EY735290

Overview
NameEY735290
Unique NameEY735290
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length964
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735290 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 2.237e-42
Identity = 71/140 (50.71%), Postives = 102/140 (72.86%), Query Frame = 3
Query:   33 EETVLSKDRASWWKQLCILSHRSFLNMLRDMGYYWLRIVFYVLVSITVGILYLNVGLSNPAIYGRPKCVAFIYGFLICLSVGGLPSFIEEHKASYRERISCHYGEAVFVLSNFLSSFPFLVILSISSGTILHYMVQFHPG 452
            E  +     A+WWKQL  L+ RSF+NM RD+GYYW RI+ Y++VSI+VG ++ +VG S  +I  R  C  FI GF+  +S+GG PSF+EE K  Y+ER+S +YG +V++LSN++SSFPFLV +S+ +GTI + +V+F PG
Sbjct:  347 EMEIRKGSEATWWKQLRTLTARSFINMCRDVGYYWTRIISYIVVSISVGTIFYDVGYSYTSILARVSCGGFITGFMTFMSIGGFPSFLEEMKVFYKERLSGYYGVSVYILSNYISSFPFLVAISVITGTITYNLVKFRPG 486          

HSP 2 Score: 36.5798 bits (83), Expect = 2.237e-42
Identity = 15/30 (50.00%), Postives = 22/30 (73.33%), Query Frame = 1
Query:  442 FIQDFSHYCHFCLSLFCCVSIVKTCVMVVA 531
            F   FSHY  FCL++F  VS++++ +MVVA
Sbjct:  483 FRPGFSHYAFFCLNIFFSVSVIESLMMVVA 512          
BLAST of EY735290 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.353e-38
Identity = 68/131 (51.91%), Postives = 98/131 (74.81%), Query Frame = 3
Query:   60 ASWWKQLCILSHRSFLNMLRDMGYYWLRIVFYVLVSITVGILYLNVGLSNPAIYGRPKCVAFIYGFLICLSVGGLPSFIEEHKASYRERISCHYGEAVFVLSNFLSSFPFLVILSISSGTILHYMVQFHPG 452
            A+W+KQL  L+ RSF+NM RD+GYYW RIV Y++VS  VG ++ +VG S  +I  R  C  FI GF+  +S+GG PSFIEE K  Y+ER+S +YG +V+++SN++SSFPFLV +++ +G+I + MV+F PG
Sbjct:  357 ATWFKQLRTLTKRSFVNMCRDIGYYWSRIVIYIVVSFCVGTIFYDVGHSYTSILARVSCGGFITGFMTFMSIGGFPSFIEEMKVFYKERLSGYYGVSVYIISNYVSSFPFLVAIALITGSITYNMVKFRPG 487          

HSP 2 Score: 31.9574 bits (71), Expect = 2.353e-38
Identity = 12/25 (48.00%), Postives = 20/25 (80.00%), Query Frame = 1
Query:  457 SHYCHFCLSLFCCVSIVKTCVMVVA 531
            SH+  FCL++F  VS++++ +MVVA
Sbjct:  489 SHWAFFCLNIFFSVSVIESLMMVVA 513          
BLAST of EY735290 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.747e-36
Identity = 63/132 (47.73%), Postives = 93/132 (70.45%), Query Frame = 3
Query:   57 RASWWKQLCILSHRSFLNMLRDMGYYWLRIVFYVLVSITVGILYLNVGLSNPAIYGRPKCVAFIYGFLICLSVGGLPSFIEEHKASYRERISCHYGEAVFVLSNFLSSFPFLVILSISSGTILHYMVQFHPG 452
            + +WWKQL IL+ RSF+NM RD+GYYW+RI  Y+++SI VG ++ NVG ++  +     C  F+ GF+  +S+GG  SFIEE K   RER++ HYG AV+ +SN LSS PF++++ +S+ +I  YMV+F  G
Sbjct:  350 QTNWWKQLRILTQRSFINMSRDLGYYWMRIAVYIVLSICVGSIFFNVGRNHTNVMSTAACGGFMAGFMTFMSIGGFQSFIEEMKVFSRERLNGHYGVAVYTVSNLLSSLPFIILMCLSTSSITIYMVRFQSG 481          

HSP 2 Score: 31.5722 bits (70), Expect = 2.747e-36
Identity = 10/25 (40.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:  457 SHYCHFCLSLFCCVSIVKTCVMVVA 531
            SH+ + CL L C ++ V++C+M++A
Sbjct:  483 SHFFYNCLDLICAITTVESCMMMIA 507          
BLAST of EY735290 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.262e-35
Identity = 83/215 (38.60%), Postives = 120/215 (55.81%), Query Frame = 3
Query:   57 RASWWKQLCILSHRSFLNMLRDMGYYWLRIVFYVLVSITVGILYLNVGLSNPAIYGRPKCVAFIYGFLICLSVGGLPSFIEEHKASYRERISCHYGEAVFVLSNFLSSFPFLVILSISSGTILHYMVQFHPGXXXXXXXXXXXXXXXXNREDLRDGCCIVWYLMVFDGEIGVGNWF***LMMMGVSPFFKKVGFLNLSPSPFWAIIQNGLTSTFW 701
            +AS+  Q   L+ RSF+NM RD GYYWLR++ Y+LV++ +G +YLNVG S  AI  R  C +F++GF+  +S+GG PSF+E+ K   RER++ HYG A FV++N LS+ PFL++++  SGTI ++MV  HPG                  E L      +    +    IG G       + M VS FF+     N  P PFW    + ++  FW
Sbjct:  377 QASFLLQTYTLTKRSFINMSRDFGYYWLRLLIYILVTVCIGTIYLNVGTSYSAILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVAAFVIANTLSATPFLIMITFISGTICYFMVGLHPGFTHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQG----IFMLVSGFFR---LPNDIPKPFWRYPMSYISFHFW 584          
The following BLAST results are available for this feature:
BLAST of EY735290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
AB15G_ARATH2.237e-4250.71ABC transporter G family member 15 OS=Arabidopsis ... [more]
AB12G_ARATH2.353e-3851.91ABC transporter G family member 12 OS=Arabidopsis ... [more]
AB13G_ARATH2.747e-3647.73ABC transporter G family member 13 OS=Arabidopsis ... [more]
AB11G_ARATH1.262e-3538.60ABC transporter G family member 11 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735290 ID=EY735290; Name=EY735290; organism=Citrus sinensis; type=EST; length=964bp
AATACATTTACGACTGAATGTTTCAGGAACAAGAGGAGACTGTATTGAGC
AAGGACAGGGCAAGCTGGTGGAAGCAGCTCTGCATATTGAGTCATCGGTC
GTTCCTAAACATGTTAAGAGATATGGGATACTACTGGTTAAGGATAGTCT
TCTACGTTCTAGTGTCAATAACTGTTGGCATTCTGTATCTCAATGTCGGA
TTATCCAACCCTGCAATCTACGGGAGGCCAAAGTGCGTAGCGTTCATTTA
TGGTTTCTTGATTTGCTTGTCAGTAGGAGGCTTACCATCTTTCATTGAAG
AGCACAAGGCTTCATACCGCGAAAGAATCAGCTGCCATTATGGAGAGGCT
GTGTTTGTACTGTCAAACTTCCTCTCATCGTTCCCTTTCCTGGTGATATT
GTCCATATCTTCAGGAACAATATTGCACTATATGGTGCAATTTCATCCAG
GATTTTTCCCACTACTGCCATTTCTGTCTCAGTCTTTTCTGCTGCGTTTC
AATCGTGAAGACTTGCGTGATGGTTGTTGCATTGTTTGGTACCTAATGGT
TTTTGATGGGGAAATAGGAGTTGGGAACTGGTTCTAATAGTAACTTATGA
TGATGGGTGTCTCCCCGTTTTTTAAAAAGGTGGGTTTTCTGAATCTTTCC
CCAAGTCCTTTCTGGGCAATAATCCAAAATGGCCTAACTTCCACTTTTTG
GCTACATGGGGCAATAAAGGGGGCCAGTTTCAAGAAAGGACATTATACGG
GGTTCCAAGTTTTGAATTCTGGCGGGTCCCTGGGGGAACCCAAAACTTTA
AGGGGGAAAGAGAAATTTTTCCTGGGAAATTTTTATGGGGGGTTTACAGT
TGAGAATATTTCGGCAAAGGGGGGGGGGGGTATTTGGGCACCCTTCTCTT
TTCCCCTACAACACGGAGAAATGGCCTAACAAAAGATTGTGTATTTTATT
TGTGCCCACAACAT
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