EY735442

Overview
NameEY735442
Unique NameEY735442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1022
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12290 contig Csv1_Contig12290:1..1022. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 1.204e-31
Identity = 63/76 (82.89%), Postives = 66/76 (86.84%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NGHSYFNLVL+T V G GDV SVSIKGS TGWQ MSRNWGQNWQSNSYL+GQSLSFQ+  SDGRTVTSNNVVP  W
Sbjct:  165 NGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGW 240          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.204e-31
Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NGHSYFNLVLIT VGGAGDVHS  +KGS+TGWQAMSRNWGQNWQSNSYLNGQSLSF++T SDG+T+ SNNV    W
Sbjct:  163 NGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGW 238          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 3.502e-31
Identity = 59/76 (77.63%), Postives = 69/76 (90.79%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NGHSYFNLVL+T VGGAGDVHSV++KGS+T WQ MSRNWGQNWQSN+ LNGQ+LSF++TASDGRTV SNN+ P +W
Sbjct:  166 NGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASW 241          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.574e-31
Identity = 63/77 (81.82%), Postives = 69/77 (89.61%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NGHSYFNLVLI+ VGGAGDVH+VSIKGSKT  WQAMSRNWGQNWQSNSY+N QSLSFQ+T SDGRT+ SN+V P NW
Sbjct:  166 NGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNW 242          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.974e-31
Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NGHSYFNLVL+T V GAGDV SVSIKGS+TGWQ MSRNWGQNWQSN++L+GQSLSFQ+TASDGRTVTSNNV    W
Sbjct:  160 NGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGW 235          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.974e-31
Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NGHSYFNLVL+T V GAGDV SVSIKGS+TGWQ MSRNWGQNWQSN++L+GQSLSFQ+TASDGRTVTSNNV    W
Sbjct:  160 NGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGW 235          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.019e-30
Identity = 61/76 (80.26%), Postives = 66/76 (86.84%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NGHSYFNLVLIT VGGAGDVHS +IKGS+T WQAMSRNWGQNWQSNSYLNGQ+LSF++T SDGRTV S N  P  W
Sbjct:  162 NGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGW 237          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.922e-29
Identity = 60/76 (78.95%), Postives = 65/76 (85.53%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NGHSYFNLVL+T VGGAGDVHSVS+KGS+T WQ MSRNWGQNWQSNSYLNGQSLSF +T SD R+V S NV P  W
Sbjct:  167 NGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTW 242          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.625e-28
Identity = 58/76 (76.32%), Postives = 65/76 (85.53%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NGHSYFNLVLIT V GAGDV SVSIKG+ T WQ+MSRNWGQNWQSN+ L+GQ+LSF++T SDGRTV SNN  P NW
Sbjct:  165 NGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNW 240          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 4.007e-27
Identity = 54/75 (72.00%), Postives = 65/75 (86.67%), Query Frame = 2
Query:   44 GHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            GHSYFNLVL+T VGGAGDV +VS+KGS++GWQAMS NWG NWQ+ + L+GQ LSF++TASDGRTVTS+NV P  W
Sbjct:  163 GHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGW 237          
The following BLAST results are available for this feature:
BLAST of EY735442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
EXPA2_ORYSJ1.204e-3182.89Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA1_ARATH1.204e-3180.26Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXP15_ARATH3.502e-3177.63Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXPA8_ARATH4.574e-3181.82Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXPA4_ORYSJ5.974e-3181.58Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI5.974e-3181.58Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXP10_ARATH1.019e-3080.26Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXPA5_ARATH1.922e-2978.95Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]
EXP14_ARATH3.625e-2876.32Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXP11_ORYSJ4.007e-2772.00Expansin-A11 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-109-B01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735442 ID=EY735442; Name=EY735442; organism=Citrus sinensis; type=EST; length=1022bp
CCACGCGTCCGGAAGAAAGGAGGAATAAGGTTCCCCTTTTAATGGACACT
CATACTTCAACCTGGTTTTGATCACACCTGTCGGAGGAGCAGGAGATGTA
CATTCAGTATCAATCAAGGGTTCAAAGACTGGATGGCAAGCAATGTCAAG
GAACTGGGGCCAAAATTGGCAGAGCAATTCTTATCTTAACGGCCAAAGTC
TTTCTTTCCAATTGACAGCCAGTGACGGCAGGACTGTGACTAGCAACAAT
GTTGTGCCTGGAAATTGGCAATTTGGGCAAACCTTTGAGGGTGGTCAGTT
TTAGATTTTAAAAAAGTGAATCAGAATTTGTATATTTAATTGAATTTGGC
ACTGTTTGTGAGGGAGGAAGGGTGAGAATAGGGGTAGGTGAGGCTCAGGC
CTGGCCGATGTGGCCTGTCTTGTTGCTGTGGTGGTCTGTTGGCACCCGCT
AGGCCTCTATAAATAGAAATGATTGTGTTCTAAATATAGTTATTACTTCA
ATTGAATGAACGGGTATAAATTTCATTTCTATCAAATATATATACAAAAA
ATATAACTACTTCAACTATTATATAAAAATAAAATTTAAAAGGGAAATGG
GGCGGCCCCTCAAAAAGAACCAAACTTAAATATACGCGGGCTGGCAAACT
CAAAGCCCTTTCAAAAGGGGCACCCAAAATTAATTCCCGTGGGCCGCCTT
TTAAAAACGCCCGGACCGGGGAAAAACCCGGGGGTTACCCCATAATAATC
CCCTTCGCACCCCATCCCCCTTTTCCCCCACTTGGGATAAAATCAGGAAA
AGAGCCCCCCCCATTCCCCCCTTTTCCAAATTTTTCCCACCCCCTTAAAG
GGGAAAAGGGAACCCACCCCTGTATCCGCCCCCCAATATTACCGCGGAGG
GGGGGTGGGGGGGTTAACCCCCCGGAGAGGGCACCCCCACACATTTTGGG
CGAGCCCCTCCACCCCCCCCCCCCTCCTATTTTAATTCTTTTTTTTCTCT
TCTTTTTTTTTTTTTCACTCCA
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