EY735405

Overview
NameEY735405
Unique NameEY735405
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY735405 vs. ExPASy Swiss-Prot
Match: FECR_ECOLI (Protein fecR OS=Escherichia coli (strain K12) GN=fecR PE=4 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.837e-14
Identity = 70/214 (32.71%), Postives = 98/214 (45.79%), Query Frame = 3 
Query:  108 QGWLVDTGE-----LSTGTGERKHFTLDDGSLLTLNAQSRAIARFDAHQXXXXXXXXXXXXDVAKDP-ARPFVVQTRHGQIRALGTRFLVQRDEASTRLVMLHSRVEVV--TQDGARQIVEAGQSMRFDEQHTFGLWPAKGR*SRVEPRTPWSPRPVV*RSDRQPAQLSPP------GFCARIPMVGQLRLEGESIPPGKKKTAPLELLEKLIP 707
            Q W  +TGE       T  G      L+DGSLLTLN QS A  RFDAHQ              AKD   RPF V TR GQ+ ALGT F V++ +  T+L +    VEV+  +    ++IV AG+S++F       + P        +  T W+ + ++  SD+   ++         G     P V  LRL G    P K   A L ++ + +P
Sbjct:   97 QLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD------DESTSWT-KDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTF--PLKNTDAILNVIAQTLP 301
The following BLAST results are available for this feature:
BLAST of EY735405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FECR_ECOLI3.837e-1432.71Protein fecR OS=Escherichia coli (strain K12) GN=f... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-107-D05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735405 ID=EY735405; Name=EY735405; organism=Citrus sinensis; type=EST; length=1007bp
TTTCTTTGGGGGGCGGGACCGCAGTACAGGTCGGAATTCCGGGTCGACGC
TTTGTCGCTGGCAGCCTGGGTGTCGTCGCGTTGGCAGCGCTGTTTCTCGG
TCGTCGCCAGGGCTGGTTGGTGGATACCGGCGAGCTGTCCACTGGCACTG
GGGAGCGTAAACACTTCACGCTGGACGACGGCAGCTTGCTGACGCTGAAC
GCACAGAGCCGGGCGATTGCGCGTTTCGACGCACACCAGCGTGTGCTGGA
GTTACGGGAGGGGGAGTTGCTGGTGGACGTGGCCAAGGACCCGGCGCGGC
CCTTCGTGGTGCAAACCCGGCATGGCCAGATTCGCGCGTTGGGTACCCGA
TTCCTGGTGCAGCGTGACGAAGCGTCCACCCGTCTGGTGATGCTGCATTC
GCGAGTGGAAGTGGTCACTCAGGACGGCGCGCGCCAAATCGTGGAGGCGG
GGCAGAGCATGCGGTTTGATGAGCAACACACCTTCGGCCTTTGGCCCGCT
AAAGGGCGATGAAGCCGGGTGGAGCCAAGGACGCCTTGGAGTCCACGACC
GGTCGTTTAGCGAAGTGATCGACAGCCTGCGCAGCTATCGCCCCCGGGAT
TCTGCGCCCGAATCCCAATGGTGGGGCAGCTGCGCCTGGAAGGGGAATCT
ATTCCCCCGGGAAAAAAGAAGACCGCACCCCTGGAGTTGCTGGAAAAATT
AATTCCCGAATTCTGGGGGACTTAATCCACAACAAATTGGGAGAAGAATT
CAAGGCGCCGTAAAACGCGGATAAAAACGACTATGGAATTTATTGTCTAA
ACACCTCGCACTTAAAAATAAGGGTGAAGTGGCTGGGGCGCCGACCCCCC
GGGAGACGAATAAACAGGCGGGGCGGAATGCTCGCGGTGGACCAAATTCG
GAATGAAAAGACGCACACCCGAAACGAGACCGGGCCGTGGGGCGACTTGA
CGATAATGATAGTTTTACCGTGAAGCTCAAATCCAAATGCGGGGGATGTC
ATTGTAT
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