EY735447

Overview
NameEY735447
Unique NameEY735447
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1025
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735447 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.247e-29
Identity = 74/155 (47.74%), Postives = 99/155 (63.87%), Query Frame = 3
Query:  105 SVVAARVTGIR-KSGVYQFSSVK--YLPGTLQRNVSLSVRCMAKNEQQKDQ-----------STQPP-----KLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGNQ--CSAFGCVPWFLCLKVSAWS 506
            S+++  +T I  +S V QF+++   Y+P TL+RNVSL VR MA+ E ++             ST  P     + P++STKFSD+ AFSGPAPERINGRLAMIGFVAA+ VE++KGQ +  QLS GGVAWFLG     S    +P+F  + V + S
Sbjct:    8 SIMSNSMTNISSRSRVNQFTNIPSVYIP-TLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKS 161          

HSP 2 Score: 31.9574 bits (71), Expect = 3.247e-29
Identity = 15/20 (75.00%), Postives = 16/20 (80.00%), Query Frame = 1
Query:  553 NGRFAIRGLVLLAVTEFVKG 612
            NGR A+ GLV LA TEFVKG
Sbjct:  173 NGRIAMLGLVALAFTEFVKG 192          
BLAST of EY735447 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.826e-20
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 3
Query:  186 LQRNVSLSVRCMAKN------EQQKDQSTQP------PKLPRISTKFS-DVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFL 440
            ++RN   +VR M ++      +QQK Q T        P    ++TK + D+F+F G APERINGR AMIGFVAA+ VEL+ G+DVF+Q+ +GGV WFL
Sbjct:   41 MRRNAKFTVRSMREDNEKEEQQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFL 138          

HSP 2 Score: 33.113 bits (74), Expect = 7.826e-20
Identity = 15/22 (68.18%), Postives = 18/22 (81.82%), Query Frame = 1
Query:  547 VGNGRFAIRGLVLLAVTEFVKG 612
            + NGRFA+ GLV LA TE+VKG
Sbjct:  172 IWNGRFAMIGLVALAFTEYVKG 193          
BLAST of EY735447 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.088e-18
Identity = 45/96 (46.88%), Postives = 57/96 (59.38%), Query Frame = 3
Query:  156 FSSVKYLP-GTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDG-GVAWF 437
            F+    LP G+ +   +L  R +    Q +  +  PP  P+ ST   D  AFSGPAPERINGRLAM+GFV ALAVE  +G  + +QL  G G AWF
Sbjct:   10 FAGAAVLPRGSARSLPALGRRTLVVRAQTEGPNAPPPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWF 105          

HSP 2 Score: 29.6462 bits (65), Expect = 1.088e-18
Identity = 15/24 (62.50%), Postives = 18/24 (75.00%), Query Frame = 1
Query:  553 NGRFAIRGLVLLAVTEFVKGRTPW 624
            NGRFA+ GLV LA TE + G TP+
Sbjct:  142 NGRFAMIGLVALAATEIITG-TPF 164          
BLAST of EY735447 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.414e-18
Identity = 52/125 (41.60%), Postives = 67/125 (53.60%), Query Frame = 3
Query:   66 MAASLATQSMLGSSVVAARVTGIRKSGVYQFSSVKYLPGTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDG-GVAWF 437
            MA  ++  S  G++VV        +S    F + + LP       +L  R +    Q +  S  PP  P+ ST   D  AFSGPAPERINGRLAM+GFV ALAVE  +G  + +QL  G G AWF
Sbjct:    1 MATMMSMSSFAGAAVVP-------RSSASSFGA-RSLP-------ALGRRALVVRAQTEGPSAPPPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWF 110          

HSP 2 Score: 29.6462 bits (65), Expect = 1.414e-18
Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:  553 NGRFAIRGLVLLAVTEFVKG 612
            NGRFA+ GLV LA TE + G
Sbjct:  147 NGRFAMLGLVALAATEIITG 166          
BLAST of EY735447 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.050e-14
Identity = 42/98 (42.86%), Postives = 54/98 (55.10%), Query Frame = 3
Query:  252 TQPPKLPRISTKFS-----DVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLS--DGGVAWFLGNQCSAFGCVPWFLCLKVSAWSLKSDGV 524
            T  P  P+  TK +     D  AFSGPAPERINGRLAM+GFVAAL+VE ++G  +  Q+     G+AWFL      F        L+  +   KS G+
Sbjct:  101 TTIPAAPKPVTKKANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLAT-AGVFSVASLLPLLQGQSVESKSSGI 197          

HSP 2 Score: 31.9574 bits (71), Expect = 1.050e-14
Identity = 14/20 (70.00%), Postives = 16/20 (80.00%), Query Frame = 1
Query:  553 NGRFAIRGLVLLAVTEFVKG 612
            NGRFA+ GLV LA TEF+ G
Sbjct:  206 NGRFAMLGLVALAATEFITG 225          
The following BLAST results are available for this feature:
BLAST of EY735447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ELI_PEA3.247e-2947.74Early light-induced protein, chloroplastic OS=Pisu... [more]
DS22_CRAPL7.826e-2047.96Desiccation stress protein DSP-22, chloroplastic O... [more]
ELI6_HORVU1.088e-1846.88Low molecular mass early light-inducible protein H... [more]
ELI9_HORVU1.414e-1841.60Low molecular mass early light-inducible protein H... [more]
ELI5_HORVU1.050e-1442.86High molecular mass early light-inducible protein ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-109-B11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735447 ID=EY735447; Name=EY735447; organism=Citrus sinensis; type=EST; length=1025bp
AAGGAGCCCATTAACCTAAAAACTCCCAGTTGCTAAATTATTCCTCCGTT
GCATAATCTACAAAAATGGCTGCTTCACTCGCCACTCAATCTATGCTTGG
AAGCTCTGTCGTCGCAGCTCGTGTTACCGGCATCAGGAAATCTGGGGTGT
ACCAATTTTCCTCTGTTAAGTACTTACCTGGTACTCTGCAGAGAAATGTT
AGCTTATCAGTGCGCTGCATGGCTAAGAATGAGCAGCAGAAGGATCAATC
AACTCAGCCACCAAAGCTACCGCGTATAAGCACGAAGTTCTCTGACGTGT
TTGCGTTCAGCGGGCCGGCACCGGAGAGGATAAACGGGAGGCTTGCGATG
ATTGGGTTCGTGGCTGCATTGGCGGTGGAGCTATCCAAGGGTCAGGATGT
GTTTGCCCAGTTATCAGACGGTGGAGTTGCCTGGTTCTTGGGGAACCAGT
GTTCTGCTTTCGGTTGCGTCCCCTGGTTCCTTTGTTTAAAGGTGTCAGCG
TGGAGTCTAAAATCGGATGGGGTTCATGAACTTCGGATGCTGAGTTGTGG
GAAATGGGAGGTTCGCTATAAGGGGTCTGGTGCTTTTGGCTGTCACTGAA
TTTGTTAAAGGGAGAACCCCTTGGTTTTAATTAAGTCCAATTTTCCCGTG
GAATGGCGGAATGGAAAATCTTAAATGAATAAAAAAAAACCCTTTTTCTT
AAAATTGAAACGGACCCTCAGGTTTCTTTTCCGGGGGCAAAATTTTGGGG
GATAAAGAATTAGGGGGGGGGTGAAAGTAAAAATATCTGGTTTTCCCACA
GCCCATTTATCCCAAAAAAAAAATCACCCATTTTCCGCTTTTTAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAATAAAAAAGGGAGGGTGCGCCACTATAA
AAGAAATAACAAGATAAAAATTTAATATGGAGGGGGGAGAGAAGAGGCTA
AGAAACACCTATGAAATAAGGGGGGGCAGCAGAAAAAAAATATCATATAA
AAAAGTAAAAGGAGTGACAAAGAAC
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