EY735366

Overview
NameEY735366
Unique NameEY735366
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735366_ssr289 microsatellite EY735366_ssr289:289..303. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY735366 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.217e-44
Identity = 103/163 (63.19%), Postives = 112/163 (68.71%), Query Frame = 1
Query:  124 DLKKAYRKAALKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIFQ-XXXXXXXXXXXXIKGRRPRRGEDLILPLLVSLGDLYNGTSKKLRGSPRMYSAPSAKGRGLRPGASLKCSGWPGIGDEQLQ*KTLAPS*I*QRQ 609
            DLKKAYRKAA+KNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE        HDPFDIFQ              +GRR RRGED+I PL VSL DLYNGTSKKL  S R       KG+G + GAS+KC G  G G  ++  + L PS I Q Q
Sbjct:   27 DLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE-GMGGGGGHDPFDIFQSFFGGSPFGGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLS-RNVICSKCKGKGSKSGASMKCPGCQGSG-MKVSIRHLGPSMIQQMQ 186          

HSP 2 Score: 25.0238 bits (53), Expect = 1.217e-44
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 2
Query:   56 PKKSDNTEYY 85
            PKKSDNT+YY
Sbjct:    5 PKKSDNTKYY 14          
BLAST of EY735366 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.319e-43
Identity = 97/163 (59.51%), Postives = 110/163 (67.48%), Query Frame = 1
Query:  124 DLKKAYRKAALKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIFQ-XXXXXXXXXXXXIKGRRPRRGEDLILPLLVSLGDLYNGTSKKLRGSPRMYSAPSAKGRGLRPGASLKCSGWPGIGDEQLQ*KTLAPS*I*QRQ 609
            DLKKAY+KAA+KNHPDKGGDPEKFKELA AYEVLSDPEKREIYDQYGEDALKE        HDPFDIFQ              +GRR RRGED++ PL VSL DL+ GT+KKL  S R        G+G + GAS+KCSG  G G  ++  + L PS I Q Q
Sbjct:   28 DLKKAYKKAAIKNHPDKGGDPEKFKELAHAYEVLSDPEKREIYDQYGEDALKEGMGGGGGMHDPFDIFQSFFGGSPFGGVGSSRGRRQRRGEDVVHPLKVSLEDLFTGTTKKLSLS-RNVICSKCTGKGSKSGASMKCSGCQGTG-MKVSIRHLGPSMIQQMQ 188          

HSP 2 Score: 26.1794 bits (56), Expect = 1.319e-43
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 2
Query:   50 RAPKKSDNTEYY 85
            RAPKKSD+T YY
Sbjct:    4 RAPKKSDSTRYY 15          
BLAST of EY735366 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.718e-43
Identity = 94/163 (57.67%), Postives = 108/163 (66.26%), Query Frame = 1
Query:  124 DLKKAYRKAALKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIFQ-XXXXXXXXXXXXIKGRRPRRGEDLILPLLVSLGDLYNGTSKKLRGSPRMYSAPSAKGRGLRPGASLKCSGWPGIGDEQLQ*KTLAPS*I*QRQ 609
            DLKKAYRKAA+KNHPDKGGDPEKFKE+ QAYEVL+DPEKREIYDQYGE+ LKE        HDPFDIFQ              +GRR RRGED++ PL VSL DLYNGTSKKL  S R       KG+G + GAS+ C+   G G  ++  + L P  I Q Q
Sbjct:   28 DLKKAYRKAAIKNHPDKGGDPEKFKEIGQAYEVLNDPEKREIYDQYGEEGLKEGMGGGGGVHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGEDVVHPLKVSLEDLYNGTSKKLSLS-RNVLCTKCKGKGSKSGASMNCASCQGSG-MKVSIRQLGPGMIQQMQ 188          

HSP 2 Score: 28.4906 bits (62), Expect = 1.718e-43
Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 2
Query:   50 RAPKKSDNTEYY 85
            RAPKKSDNT+YY
Sbjct:    4 RAPKKSDNTKYY 15          
BLAST of EY735366 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 3.407e-42
Identity = 97/170 (57.06%), Postives = 109/170 (64.12%), Query Frame = 1
Query:  124 DLKKAYRKAALKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIFQXXXXXXXXXXXXIKGRRPRRGEDLILPLLVSLGDLYNGTSKKLRGSPRMYSAPSAKGRGLRPGASLKCSGWPGIGDEQLQ*KTLAPS*I*QRQPAFHRLHG 633
            DLKKAY+KAA+KNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE        HDPFDIF              + RR RRGED++ PL VSL D+Y GT KKL  S R        G+G + GASLKC G  G G  ++  + L P  I Q Q A +   G
Sbjct:   29 DLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGGGPFGGNTSRQRRQRRGEDVVHPLKVSLEDVYLGTMKKLSLS-RNALCSKCNGKGSKSGASLKCGGCQGSG-MKVSIRQLGPGMIQQMQHACNECKG 196          
BLAST of EY735366 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 5.812e-42
Identity = 96/163 (58.90%), Postives = 110/163 (67.48%), Query Frame = 1
Query:  124 DLKKAYRKAALKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIFQ-XXXXXXXXXXXXIKGRRPRRGEDLILPLLVSLGDLYNGTSKKLRGSPRMYSAPSAKGRGLRPGASLKCSGWPGIGDEQLQ*KTLAPS*I*QRQ 609
            DLKKAYRKAA+KNHPDKGGDPEKFKELAQAY+VLSDPEKREIYDQYGEDALKE        HDPFDIFQ              +GRR RRGED++ PL VSL +LYNGTSKKL  S R        G+G + GAS++C+   G G  ++  + L P  I Q Q
Sbjct:    7 DLKKAYRKAAIKNHPDKGGDPEKFKELAQAYDVLSDPEKREIYDQYGEDALKEGMGGGGGDHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGEDVVHPLKVSLEELYNGTSKKLSLS-RNVICSKCNGKGSKSGASMRCASCQGSG-MKVSIRQLGPGMIQQMQ 167          
BLAST of EY735366 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 2.208e-41
Identity = 91/151 (60.26%), Postives = 102/151 (67.55%), Query Frame = 1
Query:  106 RTLRKYDLKKAYRKAALKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIF-QXXXXXXXXXXXXIKGRRPRRGEDLILPLLVSLGDLYNGTSKKLRGSPRMYSAPSAKGRGLRPGASLKCSGWPGIG 555
            +T    DLKKAY+KAA+KNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE        HDPFDIF               +GRR RRGED++ PL VSL D+Y GT+KKL  S R        G+G + GAS+KC G  G G
Sbjct:   23 KTAAPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGSGGHPFGSHSRGRRQRRGEDVVHPLKVSLEDVYLGTTKKLSLS-RKALCSKCNGKGSKSGASMKCGGCQGSG 172          
BLAST of EY735366 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.999e-22
Identity = 71/164 (43.29%), Postives = 95/164 (57.93%), Query Frame = 1
Query:  124 DLKKAYRKAALKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFD-IFQXXXXXXXXXXXXIKGRRPRRGEDLILPLLVSLGDLYNGTSKKLRGSPRMYSAPSAKGRGLRPGASLKCSGWPGIGDEQLQ*KTLAPS*I*QRQ 609
            +LKKAYRK A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+E         D F  IF              +  R RRGED++ PL VSL DLYNG + KL+ S  +  + +  G+G + GA  KCS   G G  ++  + LAP  + Q Q
Sbjct:   23 ELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFGFMGNQSRSRNGR-RRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCS-ACSGQGGKSGAVQKCSACRGRG-VRIMIRQLAPGMVQQMQ 183          
BLAST of EY735366 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.999e-22
Identity = 71/164 (43.29%), Postives = 95/164 (57.93%), Query Frame = 1
Query:  124 DLKKAYRKAALKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFD-IFQXXXXXXXXXXXXIKGRRPRRGEDLILPLLVSLGDLYNGTSKKLRGSPRMYSAPSAKGRGLRPGASLKCSGWPGIGDEQLQ*KTLAPS*I*QRQ 609
            +LKKAYRK A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+E         D F  IF              +  R RRGED++ PL VSL DLYNG + KL+ S  +  + +  G+G + GA  KCS   G G  ++  + LAP  + Q Q
Sbjct:   23 ELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFGFMGNQSRSRNGR-RRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCS-ACSGQGGKSGAVQKCSACRGRG-VRIMIRQLAPGMVQQMQ 183          
BLAST of EY735366 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.999e-22
Identity = 71/164 (43.29%), Postives = 95/164 (57.93%), Query Frame = 1
Query:  124 DLKKAYRKAALKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFD-IFQXXXXXXXXXXXXIKGRRPRRGEDLILPLLVSLGDLYNGTSKKLRGSPRMYSAPSAKGRGLRPGASLKCSGWPGIGDEQLQ*KTLAPS*I*QRQ 609
            +LKKAYRK A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+E         D F  IF              +  R RRGED++ PL VSL DLYNG + KL+ S  +  + +  G+G + GA  KCS   G G  ++  + LAP  + Q Q
Sbjct:   23 ELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFGFMGNQSRSRNGR-RRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCS-ACSGQGGKSGAVQKCSACRGRG-VRIMIRQLAPGMVQQMQ 183          
BLAST of EY735366 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.999e-22
Identity = 71/164 (43.29%), Postives = 95/164 (57.93%), Query Frame = 1
Query:  124 DLKKAYRKAALKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFD-IFQXXXXXXXXXXXXIKGRRPRRGEDLILPLLVSLGDLYNGTSKKLRGSPRMYSAPSAKGRGLRPGASLKCSGWPGIGDEQLQ*KTLAPS*I*QRQ 609
            +LKKAYRK A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+E         D F  IF              +  R RRGED++ PL VSL DLYNG + KL+ S  +  + +  G+G + GA  KCS   G G  ++  + LAP  + Q Q
Sbjct:   23 ELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFSFMGNQSRSRNGR-RRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCS-ACSGQGGKSGAVQKCSACRGRG-VRIMIRQLAPGMVQQMQ 183          
The following BLAST results are available for this feature:
BLAST of EY735366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 316
Match NameE-valueIdentityDescription
DNJH_CUCSA1.217e-4463.19DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH_ATRNU1.319e-4359.51DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNJH2_ALLPO1.718e-4357.67DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNAJ3_ARATH3.407e-4257.06Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJH1_ALLPO5.812e-4258.90DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNAJ2_ARATH2.208e-4160.26Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJA2_RAT2.999e-2243.29DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA2_MOUSE2.999e-2243.29DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA2_HUMAN2.999e-2243.29DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN2.999e-2243.29DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-096-F07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735366 ID=EY735366; Name=EY735366; organism=Citrus sinensis; type=EST; length=1026bp
CGTCTACTCTGAAGATCTGATATTTTTTAGTACATGAAGATGTTCGCGAA
GAGCGCCAAAGAAAAGCGATAACACCGAGTACTACTGATATTCTCGGATT
CTCTAAGAACGCTTCGCAAGTATGATCTGAAGAAGGCTTATAGGAAAGCC
GCCCTCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGAAGTTTAAAGA
GTTGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAGCGTGAAATAT
ATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGGTGGTGGTGGT
GGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCGGTGGCAGCCC
ATTTGGTGGTGGGAGCATCAAAGGAAGAAGGCCGAGGAGGGGAGAGGACC
TTATCCTTCCCCTCCTGGTTTCGTTGGGAGATCTGTACAATGGGACATCT
AAAAAACTACGCGGCTCTCCGCGAATGTATTCTGCACCAAGTGCAAAGGG
AAGGGGTCTTAGGCCAGGTGCATCATTGAAATGTTCAGGCTGGCCGGGGA
TCGGGGATGAACAGTTACAATAAAAAACCTTGGCCCCATCATGAATTTAA
CAAAGGCAACCAGCTTTCCATAGATTGCATGGGTTACTGGAAAAAAGGAT
ACATGGACAAGAGATCGACTTGCCAAAAGGGATAGGGTTATAAAAGGGCA
TTTTAAGAAAATAACAAGCCTTGCGAAGTTTTTGCTTAAAAAGATAGTAA
GGTAAATAAGGGACAATATGATATTAAGTTTCCCCGTGAAAAATAAAGAA
AAAAACGCCCCCACGACCTCCGGGCAACGGGGGGAACAACTGTTTTTTTA
CTATCTACCACACACAACACAAGGATGAACACCCAAAGATAATTGAATGC
AAACAGGCGGGGGGTAATTATCCGATTTTTTTTTTGATAGCACTAACCCC
CGCTGGTGCTACCTGAGACGCCACAAGATACACCCTACGAGCAGACAGCT
GATATCTTACTAACTATTGTAAGAAT
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