EY735293

Overview
NameEY735293
Unique NameEY735293
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1078
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY735293 vs. ExPASy Swiss-Prot
Match: SLSG3_BRAOL (S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 3.014e-12
Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 3 
Query:  213 DTITSSQSL--SDGRTLVSKDGSFELGFFSPGSSKNRYVGIWYKNMPVKTVVWVANRINPINDSSGLLVVN 419
            +T++S++SL  S  RTLVS    FELGFF   SS   Y+GIWYK  P +T VWVANR NP+++  G L ++
Sbjct:   33 NTLSSTESLTISSNRTLVSPGNVFELGFFKTTSSSRWYLGIWYKKFPYRTYVWVANRDNPLSNDIGTLKIS 103
[Close]
BLAST of EY735293 vs. ExPASy Swiss-Prot
Match: SLSG6_BRAOL (S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.145e-11
Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = 3 
Query:  213 DTITSSQSL--SDGRTLVSKDGSFELGFFSPGSSKNRYVGIWYKNMPVKTVVWVANRINPINDSSGLLVVN 419
            +T++S++SL  S  RTLVS   +FELGFF   SS   Y+GIWYK +  +T VWVANR NP++++ G L ++
Sbjct:   33 NTLSSTESLRISSNRTLVSPGNNFELGFFRTNSSSRWYLGIWYKKLLDRTYVWVANRDNPLSNAIGTLKIS 103
[Close]
BLAST of EY735293 vs. ExPASy Swiss-Prot
Match: SLSG4_BRAOL (S-locus-specific glycoprotein S14 (Fragment) OS=Brassica oleracea GN=SLSG PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.552e-11
Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 3 
Query:  213 DTITSSQSL--SDGRTLVSKDGSFELGFFSPGSSKNRYVGIWYKNMPVKTVVWVANRINPINDSSGLLVVN 419
            +T++S +SL  S  RTLVS    FELGFF   SS   Y+GIWYK +  +T VWVANR NP++ S G L ++
Sbjct:   30 NTLSSIESLTISSNRTLVSPGNVFELGFFRTNSSSRWYLGIWYKKVSDRTYVWVANRDNPLSSSIGTLKIS 100
The following BLAST results are available for this feature:
BLAST of EY735293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SLSG3_BRAOL3.014e-1250.70S-locus-specific glycoprotein S13 OS=Brassica oler... [more]
SLSG6_BRAOL1.145e-1149.30S-locus-specific glycoprotein S6 OS=Brassica olera... [more]
SLSG4_BRAOL2.552e-1150.70S-locus-specific glycoprotein S14 (Fragment) OS=Br... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-D04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735293 ID=EY735293; Name=EY735293; organism=Citrus sinensis; type=EST; length=1078bp
ACGGCGGTCCGGTCGGGATTCCCGGGTCGACCCCGCGTCCGTTTCAGGTC
AGTGCCCTCCAAGATGGATTATCAGTCATGGTGTTTAATTATATTTATTT
AATTTGTTAGAGAGAGCTCTACGCCTATAGAGTATAACAAATGGATGTAC
TTTTGTTTTCGTTCATCTGTTGTAAGTTACTGTTTTTCTTGTCTGAATCC
TCTTTCGCTTCCGACACCATTACTTCATCTCAGTCCCTCAGTGATGGCAG
GACCTTAGTTTCAAAAGATGGAAGCTTTGAGCTTGGTTTCTTCAGTCCTG
GTAGTTCCAAGAATCGTTACGTGGGAATTTGGTACAAAAATATGCCAGTT
AAAACTGTTGTTTGGGTTGCAAACAGAATCAACCCCATTAATGACTCTTC
TGGGTTGTTAGTTGTAAACGAGACGGGCAATCTTGTTTTTAACAAGCCAG
AACAAGAGTGTAGTTTGGTCAGCAAACTTGAGCAAAGAAGTTTCGGACTC
CAGTTGTATTGCAACTACTAGAATTCAGGAAAATCTTGTCCTCAAAGGGC
AAACAAAATGGCGGTTCTGAAACTTTATTTTTGGGCAAAGCTTTGATTAT
CCCTTCTGATACATTTGCTACCCAGAAATGAAATTTTGGGATGGGAATTT
GAAAACGGGTCTTTGGACCGGGGAAAAAACCTCCGGGAAAAACCCCCAAA
CAAACCCGCCCCCCGGGAAAAACTTTTTTTTTTGGGCGAATTGAAAAAAA
AAAAAAAAATCCCGGAGTTTTAATACTGGGGGGAAAGGGGAATCAAAAAA
AATTTTTCAAAGAGAGGGGGCCCCGGGGAAAGGGGCTTTAAAATTTCAGG
GGGTTTTTCTTCTTAAAGGGCCCAAACCCCCCCTTTTTTTTAACTTTGCG
GGCTTTTTTCGCCCCAATAAGAGGGGTGTAAAACCGGGAAAACAAAAAAA
TATTTTGACAAGAGAGGAAAAAAAAAAAAAGGGCGCTTTTTTTCTCCCAA
AGGGGGTATTTTTTTTGTTAAAGAAAAAACAAAAAAAACAACCCCCTCTC
TTTTTTTTTTTTATGTTATTCTCACCCC
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