EY735164

Overview
NameEY735164
Unique NameEY735164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735164 vs. ExPASy Swiss-Prot
Match: ZDS_TARER (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes erecta PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.139e-76
Identity = 148/204 (72.55%), Postives = 166/204 (81.37%), Query Frame = 2
Query:    2 VKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIITRVAKQVLALFPSSQGLKVIW---VVCCQNRAIFVP*RDLVKTPFNLIKRPLGKNSSLLAHIPKQDYL 604
            V GLAMSKAT K++V+AD Y+AACDVPGIKRLLPS+WRE +FF+NIY LVGVPVVTVQLRYNGWVTELQD+ERSRQLR+A GLDNLLYTPDADFSCFADLAL SPEDYY EGQGSLLQCVLTPGDPYMPLPN+EII+RV+KQVLALFPSSQGL+V W   V   Q+     P +D    PF   ++   KN  L     KQDY+
Sbjct:  340 VTGLAMSKATQKQIVKADVYIAACDVPGIKRLLPSNWREWEFFDNIYKLVGVPVVTVQLRYNGWVTELQDVERSRQLRQAAGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVSKQVLALFPSSQGLEVTWSSVVKIGQSLYREGPGKD----PFRPDQKTPVKNFFLAGSYTKQDYI 539          
BLAST of EY735164 vs. ExPASy Swiss-Prot
Match: ZDS_SOLLC (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=ZDS PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.386e-75
Identity = 146/202 (72.28%), Postives = 163/202 (80.69%), Query Frame = 2
Query:    2 VKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIITRVAKQVLALFPSSQGLKVIW-VVCCQNRAIFVP*RDLVKTPFNLIKRPLGKNSSLLAHIPKQDYL 604
            V GLAMSKAT KK+V+ADAYVAACDVPGIKRL+P  WRE++FF+NIY LVGVPVVTVQLRYNGWVTELQDLERSRQL+RA GLDNLLYTPDADFSCFADLAL SP+DYY EGQGSLLQCVLTPGDPYMPL NDEII RV KQVLALFPSSQGL+V W  V    ++++       K PF   ++   +N  L     KQDY+
Sbjct:  337 VSGLAMSKATQKKIVKADAYVAACDVPGIKRLVPQKWRELEFFDNIYKLVGVPVVTVQLRYNGWVTELQDLERSRQLKRAAGLDNLLYTPDADFSCFADLALASPDDYYIEGQGSLLQCVLTPGDPYMPLSNDEIIKRVTKQVLALFPSSQGLEVTWSSVLKIGQSLYR--EGPGKDPFRPDQKTPVENFFLAGSYTKQDYI 536          
BLAST of EY735164 vs. ExPASy Swiss-Prot
Match: ZDS_CAPAN (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=ZDS PE=1 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 8.985e-75
Identity = 146/204 (71.57%), Postives = 162/204 (79.41%), Query Frame = 2
Query:    2 VKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIITRVAKQVLALFPSSQGLKVIW---VVCCQNRAIFVP*RDLVKTPFNLIKRPLGKNSSLLAHIPKQDYL 604
            V GLAMSKAT KK+V+ADAYVAAC VPGIKRL+P  WRE++FF NIY L+GVPVVTVQLRYNGWVTELQDLERSRQ +RA GLDNLLYTPDADFSCFADLAL SPEDYY EGQGSLLQCVLTPGDPYMPLPN+EII RV+KQVLALFPSSQGL+V W   V   Q+     P +D    PF   ++   +N  L     KQDY+
Sbjct:  337 VSGLAMSKATQKKIVKADAYVAACVVPGIKRLVPQKWRELEFFGNIYKLIGVPVVTVQLRYNGWVTELQDLERSRQSKRATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIRRVSKQVLALFPSSQGLEVTWSSVVKIGQSLYREGPGKD----PFRPDQKTPVENFFLAGSYTKQDYI 536          
BLAST of EY735164 vs. ExPASy Swiss-Prot
Match: ZDS_NARPS (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.873e-72
Identity = 141/204 (69.12%), Postives = 161/204 (78.92%), Query Frame = 2
Query:    2 VKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIITRVAKQVLALFPSSQGLKVIW---VVCCQNRAIFVP*RDLVKTPFNLIKRPLGKNSSLLAHIPKQDYL 604
            + G+AMSKAT+KK+V+AD YVAACDVPGIKRL+PS WRE   F+NIY LVGVPVVTVQLRYNGWVTE+QDLE+SRQLR A+GLDNLLYTPDADFSCF+DLAL+SPEDYY EGQGSL+Q VLTPGDPYMPLPND II RV KQVL LFPSSQGL+V+W   V   Q+     P +D    PF   ++   KN  L     KQDY+
Sbjct:  322 ITGIAMSKATNKKLVKADVYVAACDVPGIKRLIPSEWREWDLFDNIYKLVGVPVVTVQLRYNGWVTEMQDLEKSRQLRAAVGLDNLLYTPDADFSCFSDLALSSPEDYYIEGQGSLIQAVLTPGDPYMPLPNDAIIERVRKQVLDLFPSSQGLEVLWSSVVKIGQSLYREGPGKD----PFRPDQKTPVKNFFLAGSYTKQDYI 521          
BLAST of EY735164 vs. ExPASy Swiss-Prot
Match: ZDS_ARATH (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=ZDS1 PE=2 SV=3)

HSP 1 Score: 266.159 bits (679), Expect = 1.754e-70
Identity = 137/204 (67.16%), Postives = 158/204 (77.45%), Query Frame = 2
Query:    2 VKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIITRVAKQVLALFPSSQGLKVIW---VVCCQNRAIFVP*RDLVKTPFNLIKRPLGKNSSLLAHIPKQDYL 604
            V GLA+SKAT+KK+V+AD YVAACDVPGIKRLLP  WRE +FFN+IY L GVPVVTVQLRYNGWVTELQD+E +RQL+RA+GLDNLLYTPDADFSCFADLAL SP DYY EGQG+LLQCVLTPGDPYM +PND+II +VA QV  LFPSS+GL+V W   V   Q+     P +D    PF   ++   KN  L     KQDY+
Sbjct:  314 VTGLAISKATNKKIVKADVYVAACDVPGIKRLLPKEWRESRFFNDIYELEGVPVVTVQLRYNGWVTELQDIELARQLKRAVGLDNLLYTPDADFSCFADLALASPADYYIEGQGTLLQCVLTPGDPYMRMPNDKIIEKVAMQVTELFPSSRGLEVTWSSVVKIAQSLYREAPGKD----PFRPDQKTPIKNFFLAGSYTKQDYI 513          
BLAST of EY735164 vs. ExPASy Swiss-Prot
Match: ZDS_MAIZE (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.939e-69
Identity = 135/204 (66.18%), Postives = 160/204 (78.43%), Query Frame = 2
Query:    2 VKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIITRVAKQVLALFPSSQGLKVIW---VVCCQNRAIFVP*RDLVKTPFNLIKRPLGKNSSLLAHIPKQDYL 604
            VKGL ++KAT +++++ADAYVAACDVPGIKRLLPS WRE + F+NIY L GVPVVTVQLRYNGWVTELQDLE+SRQL+RA+GLDNLLYT DADFSCF+DLAL+SP DYY EGQGSL+Q VLTPGDPYMPLPN+EII++V KQV+ LFPSS+GL+V W   V   Q+     P  D    PF   ++   KN  L     KQDY+
Sbjct:  322 VKGLLLTKATSREIIKADAYVAACDVPGIKRLLPSEWREWEMFDNIYKLDGVPVVTVQLRYNGWVTELQDLEKSRQLQRAVGLDNLLYTADADFSCFSDLALSSPADYYIEGQGSLIQAVLTPGDPYMPLPNEEIISKVQKQVVELFPSSRGLEVTWSSVVKIGQSLYREAPGND----PFRPDQKTPVKNFFLSGSYTKQDYI 521          
BLAST of EY735164 vs. ExPASy Swiss-Prot
Match: ZDS_ANASP (Zeta-carotene desaturase OS=Anabaena sp. (strain PCC 7120) GN=crtQ PE=3 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 1.175e-56
Identity = 96/157 (61.15%), Postives = 119/157 (75.80%), Query Frame = 2
Query:    2 VKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIITRVAKQVLALFPSSQGLKVIW 472
            V G+ ++K  + + + ADAYV ACD+PGI+R+LP  WR+   F+NIY L  VPV TVQ+R++GWVTELQD  + +QL+ A GLDNLLYT DADFSCFADLALTSP DYYR+GQGSLLQ VLTPGDP++   N+ I   V KQV  LFPSS+ L + W
Sbjct:  257 VTGIVVAKGDEVEEITADAYVCACDIPGIQRVLPQEWRKWSEFDNIYKLDAVPVATVQMRFDGWVTELQDENKRKQLKEAAGLDNLLYTADADFSCFADLALTSPSDYYRQGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQVYELFPSSRELNMTW 413          

HSP 2 Score: 35.4242 bits (80), Expect = 1.175e-56
Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 1
Query:  511 KGPGKDPFQPD*KTPGKKFFLAGSYTK 591
            + PG D ++P+ KTP   FFLAGSYT+
Sbjct:  426 EAPGMDVYRPNQKTPIANFFLAGSYTQ 452          

HSP 3 Score: 23.483 bits (49), Expect = 1.175e-56
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  477 SVVKIGQSLYRE 512
            SVVK+ QSLYRE
Sbjct:  415 SVVKLAQSLYRE 426          
BLAST of EY735164 vs. ExPASy Swiss-Prot
Match: ZDS_SYNY3 (Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803) GN=crtQ PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.638e-55
Identity = 101/158 (63.92%), Postives = 118/158 (74.68%), Query Frame = 2
Query:    2 VKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWR-EMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIITRVAKQVLALFPSSQGLKVIW 472
            V GL ++   + K V ADAYVAACDVPGIK LLP +WR +  FFN IY L  VPV TVQLR++GWVTE+ D  + +QL +A GLDNLLYT DA+FSCFADLALTSP DYYR G+GSLLQ VLTPGDP+M   N+ I  RV KQV ALFPS+  L + W
Sbjct:  257 VTGLIINDGVETKTVTADAYVAACDVPGIKNLLPENWRTQWDFFNKIYYLDTVPVATVQLRFDGWVTEMNDPAKRKQLEQAFGLDNLLYTSDAEFSCFADLALTSPADYYRPGEGSLLQLVLTPGDPFMKESNEAIAYRVLKQVKALFPSAADLNMTW 414          

HSP 2 Score: 33.4982 bits (75), Expect = 1.638e-55
Identity = 15/27 (55.56%), Postives = 18/27 (66.67%), Query Frame = 1
Query:  511 KGPGKDPFQPD*KTPGKKFFLAGSYTK 591
            + PG D F+P   TP   FFLAGSYT+
Sbjct:  427 EAPGMDLFRPSQATPIANFFLAGSYTQ 453          

HSP 3 Score: 23.0978 bits (48), Expect = 1.638e-55
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  477 SVVKIGQSLYRE 512
            SV+K+ QSLYRE
Sbjct:  416 SVIKLAQSLYRE 427          
BLAST of EY735164 vs. ExPASy Swiss-Prot
Match: CRTI_SOLLC (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=PDS PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 7.730e-15
Identity = 44/139 (31.65%), Postives = 74/139 (53.24%), Query Frame = 2
Query:   29 TDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIITRVAKQVLALFP 445
            +D   ++ DA+V A  V   K LLP  W+E+ +F  +  LVGVPV+ V + ++            R+L+     D+LL++  +  S +AD+++T  E YY   Q S+L+ V  P + ++   + EII    K++  LFP
Sbjct:  366 SDGSAIEGDAFVFAAPVDIFKLLLPEDWKEIPYFQKLEKLVGVPVINVHIWFD------------RKLKNT--YDHLLFSRSSLLSVYADMSVTCKE-YYNPNQ-SMLELVFAPAEEWISRSDSEIIDATMKELATLFP 488          

HSP 2 Score: 28.4906 bits (62), Expect = 7.730e-15
Identity = 12/25 (48.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:  517 PGKDPFQPD*KTPGKKFFLAGSYTK 591
            PG +P +P  ++P + F+LAG YTK
Sbjct:  517 PGCEPCRPLQRSPIEGFYLAGDYTK 541          
BLAST of EY735164 vs. ExPASy Swiss-Prot
Match: CRTI_SYNE7 (Phytoene dehydrogenase OS=Synechococcus elongatus (strain PCC 7942) GN=pds PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.704e-14
Identity = 40/145 (27.59%), Postives = 76/145 (52.41%), Query Frame = 2
Query:   11 LAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIITRVAKQVLALFP 445
            +A  K  ++++++ADAYV+A  V  +K LLP +W+ M +F  +  L GVPV+ + L ++               R+   +D+LL++     S +AD++ T  E  Y +   S+L+ V  P   ++   +++I+     ++  LFP
Sbjct:  253 IAGIKGQEEQLIEADAYVSALPVDPLKLLLPDAWKAMPYFQQLDGLQGVPVINIHLWFD---------------RKLTDIDHLLFSRSPLLSVYADMSNTCRE--YEDPDRSMLELVFAPAKDWIGRSDEDILAATMAEIEKLFP 380          

HSP 2 Score: 28.8758 bits (63), Expect = 1.704e-14
Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 1
Query:  517 PGKDPFQPD*KTPGKKFFLAGSYT 588
            PG+  ++PD  +P   FFL G YT
Sbjct:  408 PGRQQYRPDQASPIANFFLTGDYT 431          
The following BLAST results are available for this feature:
BLAST of EY735164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
ZDS_TARER2.139e-7672.55Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_SOLLC1.386e-7572.28Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_CAPAN8.985e-7571.57Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_NARPS1.873e-7269.12Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_ARATH1.754e-7067.16Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_MAIZE1.939e-6966.18Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_ANASP1.175e-5661.15Zeta-carotene desaturase OS=Anabaena sp. (strain P... [more]
ZDS_SYNY31.638e-5563.92Zeta-carotene desaturase OS=Synechocystis sp. (str... [more]
CRTI_SOLLC7.730e-1531.65Phytoene dehydrogenase, chloroplastic/chromoplasti... [more]
CRTI_SYNE71.704e-1427.59Phytoene dehydrogenase OS=Synechococcus elongatus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-102-C05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735164 ID=EY735164; Name=EY735164; organism=Citrus sinensis; type=EST; length=865bp
TGTCAAAGGACTTGCCATGTCTAAGGCCACTGACAAGAAGGTTGTGCAAG
CTGATGCATATGTTGCAGCATGTGATGTCCCTGGAATTAAAAGATTGCTT
CCCTCATCATGGAGGGAAATGAAATTTTTCAACAATATTTATGCGCTAGT
TGGAGTTCCTGTTGTCACAGTGCAGCTTAGATACAATGGTTGGGTTACTG
AGTTGCAAGACCTAGAACGGTCAAGGCAATTGAGGCGAGCTCTGGGGTTA
GATAACCTTTTGTATACTCCAGATGCAGATTTCTCTTGCTTTGCAGATCT
AGCACTCACTTCACCAGAAGACTACTACAGAGAAGGGCAAGGTTCATTAC
TCCAATGTGTTTTGACGCCTGGCGATCCTTACATGCCCTTACCAAATGAT
GAAATCATAACGAGAGTGGCAAAGCAGGTTTTAGCTCTATTTCCATCATC
CCAAGGTTTAAAAGTTATTTGGGTCGTCTGTTGTCAAAATCGGGCAATCT
TTGTACCGTGAAGGGACCTGGTAAAGACCCCTTTCAACCTGATTAAAAGA
CCCCTGGGAAAAAATTCTTCCTTGCTGGCTCATATACCAAAACAGGATTA
CTTAAAAAAGAATGGAAGGGACAACTTTTTTTTGGTCAAAACAGCCTTCA
CCTTAATATTGCAATGGCGGGGAAAAAATATCATAACCTCTGCGGACCAC
CTTTTCTTCCCTTTGGACCTCCAACCACCATGTGGCCCGCCCCACCCAAC
ACACACCGAACTAACCCCACCTTCACTGGGTGTTAAACTCATGTTTCTAG
CGCCACCCCCACAAGAATAGGGTTTAATAACAATAATATATGGGACTGGT
TCTATGTTATGGATA
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