    3 YAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDG 116
            YAVSITIRIV GFML+ALIW+FDF  FMVLIIAILNDG
Sbjct:  648 YAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDG 685          
BLAST of EY735451 vs. ExPASy Swiss-Prot
Match: PMA4_NICPL (Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.749e-22
Identity = 44/80 (55.00%), Postives = 53/80 (66.25%), Query Frame = 3
Query:  198 MKNLLLYPGSMC-RVCF--VFILNRWFLVCSSFKIPELP----GTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLA 416
            MKN  +Y  S+  R+ F  +FI   W    S+F +  +     GTIMTISKDRVKPSP+PDSWKL EIF TGV+LGGY A
Sbjct:  645 MKNYTIYAVSITIRIVFGFMFIALIWKYDFSAFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVVLGGYQA 724          

HSP 2 Score: 40.4318 bits (93), Expect = 4.749e-22
Identity = 22/50 (44.00%), Postives = 28/50 (56.00%), Query Frame = 1
Query:  418 MMTVIFFWAAYRTDFFPRTFGVSSLHEKGYK*LEKALPQQYTLQVSTIYQ 567
            +MTV+FFWA + TDFF   FGV SL        ++ +     LQVS I Q
Sbjct:  725 LMTVVFFWAMHDTDFFSDKFGVKSLRNS-----DEEMMSALYLQVSIISQ 769          

HSP 3 Score: 28.4906 bits (62), Expect = 4.749e-22
Identity = 15/29 (51.72%), Postives = 20/29 (68.97%), Query Frame = 2
Query:  566 RALIFLTRARSWSFC*PSWAWLLVLGFRL 652
            +ALIF+TR+RSWSF       LLV+ F +
Sbjct:  769 QALIFVTRSRSWSFL-ERPGMLLVIAFMI 796          
BLAST of EY735451 vs. ExPASy Swiss-Prot
Match: PMA1_ARATH (ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 7.983e-22
Identity = 43/80 (53.75%), Postives = 52/80 (65.00%), Query Frame = 3
Query:  198 MKNLLLYPGSMC-RVCFVFILNR--WFLVCSSFKIPELP----GTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLA 416
            MKN  +Y  S+  R+ F F+L    W    S+F +  +     GTIMTISKDRVKPSP PDSWKL EIF TG++LGGY A
Sbjct:  642 MKNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQA 721          

HSP 2 Score: 40.817 bits (94), Expect = 7.983e-22
Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 1
Query:  418 MMTVIFFWAAYRTDFFPRTFGVSSLHEKGYK*LEKALPQQYTLQVSTIYQ 567
            +M+VIFFWAA++TDFF   FGV S+ +      ++ +   Y LQVS I Q
Sbjct:  722 IMSVIFFWAAHKTDFFSDKFGVRSIRDNN----DELMGAVY-LQVSIISQ 766          

HSP 3 Score: 28.4906 bits (62), Expect = 7.983e-22
Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 2
Query:  566 RALIFLTRARSWSFC*PSWAWLLV 637
            +ALIF+TR+RSWSF     A L++
Sbjct:  766 QALIFVTRSRSWSFVERPGALLMI 789          

HSP 4 Score: 68.5514 bits (166), Expect = 7.177e-11
Identity = 33/38 (86.84%), Postives = 35/38 (92.11%), Query Frame = 3
Query:    3 YAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDG 116
            YAVSITIRIV GFML+ALIW+FDF  FMVLIIAILNDG
Sbjct:  648 YAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDG 685          
BLAST of EY735451 vs. ExPASy Swiss-Prot
Match: PMA3_ARATH (ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.132e-21
Identity = 44/80 (55.00%), Postives = 52/80 (65.00%), Query Frame = 3
Query:  198 MKNLLLYPGSMC-RVCFVFILNR--WFLVCSSFKIPELP----GTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLA 416
            MKN  +Y  S+  R+ F F+L    W    S F +  +     GTIMTISKDRVKPSP PDSWKL EIF TGV+LGGY+A
Sbjct:  643 MKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYMA 722          

HSP 2 Score: 47.7506 bits (112), Expect = 1.132e-21
Identity = 25/50 (50.00%), Postives = 30/50 (60.00%), Query Frame = 1
Query:  418 MMTVIFFWAAYRTDFFPRTFGVSSLHEKGYK*LEKALPQQYTLQVSTIYQ 567
            +MTV+FFWAAY+TDFFPRTF V  L        E  +     LQVS + Q
Sbjct:  723 IMTVVFFWAAYKTDFFPRTFHVRDLRGS-----EHEMMSALYLQVSIVSQ 767          

HSP 3 Score: 71.2478 bits (173), Expect = 1.107e-11
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 3
Query:    3 YAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDG 116
            YAVSITIRIV GFML+ALIW+FDF PFMVLIIAILNDG
Sbjct:  649 YAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDG 686          
The following BLAST results are available for this feature:
BLAST of EY735451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PMA4_ARATH1.136e-3143.48ATPase 4, plasma membrane-type OS=Arabidopsis thal... [more]
PMA7_ARATH1.153e-2540.58ATPase 7, plasma membrane-type OS=Arabidopsis thal... [more]
PMA3_NICPL2.660e-2441.67Plasma membrane ATPase 3 OS=Nicotiana plumbaginifo... [more]
PMA1_NICPL2.660e-2440.56Plasma membrane ATPase 1 OS=Nicotiana plumbaginifo... [more]
PMA1_SOLLC5.860e-2441.67Plasma membrane ATPase 1 OS=Solanum lycopersicum G... [more]
PMA2_SOLLC1.297e-2343.23Plasma membrane ATPase 2 (Fragment) OS=Solanum lyc... [more]
PMA2_ARATH1.620e-2355.00ATPase 2, plasma membrane-type OS=Arabidopsis thal... [more]
PMA4_NICPL4.749e-2255.00Plasma membrane ATPase 4 OS=Nicotiana plumbaginifo... [more]
PMA1_ARATH7.983e-2253.75ATPase 1, plasma membrane-type OS=Arabidopsis thal... [more]
PMA3_ARATH1.132e-2155.00ATPase 3, plasma membrane-type OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-109-C08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735451 ID=EY735451; Name=EY735451; organism=Citrus sinensis; type=EST; length=1054bp
TATATGCAGTATCTATTACCATCCGTATTGTGCTTGGTTTCATGCTGCTG
GCTCTCATTTGGCAGTTTGACTTCCCACCCTTCATGGTGCTGATAATTGC
TATTCTTAATGATGGTTTGTATTGCTCTTTCTTTTTTTTTTGTGTGTGTG
TGTGTATGTCTCCCCACTGACCCCCCAAAATGTGGTTGGTTCTCTGTATG
AAGAATTTATTACTTTATCCTGGTTCCATGTGTCGAGTTTGTTTTGTCTT
TATCCTGAATAGATGGTTCCTTGTCTGTTCTTCCTTCAAAATACCTGAAC
TGCCAGGTACCATTATGACAATATCGAAAGATAGAGTGAAACCATCTCCT
CTGCCAGACAGCTGGAAATTGGCTGAGATCTTTACAACTGGAGTCATTCT
TGGTGGTTATTTAGCAAATGATGACAGTGATTTTCTTCTGGGCTGCGTAC
CGGACAGATTTCTTCCCACGTACATTTGGTGTTTCGAGTCTTCATGAAAA
AGGATATAAATGACTGGAAAAAGCCTTGCCTCAGCAATATACCCTGCAAG
TGAGTACCATTTATCAGGGCCCTCATATTCTTGACCCGTGCTAGGAGTTG
GTCTTTTTGTTGACCGTCCTGGGCCTGGTTACTTGTTCTGGGTTTTCGCT
TGTGGTCCAACTAATTGCAATTCCTGATTTGCTGGCCAATGCAAACGTGG
AACTTTTTCTGAAATTTAAAGGATTTGGGATGGGGGTTGGGGTTGGTGGG
GGTCCGGCTTTTACAAATCCACCTTTTTACCTCCCCACTTTGATTTTTTT
AATATCTTCCCATCCAAAATCGCTTTGAACGGAGAAAGGGGTTGAAATTT
TTTCCTTTTTAGTAACAAGGGATATTTCCTTTCTACGGAAAAAAAAAAGT
TTTTGAGGTAAAAAAAAGAAATGAAGTGTATTTTATTAGGGCCATATTCA
ATAACATAAAAGACTCCCCCCACCCTCCGGGTGTTATATACCTACACACC
TATTGTAATAATAAAACGGAATATATTCTTCATGACTAGAAATAAACGCA
AAAC
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