EY735169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735169 vs. ExPASy Swiss-Prot
Match: HMCS_ARATH (Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis thaliana GN=HMGS PE=2 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.899e-42 Identity = 80/100 (80.00%), Postives = 95/100 (95.00%), Query Frame = 2 Query: 2 PVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFMFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKV 301 PVVDGKLSQTCYLMALD+CYK LC+K+EK+EGK+FS+++ADY +FHSPYNKLVQKSFARLL+NDF+RNASS+DEAAKEK P+S+L+ DESYQSRDLEKV Sbjct: 202 PVVDGKLSQTCYLMALDSCYKHLCNKFEKIEGKEFSINDADYIVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLTLDESYQSRDLEKV 301
BLAST of EY735169 vs. ExPASy Swiss-Prot
Match: HMCSA_DICDI (Hydroxymethylglutaryl-CoA synthase A OS=Dictyostelium discoideum GN=hgsA PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.464e-18 Identity = 46/99 (46.46%), Postives = 61/99 (61.62%), Query Frame = 2 Query: 2 PVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFMFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 298 P VDGKLS +CY A+D CY +EK GK FSL D+ +FHSPYNKLVQKSF R+L+NDF+ N + A+ E + + +++Y LEK Sbjct: 204 PRVDGKLSISCYFRAIDNCYNRYAKAFEKKYGKSFSLDQVDFALFHSPYNKLVQKSFGRMLYNDFLNNPNDSRYASLE---AYKNVKPEDTYFDSVLEK 299
BLAST of EY735169 vs. ExPASy Swiss-Prot
Match: HMCSB_DICDI (Hydroxymethylglutaryl-CoA synthase B OS=Dictyostelium discoideum GN=hgsB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.564e-18 Identity = 51/112 (45.54%), Postives = 72/112 (64.29%), Query Frame = 2 Query: 2 PVVDGKLSQTCYLMALDTCYKCLCSKYEKL-EGKQFSLSNADYFMFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLS-GDESYQSRDLEKVCFEP*LQLFK 331 P VDGKLS CYL ALD CY K+E + + +FS+ + DY FHSPYN+LVQKS+ARL++NDF++N ++ + L PF LS G +SY + L+++ + L FK Sbjct: 204 PYVDGKLSIECYLRALDKCYLEYKKKFESINDDNKFSMDSFDYVCFHSPYNRLVQKSYARLIYNDFLQNPNN---PKYQDLLPFKDLSTGKDSYINSKLDQITLKLSLDDFK 312
BLAST of EY735169 vs. ExPASy Swiss-Prot
Match: HMCS2_BLAGE (Hydroxymethylglutaryl-CoA synthase 2 OS=Blattella germanica GN=HMGCS-2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.267e-18 Identity = 53/117 (45.30%), Postives = 66/117 (56.41%), Query Frame = 2 Query: 2 PVVDGKLSQTCYLMALDTCYKCLCSKYEKL------EGKQFSLSNADYFMFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVCFEP*LQLFKK 334 PVVDGKLS CYL ALD CY CSK EK E + L D F+FHSPY KLVQKS ARL+ NDF++ + L L +++Y RD+EK+ + QLF+K Sbjct: 204 PVVDGKLSVQCYLSALDHCYPRFCSKTEKYLKRCGKENTKIDLDYFDAFVFHSPYCKLVQKSVARLVLNDFIQYPEKYQD-----LQQLRNLKFEDTYFDRDIEKIFMDKSKQLFEK 315
BLAST of EY735169 vs. ExPASy Swiss-Prot
Match: HMCS1_BLAGE (Hydroxymethylglutaryl-CoA synthase 1 OS=Blattella germanica GN=HMGCS-1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.619e-17 Identity = 44/99 (44.44%), Postives = 60/99 (60.61%), Query Frame = 2 Query: 2 PVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFMFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 298 P VDGKLS CYL ALD CY+ CSK +K G++F + D +FH+PY KLVQKS ARL+ NDF+R + L + +++Y R++EK Sbjct: 201 PTVDGKLSIQCYLSALDHCYQLYCSKIQKQLGEKFDIERLDAVLFHAPYCKLVQKSLARLVLNDFVRASEEERTTKYSSLEALKGVKLEDTYFDREVEK 299
BLAST of EY735169 vs. ExPASy Swiss-Prot
Match: HMCS1_PONAB (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Pongo abelii GN=HMGCS1 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17 Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 2 Query: 2 PVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFSLSNADYFMFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVCFEP*LQLFKK 334 P+VDGKLS CYL ALD CY C K + EG K F+L++ + +FHSPY KLVQKS AR+L NDF+ + + + L F + +++Y RD+EK + +LF + Sbjct: 214 PIVDGKLSIQCYLSALDRCYSVYCKKIRAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQ 329
BLAST of EY735169 vs. ExPASy Swiss-Prot
Match: HMCS1_HUMAN (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Homo sapiens GN=HMGCS1 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17 Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 2 Query: 2 PVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFSLSNADYFMFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVCFEP*LQLFKK 334 P+VDGKLS CYL ALD CY C K + EG K F+L++ + +FHSPY KLVQKS AR+L NDF+ + + + L F + +++Y RD+EK + +LF + Sbjct: 214 PIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQ 329
BLAST of EY735169 vs. ExPASy Swiss-Prot
Match: HMCS2_RAT (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus GN=Hmgcs2 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.035e-17 Identity = 45/116 (38.79%), Postives = 67/116 (57.76%), Query Frame = 2 Query: 2 PVVDGKLSQTCYLMALDTCYKCLCSKYEKL-----EGKQFSLSNADYFMFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVCFEP*LQLFKK 334 P+VDGKLS CYL ALD CY K + + F+L + Y +FH+P+ K+VQKS ARL+FNDF+ ++S + L F L +E+Y ++D++K + L +F K Sbjct: 251 PLVDGKLSIQCYLRALDRCYAAYRRKIQNQWKQAGNNQPFTLDDVQYMIFHTPFCKMVQKSLARLMFNDFLSSSSDKQNNLYKGLEAFKGLKLEETYTNKDVDKALLKASLDMFNK 366
BLAST of EY735169 vs. ExPASy Swiss-Prot
Match: HMCS2_BOVIN (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Bos taurus GN=HMGCS2 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.370e-16 Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 2 Query: 2 PVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ------FSLSNADYFMFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVCFEP*LQLFKK 334 P+VDGKLS CYL ALD CY K EK + KQ F+L + Y +FH+P+ KLVQKS ARL+FNDF+ + + L F L +++Y ++D++K + L +F K Sbjct: 251 PLVDGKLSIQCYLRALDKCYAFYRQKIEK-QWKQAGIDRPFTLDDVQYMIFHTPFCKLVQKSLARLMFNDFLLASGDTQTGIYKGLEAFRGLKLEDTYTNKDVDKAFLKASLNMFNK 366
BLAST of EY735169 vs. ExPASy Swiss-Prot
Match: HMCS2_MOUSE (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Mus musculus GN=Hmgcs2 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.338e-16 Identity = 44/116 (37.93%), Postives = 67/116 (57.76%), Query Frame = 2 Query: 2 PVVDGKLSQTCYLMALDTCYKCLCSKYEKL-----EGKQFSLSNADYFMFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVCFEP*LQLFKK 334 P+VDGKLS CYL ALD CY K + + F+L + Y +FH+P+ K+VQKS ARL+FNDF+ ++S + L F L +E+Y ++D++K + L +F + Sbjct: 251 PLVDGKLSIQCYLRALDRCYAAYRKKIQNQWKQAGNNQPFTLDDVQYMIFHTPFCKMVQKSLARLMFNDFLSSSSDKQNNLYKGLEAFRGLKLEETYTNKDVDKALLKASLDMFNQ 366 The following BLAST results are available for this feature:
BLAST of EY735169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735169 ID=EY735169; Name=EY735169; organism=Citrus sinensis; type=EST; length=829bpback to top |