EY735443

Overview
NameEY735443
Unique NameEY735443
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1033
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY735443 vs. ExPASy Swiss-Prot
Match: PBP2_NEIGO (Penicillin-binding protein 2 OS=Neisseria gonorrhoeae GN=penA PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.488e-17
Identity = 46/114 (40.35%), Postives = 77/114 (67.54%), Query Frame = 3 
Query:  192 RARLVLILLFGGFTVLAGRALFLQGLSTEFLQQQGERRYERTLTLSATRGKIMDRNGAVLASSVPARAIWAIPEDLKQV-TPSQLDSLAKLLETPIADLRRRVEE-DKNFVHLK 527
            R   VL+ +   F  L  R L+LQ ++  FL++QG+ R  RT  L ATRG + DRNGAVLA S P  +++A+P+D+K++ + +QL+ L++L++ P+  LR ++E+  K+F+ +K
Sbjct:   27 RISFVLMAMAVLFACLIARGLYLQTVTYNFLKEQGDNRIVRTQALPATRGTVSDRNGAVLALSAPTESLFAVPKDMKEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIK 140
[Close]
BLAST of EY735443 vs. ExPASy Swiss-Prot
Match: PBP2_NEIMB (Penicillin-binding protein 2 OS=Neisseria meningitidis serogroup B GN=penA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.109e-16
Identity = 46/114 (40.35%), Postives = 78/114 (68.42%), Query Frame = 3 
Query:  192 RARLVLILLFGGFTVLAGRALFLQGLSTEFLQQQGERRYERTLTLSATRGKIMDRNGAVLASSVPARAIWAIPEDLKQV-TPSQLDSLAKLLETPIADLRRRVEE-DKNFVHLK 527
            R   VL+ +   F  L  R L+LQ ++  FL++QG+ R  RT TL ATRG + DRNGAVLA S P  +++A+P+++K++ + +QL+ L++L++ P+  LR ++E+  K+F+ +K
Sbjct:   27 RISFVLMAIAVLFAGLIARGLYLQTVTYNFLKEQGDNRIVRTQTLPATRGTVSDRNGAVLALSAPTESLFAVPKEMKEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIK 140
[Close]
BLAST of EY735443 vs. ExPASy Swiss-Prot
Match: PBP2_NEIMA (Penicillin-binding protein 2 OS=Neisseria meningitidis serogroup A GN=penA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.109e-16
Identity = 46/114 (40.35%), Postives = 78/114 (68.42%), Query Frame = 3 
Query:  192 RARLVLILLFGGFTVLAGRALFLQGLSTEFLQQQGERRYERTLTLSATRGKIMDRNGAVLASSVPARAIWAIPEDLKQV-TPSQLDSLAKLLETPIADLRRRVEE-DKNFVHLK 527
            R   VL+ +   F  L  R L+LQ ++  FL++QG+ R  RT TL ATRG + DRNGAVLA S P  +++A+P+++K++ + +QL+ L++L++ P+  LR ++E+  K+F+ +K
Sbjct:   27 RISFVLMAIAVLFAGLIARGLYLQTVTYNFLKEQGDNRIVRTQTLPATRGTVSDRNGAVLALSAPTESLFAVPKEMKEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIK 140
The following BLAST results are available for this feature:
BLAST of EY735443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PBP2_NEIGO8.488e-1740.35Penicillin-binding protein 2 OS=Neisseria gonorrho... [more]
PBP2_NEIMB1.109e-1640.35Penicillin-binding protein 2 OS=Neisseria meningit... [more]
PBP2_NEIMA1.109e-1640.35Penicillin-binding protein 2 OS=Neisseria meningit... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-109-B04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735443 ID=EY735443; Name=EY735443; organism=Citrus sinensis; type=EST; length=1033bp
AAAAGGGCCCTGCGGTACGGTCCGGATTCCCGGGTCGACGTGATCGCGCG
CGACAGCCTGAAGATGATTCCCATCGTGCCTGACCGCACGCTGTACCTGA
ACCAGGCGCCGGTGTCGGCCAACGGAGGTGCCCAATGAAGCGCGTTCCGT
TCTTCGACAATCCGGTGCTGCGCGGCCAGCTGCCCACCTGGCGTGCGCGC
CTGGTGCTGATCCTGCTGTTCGGCGGTTTCACCGTGCTGGCCGGCCGCGC
GCTGTTCCTGCAGGGGCTGTCCACCGAATTCCTGCAGCAGCAGGGCGAGC
GCCGCTACGAGCGCACCCTGACGCTGTCCGCCACGCGCGGCAAGATCATG
GACCGCAATGGCGCGGTGCTGGCCTCGAGCGTGCCGGCGCGCGCCATCTG
GGCCATCCCCGAAGACCTGAAGCAGGTCACGCCCAGCCAGCTGGACTCGC
TGGCCAAACTGCTGGAAACGCCGATCGCCGACCTGCGCCGCCGGGTCGAG
GAAGACAAGAACTTCGTCCACCTGAAAGCGCCGGGTCTCCAATGGACGTG
GCCGAAAAGATCAAGCAACCCGGCCTGCCCGGCGTGCACCGTCACCCCGA
GACCCCCGCTAATACCCGGAAGGGCTACCAGGATGGACCACGATGGTGGT
TTTCAACCACTGAAATGTAAAATGGTAGAATGGCGAATAATGGAACTCAA
ACAACAAATTTTAGGGAAGACAGAGAGAAAAACGGACAAAATAAAAAAAA
AAGATTGAATAACACCTAAATAGAAAGGTAAGCAAAAGAACGATAAAATG
AGTATCCTTGAGATAATAAAAAACTAAAAACATGAAAAACAAAAGAAAAA
ATAGTAGAAATGATAAATAACAAAATGATCCACAGAAATAATAAAAAAAA
AATACAAAAAAAAAGAATCACTATTAAAATTGATAAAATAAAAATATCAA
TAATTAATATAATATAAATATAAAAATAATAGTCACAAACCTAGATGATA
CGACACAGCTAACAAAATAGTAAGAAACACGAA
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