EY735341

Overview
NameEY735341
Unique NameEY735341
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10248 contig Csv1_Contig10248:600..1205. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735341 vs. ExPASy Swiss-Prot
Match: AFB2_ARATH (Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana GN=AFB2 PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 4.363e-60
Identity = 126/195 (64.62%), Postives = 141/195 (72.31%), Query Frame = 3
Query:   15 KLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPS---GVDNAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLGNAFLLHLLGITTRECCM*LDGLPKNSPILEIRDSPFSANTKISE 590
            KLI+ C+KL+RLWILDSIGD+GL VVA TCKELQELRVFPS   G  N AVTEEGLVAISAGCPKLHS+LYFCQQMTNAAL+TVAKN  NF RFRLCIL+  KPD VT QPLDEGFGAIV++CK           TDQVFLYIGMYA QL     +   G T +     L+G  K    LEIRDSPF     +++
Sbjct:  304 KLIQHCKKLQRLWILDSIGDKGLEVVASTCKELQELRVFPSDLLGGGNTAVTEEGLVAISAGCPKLHSILYFCQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFGAIVKACKSLRRLSLSGLLTDQVFLYIGMYANQL-EMLSIAFAGDTDKGMLYVLNGCKKMKK-LEIRDSPFGDTALLAD 496          
BLAST of EY735341 vs. ExPASy Swiss-Prot
Match: AFB3_ARATH (Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana GN=AFB3 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.394e-58
Identity = 123/189 (65.08%), Postives = 138/189 (73.02%), Query Frame = 3
Query:   15 KLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV-----DNAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLGNAFLLHLLGITTRECCM*LDGLPKNSPILEIRDSPF 566
            KLI+ C++L+RLWILDSIGD+GL VVA TCKELQELRVFPS V     +NA+VTE GLVAISAGCPKLHS+LYFC+QMTNAALI VAKN  NF RFRLCIL+  KPD +T Q LDEGFGAIVQ+CK           TDQVFLYIGMYAEQL     +   G T +     L+G  K    LEIRDSPF
Sbjct:  304 KLIQLCKRLQRLWILDSIGDKGLAVVAATCKELQELRVFPSDVHGEEDNNASVTEVGLVAISAGCPKLHSILYFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEGFGAIVQACKGLRRLSVSGLLTDQVFLYIGMYAEQL-EMLSIAFAGDTDKGMLYVLNGCKKMRK-LEIRDSPF 490          
BLAST of EY735341 vs. ExPASy Swiss-Prot
Match: TIR1B_ORYSJ (Transport inhibitor response 1-like protein Os04g0395600 OS=Oryza sativa subsp. japonica GN=Os04g0395600 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 5.711e-52
Identity = 112/187 (59.89%), Postives = 132/187 (70.59%), Query Frame = 3
Query:   15 KLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSG---VDNAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLGNAFLLHLLGITTRECCM*LDGLPKNSPILEIRDSPF 566
            K+I  C KL+RLW+LD I D+GL VVA +CK+LQELRVFPS       +AVTEEGLVA+S GCPKL+SLLYFC QMTNAAL+TVAKN  NFTRFRLCIL+  KPD VT QPLDEGFGAIV+ CK           TD+VF+YIG YA+QL     +   G + +     ++G  KN   LEIRDSPF
Sbjct:  304 KMISRCVKLQRLWVLDCISDKGLQVVASSCKDLQELRVFPSDFYVAGYSAVTEEGLVAVSLGCPKLNSLLYFCHQMTNAALVTVAKNCPNFTRFRLCILEPGKPDVVTSQPLDEGFGAIVRECKGLQRLSISGLLTDKVFMYIGKYAKQL-EMLSIAFAGDSDKGMMHVMNGC-KNLRKLEIRDSPF 488          
BLAST of EY735341 vs. ExPASy Swiss-Prot
Match: TIRC_ORYSJ (Transport inhibitor response 1-like protein Os11g0515500 OS=Oryza sativa subsp. japonica GN=Os11g0515500 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.317e-48
Identity = 108/181 (59.67%), Postives = 125/181 (69.06%), Query Frame = 3
Query:   30 CRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVDNAA--VTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLGNAFLLHLLGITTRECCM*LDGLPKNSPILEIRDSPF 566
            C+KL++LW+LD IGD GL +VA +C +LQELRVFP+  +  A  VTEEGLVAISAGC KL S+LYFCQ+MTN+ALITVAKN   FT FRLC+LD    D VT QPLDEG+GAIVQSCK           TD VFLYIGMYAE+L     +   G T       L+G  KN   LEIRDSPF
Sbjct:  304 CKKLQQLWVLDHIGDEGLKIVASSCIQLQELRVFPANANARASTVTEEGLVAISAGCNKLQSVLYFCQRMTNSALITVAKNCPRFTSFRLCVLDPGSADAVTGQPLDEGYGAIVQSCKGLRRLCLSGLLTDTVFLYIGMYAERL-EMLSVAFAGDTDDGMTYVLNGC-KNLKKLEIRDSPF 482          
BLAST of EY735341 vs. ExPASy Swiss-Prot
Match: TIR1_ARATH (Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana GN=TIR1 PE=1 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 7.476e-44
Identity = 104/198 (52.53%), Postives = 128/198 (64.65%), Query Frame = 3
Query:   15 KLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV----DNAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYA---EQLGNAF-------LLHLLGITTRECCM*LDGLPKNSPILEIRDSPF 566
            KL+  C KL+RLW+LD I D GL V+A TCK+L+ELRVFPS       N A+TE+GLV++S GCPKL S+LYFC+QMTNAALIT+A+N  N TRFRLCI++ + PD +T++PLD GFGAIV+ CK           TD+VF YIG YA   E L  AF       + H+L      C    D L K    LEIRD PF
Sbjct:  308 KLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLS----GC----DSLRK----LEIRDCPF 493          
BLAST of EY735341 vs. ExPASy Swiss-Prot
Match: TIR1A_ORYSJ (Transport inhibitor response 1-like protein Os05g0150500 OS=Oryza sativa subsp. japonica GN=Os05g0150500 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.906e-39
Identity = 96/194 (49.48%), Postives = 119/194 (61.34%), Query Frame = 3
Query:   15 KLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVDNAA-VTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQL--------GNAFL-LHLLGITTRECCM*LDGLPKNSPILEIRDSPF 566
            K I  CR L++LW++D I D GL VVA +C +LQELRVFPS    A  +TE GLV +SA CP L S+LYFC++MTN ALIT+AKN  NFT FRLCIL+   PD +T +PLD GF AIV+SC+           TD VF  IG +A++L        GN+ L LH +          L G  K+   LEIRD PF
Sbjct:  322 KFISRCRNLQQLWVMDLIEDHGLAVVASSCNKLQELRVFPSDPFGAGFLTERGLVDVSASCPMLESVLYFCRRMTNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCRGLRRLSISGLLTDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYI----------LSGC-KSLKKLEIRDCPF 504          
BLAST of EY735341 vs. ExPASy Swiss-Prot
Match: TIR1L_ARATH (Transport inhibitor response 1-like protein OS=Arabidopsis thaliana GN=At5g49980 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.046e-37
Identity = 90/186 (48.39%), Postives = 113/186 (60.75%), Query Frame = 3
Query:   18 LIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV---DNAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLGNAFLLHLLGITTRECCM*LDGLPKNSPILEIRDSPF 566
            +I  C KL+  W LDSI D GL  VA TCKEL+ELR+FP          V+E GL AIS GC KL S+LYFCQ+MTNAA+I +++N    T FRLCI+ R +PD VT +P+DEGFGAIV++CK           TDQ F Y+G Y  +L     +   G +       L+G P+    LEIRDSPF
Sbjct:  356 IILNCHKLQVFWALDSICDEGLQAVAATCKELRELRIFPFDPREDSEGPVSELGLQAISEGCRKLESILYFCQRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTGKPMDEGFGAIVKNCKKLTRLAVSGLLTDQAFRYMGEYG-KLVRTLSVAFAGDSDMALRHVLEGCPRLQK-LEIRDSPF 539          
BLAST of EY735341 vs. ExPASy Swiss-Prot
Match: FBX14_ARATH (F-box protein FBX14 OS=Arabidopsis thaliana GN=FBX14 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.180e-35
Identity = 85/186 (45.70%), Postives = 108/186 (58.06%), Query Frame = 3
Query:   18 LIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV---DNAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLGNAFLLHLLGITTRECCM*LDGLPKNSPILEIRDSPF 566
            +I  C  +   W LDSI D GL  VA TCKEL+ELR+FP          V+  GL AIS GC KL S+LYFCQ MTN A+  +++N    T FRLCI+ R +PD VT +P+D+GFGAIV++CK           TD+ F YIG Y  +L     +   G + +     L+G PK    LEIRDSPF
Sbjct:  356 IISNCHNIRVFWALDSIRDEGLQAVAATCKELRELRIFPFDPREDSEGPVSGVGLQAISEGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGAIVKNCKKLTRLAVSGLLTDEAFSYIGEYG-KLIRTLSVAFAGNSDKALRYVLEGCPKLQK-LEIRDSPF 539          
BLAST of EY735341 vs. ExPASy Swiss-Prot
Match: GRH1_ARATH (GRR1-like protein 1 OS=Arabidopsis thaliana GN=GRH1 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.082e-34
Identity = 86/198 (43.43%), Postives = 115/198 (58.08%), Query Frame = 3
Query:   15 KLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVD----NAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQL----------GNAFLLHLLGITTRECCM*LDGLPKNSPILEIRDSPF 566
            +L+R C KL++LW++D I D+GL  VA  CKEL+ELRVFPS  D    N  +TE+GLV +S GC KL S+LYFC Q TNAAL T+A+   N   FRLC+++   PD  T +PLD+GF AI + C+           +D+ F YIG +A+++           +  L HLL      C    + L K    LEIRD PF
Sbjct:  304 ELLRRCSKLQKLWVMDLIEDKGLEAVASYCKELRELRVFPSEPDLDATNIPLTEQGLVFVSKGCRKLESVLYFCVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKTNEPLDKGFKAIAEGCRDLRRLSVSGLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLS----GC----ESLKK----LEIRDCPF 489          
BLAST of EY735341 vs. ExPASy Swiss-Prot
Match: COI1_ARATH (Coronatine-insensitive protein 1 OS=Arabidopsis thaliana GN=COI1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.796e-13
Identity = 52/153 (33.99%), Postives = 77/153 (50.33%), Query Frame = 3
Query:   18 LIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVD-------NAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCK---XXXXXXXXXXXTDQVFLYIGMYA 446
            LI+ C  LE L   + IGDRGL V+A  CK+L+ LR+   G D          V++ GL+A++ GC +L  +  +   +TN +L ++     N   FRL +LDRE  + +T  PLD G  +++  CK              TD    YIG Y+
Sbjct:  313 LIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRI-ERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDRE--ERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYS 462          
The following BLAST results are available for this feature:
BLAST of EY735341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
AFB2_ARATH4.363e-6064.62Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis tha... [more]
AFB3_ARATH2.394e-5865.08Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis tha... [more]
TIR1B_ORYSJ5.711e-5259.89Transport inhibitor response 1-like protein Os04g0... [more]
TIRC_ORYSJ1.317e-4859.67Transport inhibitor response 1-like protein Os11g0... [more]
TIR1_ARATH7.476e-4452.53Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidop... [more]
TIR1A_ORYSJ1.906e-3949.48Transport inhibitor response 1-like protein Os05g0... [more]
TIR1L_ARATH1.046e-3748.39Transport inhibitor response 1-like protein OS=Ara... [more]
FBX14_ARATH2.180e-3545.70F-box protein FBX14 OS=Arabidopsis thaliana GN=FBX... [more]
GRH1_ARATH1.082e-3443.43GRR1-like protein 1 OS=Arabidopsis thaliana GN=GRH... [more]
COI1_ARATH1.796e-1333.99Coronatine-insensitive protein 1 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-096-C09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735341 ID=EY735341; Name=EY735341; organism=Citrus sinensis; type=EST; length=606bp
CCACGCGTCCGAATAAGCTAATTCGGTTCTGCAGGAAACTTGAGCGATTA
TGGATACTGGATTCTATTGGAGACAGAGGACTAGGAGTTGTAGCTTTCAC
CTGTAAAGAATTGCAAGAATTGAGGGTTTTCCCATCTGGGGTCGACAATG
CTGCTGTAACAGAGGAAGGCCTGGTTGCCATATCAGCTGGTTGCCCGAAG
CTGCATTCATTGCTTTACTTCTGCCAGCAAATGACTAATGCCGCCCTAAT
AACTGTAGCCAAGAATAATTCAAATTTCACTCGCTTCAGATTGTGCATCC
TTGACCGTGAAAAACCTGACCCTGTCACCATGCAACCTTTGGATGAAGGT
TTTGGGGCAATTGTACAATCATGCAAGCGTCTAAGGCGATTGTCACTCTC
TGGCCTTTTAACTGACCAGGTTTTCCTTTACATTGGAATGTATGCTGAAC
AGCTGGGAAATGCTTTTCTATTGCATTTGCTGGGAATTACGACAAGGGAA
TGCTGTATGTAATTGGACGGGTTGCCAAAAAACTCCCCCATCTTGGAAAT
CAGGGACAGCCCCTTTTCGGCTAACACCAAAATTTCTGAAGGAATGGGGG
GAAAGA
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