EY735431

Overview
NameEY735431
Unique NameEY735431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length352
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1013 contig Csv1_Contig1013:819..1169. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735431 vs. ExPASy Swiss-Prot
Match: DLDH1_ARATH (Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=LPD1 PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 4.908e-26
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 3
Query:   12 GVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 182
            GVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMAT+DKPIHI
Sbjct:  451 GVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATYDKPIHI 507          
BLAST of EY735431 vs. ExPASy Swiss-Prot
Match: DLDH2_ARATH (Dihydrolipoyl dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=LPD2 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.155e-25
Identity = 53/57 (92.98%), Postives = 57/57 (100.00%), Query Frame = 3
Query:   12 GVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 182
            GVHIM+PNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEA+KEAAMAT+DKPIH+
Sbjct:  451 GVHIMSPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEAIKEAAMATYDKPIHM 507          
BLAST of EY735431 vs. ExPASy Swiss-Prot
Match: DLDH_PEA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Pisum sativum GN=LPD PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 3.517e-24
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 3
Query:   12 GVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 182
            GVHIMAPNAGELIHEA +A+ YDASSEDIARVCHAHPTMSEA+KEAAMAT+DKPIHI
Sbjct:  445 GVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKEAAMATYDKPIHI 501          
BLAST of EY735431 vs. ExPASy Swiss-Prot
Match: DLDH_DICDI (Dihydrolipoyl dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=lpd PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.103e-17
Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 3
Query:   12 GVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 182
            G HIM  NAGELI E VLA+ Y AS EDIAR CH HPT+SEA+KEAAM  +DKPIH+
Sbjct:  432 GAHIMGTNAGELIGECVLAMEYGASCEDIARTCHGHPTLSEAVKEAAMDAYDKPIHM 488          
BLAST of EY735431 vs. ExPASy Swiss-Prot
Match: DLDH_YEAST (Dihydrolipoyl dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=LPD1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.277e-17
Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 3
Query:   12 GVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 179
            G HI+ PNAGE+I EA LA+ Y AS+ED+ARVCHAHPT+SEA KEA MA +DK IH
Sbjct:  443 GAHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAFKEANMAAYDKAIH 498          
BLAST of EY735431 vs. ExPASy Swiss-Prot
Match: DLDH_TRYCR (Dihydrolipoyl dehydrogenase OS=Trypanosoma cruzi GN=LPD PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.628e-14
Identity = 38/56 (67.86%), Postives = 42/56 (75.00%), Query Frame = 3
Query:   12 GVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 179
            GVHI+   AGELI EA LA+ Y ASSED+ R CHAHPTMSEALKEA MA   K I+
Sbjct:  421 GVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHPTMSEALKEACMALVAKTIN 476          
BLAST of EY735431 vs. ExPASy Swiss-Prot
Match: DLDH_SCHPO (Dihydrolipoyl dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=dld1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.351e-14
Identity = 38/57 (66.67%), Postives = 44/57 (77.19%), Query Frame = 3
Query:   12 GVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATH-DKPIH 179
            GVH++ P AGELI EA LA+ Y AS+ED+ARVCHAHPT+SEA KEA MA    K IH
Sbjct:  454 GVHMIGPMAGELIGEATLALEYGASAEDVARVCHAHPTLSEATKEAMMAAWCGKSIH 510          
BLAST of EY735431 vs. ExPASy Swiss-Prot
Match: DLDH_CRIGR (Dihydrolipoyl dehydrogenase, mitochondrial OS=Cricetulus griseus GN=DLD PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.254e-13
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 3
Query:   12 GVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAM-ATHDKPIH 179
            G HI+ P AGE+++EA LA+ Y AS EDIARVCHAHPT+SEA +EA + A+  KPI+
Sbjct:  452 GAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKPIN 508          
BLAST of EY735431 vs. ExPASy Swiss-Prot
Match: DLDH_RAT (Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Dld PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.638e-13
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 3
Query:   12 GVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAM-ATHDKPIH 179
            G HI+ P AGE+++EA LA+ Y AS ED+ARVCHAHPT+SEA +EA + A+  KPI+
Sbjct:  452 GAHILGPGAGEMVNEAALALEYGASCEDVARVCHAHPTLSEAFREANLAASFGKPIN 508          
BLAST of EY735431 vs. ExPASy Swiss-Prot
Match: DLDH_MOUSE (Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus GN=Dld PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.638e-13
Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 3
Query:   12 GVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAM-ATHDKPIH 179
            G HI+ P AGE+++EA LA+ Y AS EDIARVCHAHPT+SEA +EA + A   KPI+
Sbjct:  452 GAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAAAFGKPIN 508          
The following BLAST results are available for this feature:
BLAST of EY735431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
DLDH1_ARATH4.908e-2698.25Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Ar... [more]
DLDH2_ARATH4.155e-2592.98Dihydrolipoyl dehydrogenase 2, mitochondrial OS=Ar... [more]
DLDH_PEA3.517e-2489.47Dihydrolipoyl dehydrogenase, mitochondrial OS=Pisu... [more]
DLDH_DICDI7.103e-1770.18Dihydrolipoyl dehydrogenase, mitochondrial OS=Dict... [more]
DLDH_YEAST9.277e-1769.64Dihydrolipoyl dehydrogenase, mitochondrial OS=Sacc... [more]
DLDH_TRYCR5.628e-1467.86Dihydrolipoyl dehydrogenase OS=Trypanosoma cruzi G... [more]
DLDH_SCHPO7.351e-1466.67Dihydrolipoyl dehydrogenase, mitochondrial OS=Schi... [more]
DLDH_CRIGR1.254e-1361.40Dihydrolipoyl dehydrogenase, mitochondrial OS=Cric... [more]
DLDH_RAT1.638e-1359.65Dihydrolipoyl dehydrogenase, mitochondrial OS=Ratt... [more]
DLDH_MOUSE1.638e-1361.40Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-107-H04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735431 ID=EY735431; Name=EY735431; organism=Citrus sinensis; type=EST; length=352bp
CAAGATATTGAGGGGTTCATATCATGGCACCCAATGCTGGAGAGCTCATC
CACGAGGCTGTCCTGGCCATTAATTATGATGCATCAAGTGAGGACATTGC
ACGTGTGTGCCATGCACATCCTACAATGAGTGAGGCATTGAAGGAGGCTG
CTATGGCCACTCACGACAAACCCATTCACATCTGAGAAGCGGGTTATTAC
TTTGTTATTTTTTGTTTGAGATTTTTCAGATATCTTGAAAAAGACGTTCT
TCTGTTTTCTCAATTGTCCAGCTTTGAAGCAGATGCTTTAATAGAAATTT
GTTTTTCCTCAGGATACAAAAAAAAAAAATAAAAAACAAACAAAAATATT
AG
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