EY735171

Overview
NameEY735171
Unique NameEY735171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735171 vs. ExPASy Swiss-Prot
Match: HD1_BRANA (Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.444e-16
Identity = 63/159 (39.62%), Postives = 83/159 (52.20%), Query Frame = 1
Query:  286 LCTFSGVSLGEGTGATMSDDEDDLHM---XXXXXXXXXXXXXXMGFGPLLPTETERSLMERS*TGVED*TETGL*IKN*RCKKRNY*EQERAGKLPRRPNLPGS-----KNWGEQHSQWPYPI*NMKGQSYGKDTGLQLKHIQHLAHSPKRKRTGPPNS 738
            L + +G +LGEG+GATMS+DEDDL M                  GFGPLLPTE+ERSLMER    ++   + G        K R    +E   +  R   LPG      KNW +QH +WPYP  + K +   ++TGLQLK I +   + +RKR    NS
Sbjct:  133 LHSLTGATLGEGSGATMSEDEDDLQMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGF-------KSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLV-EETGLQLKQINNWFIN-QRKRNWHNNS 282          
BLAST of EY735171 vs. ExPASy Swiss-Prot
Match: KNAT7_ARATH (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.285e-16
Identity = 63/159 (39.62%), Postives = 83/159 (52.20%), Query Frame = 1
Query:  286 LCTFSGVSLGEGTGATMSDDEDDLHM---XXXXXXXXXXXXXXMGFGPLLPTETERSLMERS*TGVED*TETGL*IKN*RCKKRNY*EQERAGKLPRRPNLPGS-----KNWGEQHSQWPYPI*NMKGQSYGKDTGLQLKHIQHLAHSPKRKRTGPPNS 738
            L + +G +LGEG+GATMS+DEDDL M                  GFGPLLPTE+ERSLMER    ++   + G        K R    +E   +  R   LPG      KNW +QH +WPYP  + K +   ++TGLQLK I +   + +RKR    NS
Sbjct:  130 LHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGF-------KSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLV-EETGLQLKQINNWFIN-QRKRNWHNNS 279          
BLAST of EY735171 vs. ExPASy Swiss-Prot
Match: KNAT4_ARATH (Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4 PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 2.702e-15
Identity = 60/152 (39.47%), Postives = 82/152 (53.95%), Query Frame = 1
Query:  286 LCTFSGVSLGEGTGATMSDDEDDLHMXXXXXXXXXXXXXXMGFGPLLPTETERSLMERS*TGVED*TETGL*IKN*RCKKRNY*EQERAGKLPRRPNLPGSKNWGEQHSQWPYPI*NMKGQSYGKDTGLQLKHIQH-LAHSPKRKRTGPPNS 738
            L +F+GVS GEGTGATMS+DED+                 +GFGPL+PTE+ERSLMER    ++   + G   K    ++     + RAGKLP        K+W + HS+WPYP    K +   ++TGLQLK I +   +  KR     P+S
Sbjct:  227 LQSFTGVSPGEGTGATMSEDEDE--QVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEIL-RKRRAGKLP-GDTTSVLKSWWQSHSKWPYPTEEDKARLV-QETGLQLKQINNWFINQRKRNWHSNPSS 373          
BLAST of EY735171 vs. ExPASy Swiss-Prot
Match: KNAP3_MALDO (Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.608e-15
Identity = 65/167 (38.92%), Postives = 86/167 (51.50%), Query Frame = 1
Query:  286 LCTFSGVSLGEGTGATMSDDEDD-LHMXXXXXXXXXXXXXXMGFGPLLPTETERSLMERS*TGVED*TETGL*IKN*RCKKRNY*EQERAGKLPRRPNLPGSKNWGEQHSQWPYPI*NMKGQSYGKDTGLQLKHIQHLAHSPKRKRTGPPNSQFGDVF*RQTAKRKK 783
            L + +GVS GEGT ATMSDDEDD +                MGFGPL+PTE+ERSLMER    ++   + G   K    ++     + RAGKLP        K W + HS+WPYP    K +   ++TGLQLK I +   + +RKR    N     V     +KRK+
Sbjct:  268 LQSLTGVSPGEGTSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEIL-RKRRAGKLP-GDTTSVLKAWWQSHSKWPYPTEEDKARLV-QETGLQLKQINNWFIN-QRKRNWHSNPSTSTVL---KSKRKR 427          
BLAST of EY735171 vs. ExPASy Swiss-Prot
Match: KNOS3_ORYSJ (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica GN=HOS66 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.861e-15
Identity = 60/154 (38.96%), Postives = 81/154 (52.60%), Query Frame = 1
Query:  298 SGVSLGEGTGATMSDDEDDLH-MXXXXXXXXXXXXXXMGFGPLLPTETERSLMERS*TGVED*TETGL*IKN*RCKKRNY*EQERAGKLPRRPNLPGS-----KNWGEQHSQWPYPI*NMKGQSYGKDTGLQLKHIQHLAHSPKRKRTGPPNSQ 741
            +G +L EGTGATMS+DED+   M              MGFGPL+PT++ERSLMER    ++   + G        K R    +E   +  R   LPG      K W +QHS+WPYP  + K +   ++TGLQLK I +   + +RKR    NSQ
Sbjct:  160 TGATLEEGTGATMSEDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGF-------KSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLV-EETGLQLKQINNWFIN-QRKRNWHNNSQ 304          
BLAST of EY735171 vs. ExPASy Swiss-Prot
Match: LET12_SOLLC (Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum GN=LET12 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.751e-14
Identity = 56/137 (40.88%), Postives = 74/137 (54.01%), Query Frame = 1
Query:  286 LCTFSGVSLGEGTGATMSDDEDD-LHMXXXXXXXXXXXXXXMGFGPLLPTETERSLMERS*TGVED*TETGL*IKN*RCKKRNY*EQERAGKLPRRPNLPGSKNWGEQHSQWPYPI*NMKGQSYGKDTGLQLKHIQH 693
            L + +GV+ GEGTGATMSDD+DD                  MGFGPL+PTE+ERSLMER    ++   + G   K    ++     + RAGKLP        K W + HS+WPYP    K +   ++TGLQLK I +
Sbjct:  265 LQSLTGVAPGEGTGATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEIL-RKRRAGKLP-GDTTSVLKAWWQSHSKWPYPTEEDKARLV-QETGLQLKQINN 398          
BLAST of EY735171 vs. ExPASy Swiss-Prot
Match: KNAT3_ARATH (Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.901e-14
Identity = 59/152 (38.82%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  286 LCTFSGVSLGEGTGATMSDDEDDLHMXXXXXXXXXXXXXXMGFGPLLPTETERSLMERS*TGVED*TETGL*IKN*RCKKRNY*EQERAGKLPRRPNLPGSKNWGEQHSQWPYPI*NMKGQSYGKDTGLQLKHIQH-LAHSPKRKRTGPPNS 738
            L + +GVS GEG GATMSDDED+                 +GFGPL+PTE+ERSLMER    ++   + G   K    ++     + RAGKLP        K W + HS+WPYP    K +   ++TGLQLK I +   +  KR     P+S
Sbjct:  263 LQSLTGVSPGEGMGATMSDDEDE--QVESDANMFDGGLDVLGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEIL-RKRRAGKLP-GDTTSVLKAWWQSHSKWPYPTEEDKARLV-QETGLQLKQINNWFINQRKRNWHSNPSS 409          
BLAST of EY735171 vs. ExPASy Swiss-Prot
Match: KNOS2_ORYSJ (Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica GN=HOS58 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.313e-13
Identity = 54/136 (39.71%), Postives = 73/136 (53.68%), Query Frame = 1
Query:  286 LCTFSGVSLGEGTGATMSDDEDDLHMXXXXXXXXXXXXXXMGFGPLLPTETERSLMERS*TGVED*TETGL*IKN*RCKKRNY*EQERAGKLPRRPNLPGSKNWGEQHSQWPYPI*NMKGQSYGKDTGLQLKHIQH 693
            L + +G S GEGTGATMSDDED+                 MGFGPL+ TE ERSL+ER    +++  + G   K    ++     + RAGKLP        K W + HS+WPYP  + K +   ++TGLQLK I +
Sbjct:  144 LQSLTGASPGEGTGATMSDDEDNQVDSEANMFDGNDGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKLVDIREEIL-RKRRAGKLP-GDTASILKAWWQAHSKWPYPTEDDKARLV-QETGLQLKQINN 276          
BLAST of EY735171 vs. ExPASy Swiss-Prot
Match: KNAT5_ARATH (Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.313e-13
Identity = 61/167 (36.53%), Postives = 79/167 (47.31%), Query Frame = 1
Query:  286 LCTFSGVSLGEGTGATMSDDEDDLHMXXXXXXXXXXXXXX---MGFGPLLPTETERSLMERS*TGVED*TETGL*IKN*RCKKRNY*EQERAGKLPRRPNLPGSKNWGEQHSQWPYPI*NMKGQSYGKDTGLQLKHIQHLAHSPKRKRTGPPNSQFGDVF*RQTAKR 777
            L + +GVS  E  G TMSDDEDD  +                 MGFGPL+PTE ERSLMER    ++   + G   K    ++     + RAGKLP        K W   HS+WPYP    K +   ++TGLQLK I +   + +RKR    NS       +   KR
Sbjct:  217 LQSLTGVSPSESNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQGFKEKIVDIREEIM-RKRRAGKLP-GDTTSVLKEWWRTHSKWPYPTEEDKAKLV-QETGLQLKQINNWFIN-QRKRNWNSNSSTSSTLTKNKRKR 379          
BLAST of EY735171 vs. ExPASy Swiss-Prot
Match: KNOSB_ORYSJ (Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica GN=HOS59 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.769e-12
Identity = 60/167 (35.93%), Postives = 81/167 (48.50%), Query Frame = 1
Query:  286 LCTFSGVSLGEGTGATMSDDEDDLHMXXXXXXXXXXXXXXMGFGPLLPTETERSLMERS*TGVED*TETGL*IKN*RCKKRNY*EQERAGKLPRRPNLPGSKNWGEQHSQWPYPI*NMKGQSYGKDTGLQLKHIQH-LAHSPKRKRTGPPNSQFGDVF*RQTAKRKK 783
            L + +G S  EG+GATMSDDED+                 MGFGPL+ TE ERSL+ER    ++   + G   K    ++     + RAGKLP        K W + HS+WPYP    K +   ++TGLQLK I +   +  KR     P S   D      +KRK+
Sbjct:  153 LQSLTGASPREGSGATMSDDEDNQVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIREEIL-RKRRAGKLP-GDTASTLKAWWQAHSKWPYPTEEDKARLV-QETGLQLKQINNWFINQRKRNWHSNPASSSSD-----KSKRKR 311          
The following BLAST results are available for this feature:
BLAST of EY735171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
HD1_BRANA5.444e-1639.62Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2... [more]
KNAT7_ARATH9.285e-1639.62Homeobox protein knotted-1-like 7 OS=Arabidopsis t... [more]
KNAT4_ARATH2.702e-1539.47Homeobox protein knotted-1-like 4 OS=Arabidopsis t... [more]
KNAP3_MALDO4.608e-1538.92Homeobox protein knotted-1-like 3 OS=Malus domesti... [more]
KNOS3_ORYSJ7.861e-1538.96Homeobox protein knotted-1-like 3 OS=Oryza sativa ... [more]
LET12_SOLLC1.751e-1440.88Homeobox protein knotted-1-like LET12 OS=Solanum l... [more]
KNAT3_ARATH3.901e-1438.82Homeobox protein knotted-1-like 3 OS=Arabidopsis t... [more]
KNOS2_ORYSJ4.313e-1339.71Homeobox protein knotted-1-like 2 OS=Oryza sativa ... [more]
KNAT5_ARATH4.313e-1336.53Homeobox protein knotted-1-like 5 OS=Arabidopsis t... [more]
KNOSB_ORYSJ4.769e-1235.93Homeobox protein knotted-1-like 11 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-102-C12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735171 ID=EY735171; Name=EY735171; organism=Citrus sinensis; type=EST; length=856bp
CGGCCCCGGAATTCCCCGGTCCACCCACCCGTCCGAAGATACTTACAAAA
ACACCTTTTAATTCCATGAGGAAGCACTTCACTTCACATATTTTGTTAAC
TTTTTTATGTTCGGAAAATCCAATTAAAAAACCAGGGAACCTCATTGGGC
TTCGAAGGGAGCTCCACTGTCACCGCTGGGCCTAATGGACTACTTTTACG
AAGCTTGGCTAACTTGGCCCAGAAAACACACTGATCCATTTATCATTGAG
ACTTGAGATGGCTCGATAATGCTTTTTCCATGCGCTTATGTACGTTTTCA
GGAGTATCATTGGGTGAAGGGACAGGCGCAACAATGTCTGACGATGAGGA
TGACCTACATATGGATTTCTCTCTTGATCACTCTGCTTCTGATAGTCATG
ATTTGATGGGTTTTGGTCCATTACTTCCTACTGAAACTGAAAGGTCTCTT
ATGGAAAGAAGTTAGACAGGAGTTGAAGATTGAACTGAAACAGGGCTTTA
AATCAAAAATTGAAGATGTAAGAAAAGAAACTATTGAGAACAAGAAAGGG
CCGGAAAATTGCCCCGGCGACCCAACCTTCCGGGCTCCAAGAATTGGGGG
GAACAACACTCCCAATGGCCCTACCCCATCTGAAACATGAAAGGGCAAAG
CTATGGGAAGGACACCGGTTTGCAACTAAAACACATCCAACACCTGGCTC
ATTCACCCAAAAGGAAACGCACCGGGCCCCCCAACTCCCAATTTGGGGAC
GTCTTTTAACGTCAAACTGCAAAAAGGAAAAAAGACATCCCCAATTCTTT
TCTTCGCCAAAAATAAATGGAAGACAAAACAATGAAACGTCACACCCCCT
TTCCCT
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