EY735316

Overview
NameEY735316
Unique NameEY735316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length448
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8452 contig Csv1_Contig8452:35..481. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
[Close]
BLAST of EY735316 vs. ExPASy Swiss-Prot
Match: FLGH_PSEFS (Flagellar L-ring protein OS=Pseudomonas fluorescens (strain SBW25) GN=flgH PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 2.423e-72
Identity = 136/143 (95.10%), Postives = 138/143 (96.50%), Query Frame = -1 
Query:    2 QAGFEQNLYSDRKPFRVGDIITITLNEKTQASKNANSQIGKTSKTSIGLTSLFGGVPNTNNPLGSGDLSLDAGYSGDRATNGKSAAGQGNSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAGMVRADDISTDNTV 430
            QAGFEQNLYSDRK FRVGDIITITLNEKTQASKNANSQ+GKTSKT IGLTSLFG VPNTNNPLG GDLSL AGYSGDRATNGKS+AGQGNSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAGMVRADDISTDNTV
Sbjct:   51 QAGFEQNLYSDRKAFRVGDIITITLNEKTQASKNANSQVGKTSKTGIGLTSLFGAVPNTNNPLGDGDLSLSAGYSGDRATNGKSSAGQGNSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAGMVRADDISTDNTV 193
[Close]
BLAST of EY735316 vs. ExPASy Swiss-Prot
Match: FLGH_PSEPF (Flagellar L-ring protein OS=Pseudomonas fluorescens (strain Pf0-1) GN=flgH PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 2.869e-65
Identity = 124/143 (86.71%), Postives = 129/143 (90.21%), Query Frame = -1 
Query:    2 QAGFEQNLYSDRKPFRVGDIITITLNEKTQASKNANSQIGKTSKTSIGLTSLFGGVPNTNNPLGSGDLSLDAGYSGDRATNGKSAAGQGNSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAGMVRADDISTDNTV 430
            QAGFEQNLYSDRK FRVGDIITITLNE+TQASKNANSQ+ K SKT IGLTSLFGG   TNNPLG  DLSLD GYSGDRAT G S A QGN+LTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAG+VRADDI+TDNTV
Sbjct:   51 QAGFEQNLYSDRKAFRVGDIITITLNERTQASKNANSQVAKNSKTGIGLTSLFGGSATTNNPLGGNDLSLDVGYSGDRATKGDSKAAQGNTLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAGLVRADDIATDNTV 193
[Close]
BLAST of EY735316 vs. ExPASy Swiss-Prot
Match: FLGH_PSEPK (Flagellar L-ring protein OS=Pseudomonas putida (strain KT2440) GN=flgH PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 6.391e-65
Identity = 123/143 (86.01%), Postives = 130/143 (90.91%), Query Frame = -1 
Query:    2 QAGFEQNLYSDRKPFRVGDIITITLNEKTQASKNANSQIGKTSKTSIGLTSLFGGVPNTNNPLGSGDLSLDAGYSGDRATNGKSAAGQGNSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAGMVRADDISTDNTV 430
            QAGFEQNLYSDRK FRVGDIITITLNE+T ASKNA SQI KTSKT IGLTSLFG  PNTNNP G GDLSL+AGYSGDRAT G S A QGN+LTGSITVTVA+VLPNGIIAVRGEKW+TLNTG+ELVRIAGMVRADDI+TDNTV
Sbjct:   51 QAGFEQNLYSDRKAFRVGDIITITLNERTSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSGDRATKGDSKATQGNTLTGSITVTVAEVLPNGIIAVRGEKWLTLNTGEELVRIAGMVRADDIATDNTV 193
[Close]
BLAST of EY735316 vs. ExPASy Swiss-Prot
Match: FLGH_PSEP1 (Flagellar L-ring protein OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=flgH PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 1.424e-64
Identity = 122/143 (85.31%), Postives = 130/143 (90.91%), Query Frame = -1 
Query:    2 QAGFEQNLYSDRKPFRVGDIITITLNEKTQASKNANSQIGKTSKTSIGLTSLFGGVPNTNNPLGSGDLSLDAGYSGDRATNGKSAAGQGNSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAGMVRADDISTDNTV 430
            QAGFEQNLYSDRK FRVGDIITITLNE+T ASKNA SQI KTSKT IGLTSLFG  PNTNNP G GDLSL+AGYSGDRAT G S A QGN+LTGSITVTVA+VLPNGIIAVRGEKW+TLNTG+ELVRIAGM+RADDI+TDNTV
Sbjct:   51 QAGFEQNLYSDRKAFRVGDIITITLNERTSASKNAGSQIAKTSKTDIGLTSLFGTTPNTNNPFGGGDLSLEAGYSGDRATKGDSKATQGNTLTGSITVTVAEVLPNGIIAVRGEKWLTLNTGEELVRIAGMIRADDIATDNTV 193
[Close]
BLAST of EY735316 vs. ExPASy Swiss-Prot
Match: FLGH_PSEF5 (Flagellar L-ring protein OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=flgH PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 9.229e-64
Identity = 122/143 (85.31%), Postives = 129/143 (90.21%), Query Frame = -1 
Query:    2 QAGFEQNLYSDRKPFRVGDIITITLNEKTQASKNANSQIGKTSKTSIGLTSLFGGVPNTNNPLGSGDLSLDAGYSGDRATNGKSAAGQGNSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAGMVRADDISTDNTV 430
            QAGFEQNLYSDRK FRVGDIITITLNE+T ASK ANS + KTS  SIGLTSLFG VPNTNNPLG GDL+L+AGYSG+RAT G S A Q NSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAG+VRADDI+TDNTV
Sbjct:   51 QAGFEQNLYSDRKAFRVGDIITITLNERTNASKGANSALTKTSSNSIGLTSLFGAVPNTNNPLGDGDLTLNAGYSGNRATKGDSKAAQSNSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAGLVRADDIATDNTV 193
[Close]
BLAST of EY735316 vs. ExPASy Swiss-Prot
Match: FLGH_PSEPG (Flagellar L-ring protein OS=Pseudomonas putida (strain GB-1) GN=flgH PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 4.580e-63
Identity = 120/143 (83.92%), Postives = 128/143 (89.51%), Query Frame = -1 
Query:    2 QAGFEQNLYSDRKPFRVGDIITITLNEKTQASKNANSQIGKTSKTSIGLTSLFGGVPNTNNPLGSGDLSLDAGYSGDRATNGKSAAGQGNSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAGMVRADDISTDNTV 430
            QAGFEQNLYSDRK FRVGDIITITLNEKT ASKNA SQI K SK  IGLTSLFG  PNTNNP G GDLSL+AGY+G+RAT G S A QGN+LTGSITVTVA+VLPNGIIAVRGEKW+TLNTG+ELVRIAGMVRADDI+TDNTV
Sbjct:   51 QAGFEQNLYSDRKAFRVGDIITITLNEKTSASKNAGSQIQKNSKADIGLTSLFGSTPNTNNPFGGGDLSLEAGYNGERATKGDSKATQGNTLTGSITVTVAEVLPNGIIAVRGEKWLTLNTGEELVRIAGMVRADDIATDNTV 193
[Close]
BLAST of EY735316 vs. ExPASy Swiss-Prot
Match: FLGH_PSEPW (Flagellar L-ring protein OS=Pseudomonas putida (strain W619) GN=flgH PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 2.969e-62
Identity = 118/143 (82.52%), Postives = 129/143 (90.21%), Query Frame = -1 
Query:    2 QAGFEQNLYSDRKPFRVGDIITITLNEKTQASKNANSQIGKTSKTSIGLTSLFGGVPNTNNPLGSGDLSLDAGYSGDRATNGKSAAGQGNSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAGMVRADDISTDNTV 430
            QAGFEQNLYSDRK FRVGDIITITLNE+T ASKNA SQI K S  +IGLTSLFG  P+TNNP GSGDLSL+AGYSG+RAT G S A QGN+LTGSITVTVA+VLPNGIIAVRGEKWMTLNTG+ELVRIAG++RADDI+TDNTV
Sbjct:   51 QAGFEQNLYSDRKAFRVGDIITITLNERTSASKNAGSQIQKDSSANIGLTSLFGATPSTNNPFGSGDLSLEAGYSGERATKGDSKATQGNTLTGSITVTVAEVLPNGIIAVRGEKWMTLNTGEELVRIAGLIRADDIATDNTV 193
[Close]
BLAST of EY735316 vs. ExPASy Swiss-Prot
Match: FLGH_PSEE4 (Flagellar L-ring protein OS=Pseudomonas entomophila (strain L48) GN=flgH PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 6.614e-62
Identity = 118/143 (82.52%), Postives = 127/143 (88.81%), Query Frame = -1 
Query:    2 QAGFEQNLYSDRKPFRVGDIITITLNEKTQASKNANSQIGKTSKTSIGLTSLFGGVPNTNNPLGSGDLSLDAGYSGDRATNGKSAAGQGNSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAGMVRADDISTDNTV 430
            QAGFEQ+LY+DRK FRVGDIITITLNE+T ASKNA SQI K SK  IGLTSLFG  PNTNNP G GDLSL+AGYSGDR T G S A QGN+LTGSITVTVA+VLPNGIIAVRGEKWMTLNTG+ELVRIAG+VRADDI+TDNTV
Sbjct:   51 QAGFEQSLYTDRKAFRVGDIITITLNERTSASKNAGSQIQKNSKADIGLTSLFGSSPNTNNPFGGGDLSLEAGYSGDRTTKGDSKATQGNTLTGSITVTVAEVLPNGIIAVRGEKWMTLNTGEELVRIAGLVRADDIATDNTV 193
[Close]
BLAST of EY735316 vs. ExPASy Swiss-Prot
Match: FLGH_PSEAE (Flagellar L-ring protein OS=Pseudomonas aeruginosa GN=flgH PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 5.794e-58
Identity = 113/143 (79.02%), Postives = 121/143 (84.62%), Query Frame = -1 
Query:    2 QAGFEQNLYSDRKPFRVGDIITITLNEKTQASKNANSQIGKTSKTSIGLTSLFGGVPNTNNPLGSGDLSLDAGYSGDRATNGKSAAGQGNSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAGMVRADDISTDNTV 430
            QAGFEQNLY DRK FRVGDIITITLNEKTQASK ANS I K SKT +GLTSLFG    TNNP+G GDLSL A Y G R   G S AGQ NSLTGSITVTVA+VLPNGI++VRGEKWMTLNTG+ELVRIAG+VRADDI+TDNTV
Sbjct:   51 QAGFEQNLYDDRKAFRVGDIITITLNEKTQASKKANSDIQKDSKTKMGLTSLFGSGMTTNNPIGGGDLSLSAEYGGSRDAKGDSQAGQSNSLTGSITVTVAEVLPNGILSVRGEKWMTLNTGNELVRIAGLVRADDIATDNTV 193
[Close]
BLAST of EY735316 vs. ExPASy Swiss-Prot
Match: FLGH_PSEAB (Flagellar L-ring protein OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=flgH PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 5.794e-58
Identity = 113/143 (79.02%), Postives = 121/143 (84.62%), Query Frame = -1 
Query:    2 QAGFEQNLYSDRKPFRVGDIITITLNEKTQASKNANSQIGKTSKTSIGLTSLFGGVPNTNNPLGSGDLSLDAGYSGDRATNGKSAAGQGNSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAGMVRADDISTDNTV 430
            QAGFEQNLY DRK FRVGDIITITLNEKTQASK ANS I K SKT +GLTSLFG    TNNP+G GDLSL A Y G R   G S AGQ NSLTGSITVTVA+VLPNGI++VRGEKWMTLNTG+ELVRIAG+VRADDI+TDNTV
Sbjct:   51 QAGFEQNLYDDRKAFRVGDIITITLNEKTQASKKANSDIQKDSKTKMGLTSLFGSGMTTNNPIGGGDLSLSAEYGGSRDAKGDSQAGQSNSLTGSITVTVAEVLPNGILSVRGEKWMTLNTGNELVRIAGLVRADDIATDNTV 193
The following BLAST results are available for this feature:
BLAST of EY735316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
FLGH_PSEFS2.423e-7295.10Flagellar L-ring protein OS=Pseudomonas fluorescen... [more]
FLGH_PSEPF2.869e-6586.71Flagellar L-ring protein OS=Pseudomonas fluorescen... [more]
FLGH_PSEPK6.391e-6586.01Flagellar L-ring protein OS=Pseudomonas putida (st... [more]
FLGH_PSEP11.424e-6485.31Flagellar L-ring protein OS=Pseudomonas putida (st... [more]
FLGH_PSEF59.229e-6485.31Flagellar L-ring protein OS=Pseudomonas fluorescen... [more]
FLGH_PSEPG4.580e-6383.92Flagellar L-ring protein OS=Pseudomonas putida (st... [more]
FLGH_PSEPW2.969e-6282.52Flagellar L-ring protein OS=Pseudomonas putida (st... [more]
FLGH_PSEE46.614e-6282.52Flagellar L-ring protein OS=Pseudomonas entomophil... [more]
FLGH_PSEAE5.794e-5879.02Flagellar L-ring protein OS=Pseudomonas aeruginosa... [more]
FLGH_PSEAB5.794e-5879.02Flagellar L-ring protein OS=Pseudomonas aeruginosa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-G10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735316 ID=EY735316; Name=EY735316; organism=Citrus sinensis; type=EST; length=448bp
GCACGGTGTTGTCGGTGGAGATATCGTCGGCGCGAACCATGCCCGCAATG
CGCACCAGTTCGTCACCGGTGTTGAGGGTCATCCACTTCTCGCCGCGTAC
GGCAATGATGCCGTTGGGCAGCACGTCGGCCACGGTCACGGTGATCGAAC
CGGTCAGGCTGTTGCCCTGGCCCGCCGCACTTTTGCCGTTGGTGGCGCGG
TCGCCGCTGTAACCGGCGTCCAGGCTCAGATCACCACTGCCCAGCGGGTT
GTTGGTGTTCGGTACACCGCCAAACAACGAGGTCAGGCCGATGCTGGTCT
TGCTGGTCTTGCCGATCTGCGAGTTGGCGTTCTTGCTCGCCTGGGTCTTC
TCGTTCAGCGTGATGGTGATGATGTCACCCACCCGGAAGGGCTTGCGGTC
GCTGTACAGGTTCTGTTCAAAACCGGCCTGGGAAGATCGAGCCATTGT
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