EY735437

Overview
NameEY735437
Unique NameEY735437
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1010
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735437 vs. ExPASy Swiss-Prot
Match: PANE_PSEAE (Probable 2-dehydropantoate 2-reductase OS=Pseudomonas aeruginosa GN=panE PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.314e-48
Identity = 96/172 (55.81%), Postives = 116/172 (67.44%), Query Frame = 2 
Query:   32 TWHVLGAGSLGTXXXXXXXXXXXXXXXXXXDHARLASYQTGKGLTLVEHGVAHTYPVVGETSDSPGPIHRLLVACKAYDAQEAVAQLEHRLAPHAELILLQNGLGSQDAVAAQLPQARCIFASSTEGAFRESDWRVVFAGHGYTWAGKMRATLPRLLWLDELQAAGIPQAWN 547
            TWH+LGAGSLG+                  D  RL  YQ   GL+LVE G A  YP+  ET D   PI RLL+ACKAYDA+EA + + HRLA +AEL+LLQNGLGSQ AVAA+LP++RC+FASSTEGAFR+ D+RVVFAG G+TW G  R T     WL +L  AGIP +W+
Sbjct:    2 TWHILGAGSLGSLWAARLGRAGLPVRLILRDRQRLRRYQQAGGLSLVEDGQASLYPIAAETPDGGQPIQRLLLACKAYDAEEAASSVAHRLAGNAELLLLQNGLGSQQAVAARLPRSRCLFASSTEGAFRDGDFRVVFAGRGHTWLGDPRDT-NAPAWLTQLSQAGIPHSWS 172

HSP 2 Score: 25.7942 bits (55), Expect = 2.314e-48
Identity = 12/24 (50.00%), Postives = 13/24 (54.17%), Query Frame = 3 
Query:  534 PRHGTPDILTRRWGKLGLNGPIQP 605
            P   + DIL R W KL LN  I P
Sbjct:  168 PHSWSDDILERLWRKLALNCAINP 191
The following BLAST results are available for this feature:
BLAST of EY735437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PANE_PSEAE2.314e-4855.81Probable 2-dehydropantoate 2-reductase OS=Pseudomo... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-109-A02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735437 ID=EY735437; Name=EY735437; organism=Citrus sinensis; type=EST; length=1010bp
GGGTCCCGGGTCCGGGATTCCCGGGTCGACCACCTGGCATGTCCTCGGCG
CTGGCAGCCTCGGAACATTGTGGGCTGCCCGCCTGGCCCGCGCCCGGTTG
CCGGTGCGCCTGATCCTGCGGGACCACGCGCGGCTGGCGAGCTATCAGAC
CGGCAAGGGCCTGACCCTGGTCGAGCACGGCGTGGCTCACACCTATCCAG
TCGTCGGCGAAACATCCGACAGCCCTGGGCCGATTCATCGCCTGCTGGTG
GCGTGCAAAGCCTACGACGCCCAAGAGGCCGTCGCACAGCTTGAACATCG
TCTGGCACCCCACGCCGAGCTGATCCTGCTGCAAAACGGCCTGGGCAGCC
AGGATGCAGTCGCCGCCCAACTGCCCCAAGCCCGCTGCATCTTCGCCTCC
AGCACCGAAGGCGCGTTTCGCGAAAGCGACTGGCGGGTCGTATTTGCCGG
CCATGGCTACACCTGGGCTGGGAAGATGCGAGCCACCCTACCCCGCCTCT
TGTGGCTGGATGAACTGCAAGCCGCCGGCATCCCCCAGGCATGGAACCCC
CGATATCCTCACCCGCCGGTGGGGCAAACTGGGCCTGAACGGCCCCATCC
AACCCGGTGACTGGGCTGAATCATGGCCGCATTGGAAAAACTGCCAACCC
CTCAGTGGCAAATGGCCACCCCTGGGGCCCAAACTCGACCGAAATGGGTG
AATGGGTGGGGCCCAACCCCCCCCCCGCGCAGGGTTTTGCAAAAGCGAAT
GGAAACGGGTGGTTTCCGGGGCCCCGGGGGGCCCAAATTCTCCCTCGAGT
TTTCACAGACAGTGGGCAAAGTGCCCGGGGACACTCCAAAAATAGACTAA
TTTGTCGGGGGATAATGCCCCTGCGAAGGGGGGCCCCCCCTCAAAAGGAA
TCACCAAAGCTATTAATCATCACGGGCGGGATGAGGGAATGGTCAGCAAG
TGATTTTTTTTTATTAAGATGAAGGGAAGACCCCCCCCATAAATAATTTA
TGATTAATAT
back to top