EY735247

Overview
NameEY735247
Unique NameEY735247
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735247 vs. ExPASy Swiss-Prot
Match: SORCN_SCHJA (Sorcin OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.210e-16
Identity = 52/161 (32.30%), Postives = 84/161 (52.17%), Query Frame = 1
Query:   10 ETAVLREWFDRVDSEKTGSIAAAQLKHAFAVG-NLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERGRGYLVPDNVY-EALVKIGFSLDSPAFYTVCESFDQNKNGRLRLDDFISLCIFLQSARNLFNSFDTAKQGRITLDLNQFI 486
            +T  LR  F RVD++K+GSI+A +L+ + + G     ++  VQ M+ M+D D NGT++F EF+ L K++   Q  F   +R     +  N +  AL+  G+ L       +   FD+N+ G +  DDFI  C+ LQ+    F+ +D    G       QF+
Sbjct:    4 DTNSLRHIFSRVDADKSGSISANELQTSLSNGLGTPLNIRTVQLMVAMFDRDMNGTINFNEFLGLFKYVQDWQTCFRRYDRDNSGSIDLNEFSNALISFGYHLSPQFVNLMMRRFDRNR-GSIAFDDFIYACVCLQTLTREFSRYDCRGIGHTVFSFEQFL 163          
BLAST of EY735247 vs. ExPASy Swiss-Prot
Match: PDCD6_HUMAN (Programmed cell death protein 6 OS=Homo sapiens GN=PDCD6 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.322e-13
Identity = 43/153 (28.10%), Postives = 78/153 (50.98%), Query Frame = 1
Query:   34 FDRVDSEKTGSIAAAQLKHAFAVGN-LDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERGRGYLVPDN-VYEALVKIGFSLDSPAFYTVCESFDQNKNGRLRLDDFISLCIFLQSARNLFNSFDTAKQGRITLDLNQFI 486
            F RVD +++G I+  +L+ A + G    F+   V+ +I M+D +    ++F EF  + K++   Q+ F   +R    ++  N + +AL   G+ L       +   FD+   G++  DDFI  CI LQ   ++F  +DT + G I +   Q++
Sbjct:   32 FQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYL 184          
BLAST of EY735247 vs. ExPASy Swiss-Prot
Match: PDCD6_MOUSE (Programmed cell death protein 6 OS=Mus musculus GN=Pdcd6 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.667e-13
Identity = 43/153 (28.10%), Postives = 78/153 (50.98%), Query Frame = 1
Query:   34 FDRVDSEKTGSIAAAQLKHAFAVGN-LDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERGRGYLVPDN-VYEALVKIGFSLDSPAFYTVCESFDQNKNGRLRLDDFISLCIFLQSARNLFNSFDTAKQGRITLDLNQFI 486
            F RVD +++G I+  +L+ A + G    F+   V+ +I M+D +    ++F EF  + K++   Q+ F   +R    ++  N + +AL   G+ L       +   FD+   G++  DDFI  CI LQ   ++F  +DT + G I +   Q++
Sbjct:   32 FQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYL 184          
BLAST of EY735247 vs. ExPASy Swiss-Prot
Match: PEF1_HUMAN (Peflin OS=Homo sapiens GN=PEF1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12
Identity = 52/161 (32.30%), Postives = 80/161 (49.69%), Query Frame = 1
Query:   31 WFDRVDSEKTGSIAAAQLKHAFAVGN-LDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERGR-GYLVPDNVYEALVKIGFSLDSPAF--YTVCESFDQNKNGRLRLDDFISLCIFLQSARNLFNSFDTAKQGRITLDLNQFIFCTAN 501
            WF  VDS+ +G I+  +LK A    N   F+      MI M+D  ++G +    F  L KF+ + ++ F   +R R G +    + +AL ++G++L SP F    V     ++ N  ++LD FI +C  LQ     F   DTA QG I L    F+  TA+
Sbjct:  122 WFQSVDSDHSGYISMKELKQALVNCNWSSFNDETCLMMINMFDKTKSGRIDVYGFSALWKFIQQWKNLFQQYDRDRSGSISYTELQQALSQMGYNL-SPQFTQLLVSRYCPRSANPAMQLDRFIQVCTQLQVLTEAFREKDTAVQGNIRLSFEDFVTMTAS 281          
BLAST of EY735247 vs. ExPASy Swiss-Prot
Match: SORCN_PONAB (Sorcin OS=Pongo abelii GN=SRI PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12
Identity = 47/150 (31.33%), Postives = 75/150 (50.00%), Query Frame = 1
Query:   61 GSIAAAQLKHAF-----AVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERGR-GYLVPDNVYEALVKIGFSLDSPAFYTVCESFDQNKNGRLRLDDFISLCIFLQSARNLFNSFDTAKQGRITLDLNQFIFC 492
            G I A +L+        A G   F+L   + M+ M D D +GTM F EF EL   L   +  F   +  R G + P  + +AL  +GF L   A  ++ + +  + NG++  DD+I+ C+ L++  + F   DTA+QG +    + FI C
Sbjct:   47 GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQC 194          
BLAST of EY735247 vs. ExPASy Swiss-Prot
Match: SORCN_HUMAN (Sorcin OS=Homo sapiens GN=SRI PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12
Identity = 47/150 (31.33%), Postives = 75/150 (50.00%), Query Frame = 1
Query:   61 GSIAAAQLKHAF-----AVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERGR-GYLVPDNVYEALVKIGFSLDSPAFYTVCESFDQNKNGRLRLDDFISLCIFLQSARNLFNSFDTAKQGRITLDLNQFIFC 492
            G I A +L+        A G   F+L   + M+ M D D +GTM F EF EL   L   +  F   +  R G + P  + +AL  +GF L   A  ++ + +  + NG++  DD+I+ C+ L++  + F   DTA+QG +    + FI C
Sbjct:   47 GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQC 194          
BLAST of EY735247 vs. ExPASy Swiss-Prot
Match: PEFB_DICDI (Penta-EF hand domain-containing protein 2 OS=Dictyostelium discoideum GN=pefB PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.396e-11
Identity = 40/154 (25.97%), Postives = 80/154 (51.95%), Query Frame = 1
Query:   22 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERG-RGYLVPDNVYEALVKIGFSLDSPAFYTVCESFDQNKNGRLRLDDFISLCIFLQSARNLFNSFDTAKQGRITLDLNQ 480
            ++ WF RVD+ ++G+I++ +L++   +G     +    ++I+++D ++NG + F E+  L++F+  +   F   +R   G +  + +Y AL+  GF L  P    +      +  G L    F++LC  +   R+LF   D  + G + L+L Q
Sbjct:   46 MQSWFMRVDANRSGTISSGELQY-LNIGGTPLGIETATKLIKVFDHNKNGQIDFYEYAALHQFINNLYRCFVANDRNFSGTIDANEIYNALITSGFQLPFPTVNYLFLKLSPSGYG-LLFTQFLNLCATVALTRSLFEWNDPMRTGVVHLNLAQ 197          
BLAST of EY735247 vs. ExPASy Swiss-Prot
Match: PEF1_MOUSE (Peflin OS=Mus musculus GN=Pef1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11
Identity = 51/161 (31.68%), Postives = 79/161 (49.07%), Query Frame = 1
Query:   31 WFDRVDSEKTGSIAAAQLKHAFAVGNLD-FSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERGR-GYLVPDNVYEALVKIGFSLDSPAF--YTVCESFDQNKNGRLRLDDFISLCIFLQSARNLFNSFDTAKQGRITLDLNQFIFCTAN 501
            WF  VD++ +G I+  +LK A    N   F+      MI M+D  ++G +    F  L KFL + ++ F   +R R G +    + +AL ++G++L SP F    V     ++    ++LD FI +C  LQ     F   DTA QG I L    F+  TA+
Sbjct:  113 WFQSVDADHSGYISLKELKQALVNSNWSSFNDETCLMMINMFDKTKSGRIDVAGFSALWKFLQQWRNLFQQYDRDRSGSISSTELQQALSQMGYNL-SPQFTQLLVSRYCARSAIPAMQLDCFIKVCTQLQVLTEAFREKDTAVQGNIRLSFEDFVTMTAS 272          
BLAST of EY735247 vs. ExPASy Swiss-Prot
Match: PEFA_DICDI (Penta-EF hand domain-containing protein 1 OS=Dictyostelium discoideum GN=pefA PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.381e-11
Identity = 46/152 (30.26%), Postives = 80/152 (52.63%), Query Frame = 1
Query:   31 WFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERGR-GYLVPDNVYEALVKIGFSLDSPAFYTVCESF--DQNKNGRLRLDDFISLCIFLQSARNLFNSFDTAKQGRITLDLN 477
            WF  +D +++GSI+A +L+H   VG     +    ++IR++D D++G + F E+  L++F+  +   F   +R R G +    ++ AL   GF+L    F TV   F     +   L+  DF+ LC  +  AR+LF + D  + G   L++N
Sbjct:   41 WFRSIDKDRSGSISAMELQHLH-VGYGPLGIETATKLIRVFDVDKSGQIDFYEYAALHQFINILYANFLANDRNRSGTIDAQEIHRALGTSGFNLP---FNTVNLLFLKASPRGYGLKFSDFLGLCASIAIARSLFEAHDRMRTGVAHLNVN 188          
BLAST of EY735247 vs. ExPASy Swiss-Prot
Match: PEF1_DANRE (Peflin OS=Danio rerio GN=pef1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.381e-11
Identity = 45/156 (28.85%), Postives = 76/156 (48.72%), Query Frame = 1
Query:   28 EWFDRVDSEKTGSIAAAQLKHAFA-VGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERGR-GYLVPDNVYEALVKIGFSLDSPAFYTVCESFD-QNKNGRLRLDDFISLCIFLQSARNLFNSFDTAKQGRITLDLNQFI 486
            +WF  VDS+++G I A +LK A     N  F+      M+ M+D  ++G +    F  L  FL + + AF   +R R G +  + +++AL ++G++L       +   +  +   G L+LD FI +C  LQS    F   DT   G + +    F+
Sbjct:  107 QWFSTVDSDQSGYINAKELKQALMNFNNSSFNDETCIMMLNMFDKTKSGRVDVFGFSALWTFLQQWRAAFQQFDRDRSGSINTNEMHQALSQMGYNLSPQFIQELVNRYSVRGGTGVLQLDRFIQVCTQLQSMTQAFREKDTGMTGNVRMSYEDFL 262          
The following BLAST results are available for this feature:
BLAST of EY735247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
SORCN_SCHJA3.210e-1632.30Sorcin OS=Schistosoma japonicum PE=2 SV=1[more]
PDCD6_HUMAN3.322e-1328.10Programmed cell death protein 6 OS=Homo sapiens GN... [more]
PDCD6_MOUSE5.667e-1328.10Programmed cell death protein 6 OS=Mus musculus GN... [more]
PEF1_HUMAN3.673e-1232.30Peflin OS=Homo sapiens GN=PEF1 PE=1 SV=1[more]
SORCN_PONAB6.265e-1231.33Sorcin OS=Pongo abelii GN=SRI PE=2 SV=1[more]
SORCN_HUMAN6.265e-1231.33Sorcin OS=Homo sapiens GN=SRI PE=1 SV=1[more]
PEFB_DICDI1.396e-1125.97Penta-EF hand domain-containing protein 2 OS=Dicty... [more]
PEF1_MOUSE1.823e-1131.68Peflin OS=Mus musculus GN=Pef1 PE=2 SV=1[more]
PEFA_DICDI2.381e-1130.26Penta-EF hand domain-containing protein 1 OS=Dicty... [more]
PEF1_DANRE2.381e-1128.85Peflin OS=Danio rerio GN=pef1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-110-F05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735247 ID=EY735247; Name=EY735247; organism=Citrus sinensis; type=EST; length=860bp
GAAAATGGAGAAACAGCCGTTTTGAGAGAGTGGTTCGATCGAGTTGACTC
AGAAAAAACAGGAAGCATAGCAGCAGCTCAGCTCAAGCACGCTTTCGCCG
TTGGCAATCTTGATTTTTCTCTCTCTGTTGTTCAACAAATGATCAGGATG
TATGATTTTGATAGGAATGGTACTATGAGCTTTGAGGAATTTGTGGAGCT
TAACAAGTTCCTTCTAAAGGTTCAACATGCCTTCTCAGACCTGGAGAGGG
GTCGTGGATATCTTGTTCCCGATAACGTGTATGAGGCATTGGTGAAAATT
GGTTTTTCTTTGGACTCACCAGCTTTTTACACAGTCTGTGAGAGTTTTGA
TCAGAATAAGAATGGAAGACTTCGTCTGGATGACTTCATATCCCTTTGTA
TATTTTTGCAGTCTGCTCGGAATCTGTTTAATTCATTTGATACAGCTAAG
CAGGGCAGGATCACTCTTGATCTCAACCAGTTTATCTTTTGTACTGCCAA
TTGTAAAATATGAAATCAAATTCTTGCTGGCCAGTAAGTAAGGGGGCCTG
GTGGATGGCTCCGTATATCATGGACTTACTTGTATAGTTATATTCTCTCC
CTATTAAAATTTTTATTCTTTTTTCTCTTCCCCATTTTTTGGCTTTGGAT
TAAGGATTAACTTATTGCTTTTGAAGGATTTATTTCACAAAAACTACGGA
GGAATCCGAGTTAAGGTGCCTAACAGAACATTGCAGAGAAATTTACACAG
GAAGAACACAACAGAAAACAAAAGGAAAACGGAGGGGCACGAAGCCGGAG
CAGCGCAGTTATAGGAAGCAAAAGGGAGGACGCAACTGCGACTGACCCAA
AAACCAACCC
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